Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc07_g06930 Coffea canephora HOM05D007381 ORTHO05D009496 4.2e-178 627.9 307 100.0
Dinv26914 Davidia involucrata HOM05D007381 ORTHO05D009496 6.1e-153 544.3 307 84.0
Dinv30077 Davidia involucrata HOM05D007381 ORTHO05D009496 6.1e-153 544.3 307 84.0
CSS0029250 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 3.0e-152 542.0 307 83.7
Gorai.011G107900 Gossypium raimondii HOM05D007381 ORTHO05D009496 1.2e-151 540.0 307 82.4
CSS0037700 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 3.4e-151 538.5 307 83.1
Gohir.D10G098200 Gossypium hirsutum HOM05D007381 ORTHO05D009496 4.4e-151 538.1 307 82.1
Actinidia16435 Actinidia chinensis HOM05D007381 ORTHO05D009496 5.7e-151 537.7 307 82.7
MELO3C007622.2 Cucumis melo HOM05D007381 ORTHO05D009496 2.8e-150 535.4 307 83.4
COL.COLO4_11553 Corchorus olitorius HOM05D007381 ORTHO05D009496 6.3e-150 534.3 307 81.8
Gohir.A10G089900 Gossypium hirsutum HOM05D007381 ORTHO05D009496 8.3e-150 533.9 307 81.4
Migut.H00360 Erythranthe guttata HOM05D007381 ORTHO05D009496 2.4e-149 532.3 307 82.1
Rhsim08G0094800 Rhododendron simsii HOM05D007381 ORTHO05D009496 5.4e-149 531.2 307 82.7
PGR102G2572 Punica granatum HOM05D007381 ORTHO05D009496 7.0e-149 530.8 307 81.8
HanXRQChr12g0373171 Helianthus annuus HOM05D007381 ORTHO05D009496 2.0e-148 529.3 307 81.4
TAR628G1049 Trochodendron aralioides HOM05D007381 ORTHO05D009496 2.0e-148 529.3 307 81.1
GSVIVG01000134001 Vitis vinifera HOM05D007381 ORTHO05D009496 2.0e-148 529.3 307 81.8
Peaxi162Scf00264g00118 Petunia axillaris HOM05D007381 ORTHO05D009496 3.5e-148 528.5 307 81.4
Thecc.01G070300 Theobroma cacao HOM05D007381 ORTHO05D009496 3.5e-148 528.5 307 81.8
CsaV3_6G043990 Cucumis sativus L. HOM05D007381 ORTHO05D009496 4.5e-148 528.1 307 82.7
Sopen02g037070 Solanum pennellii HOM05D007381 ORTHO05D009496 4.5e-148 528.1 307 82.1
PGSC0003DMG400024934 Solanum tuberosum HOM05D007381 ORTHO05D009496 5.0e-147 524.6 307 81.1
PSO170G6067 Papaver somniferum HOM05D007381 ORTHO05D009496 6.5e-147 524.2 307 79.8
Sed0015462 Sechium edule HOM05D007381 ORTHO05D009496 8.5e-147 523.9 307 81.1
Lsat_1_v5_gn_4_160940 Lactuca sativa HOM05D007381 ORTHO05D009496 1.9e-146 522.7 307 80.8
Solyc02g092510.3 Solanum lycopersicum HOM05D007381 ORTHO05D009496 3.2e-146 521.9 307 81.1
Prupe.6G222900 Prunus persica HOM05D007381 ORTHO05D009496 9.4e-146 520.4 307 80.1
MD00G1015500 Malus domestica HOM05D007381 ORTHO05D009496 1.2e-145 520.0 307 79.8
MD15G1294900 Malus domestica HOM05D007381 ORTHO05D009496 1.6e-145 519.6 307 80.5
CAN.G1075.23 Capsicum annuum HOM05D007381 ORTHO05D009496 2.1e-145 519.2 307 80.5
Eucgr.H02297 Eucalyptus grandis HOM05D007381 ORTHO05D009496 2.7e-145 518.8 307 79.5
Atru.chr3.157 Acer truncatum HOM05D007381 ORTHO05D009496 3.6e-145 518.5 307 80.8
Atru.chr3.186 Acer truncatum HOM05D007381 ORTHO05D009496 3.6e-145 518.5 307 80.8
Aqoxy5G00892 Aquilegia oxysepala HOM05D007381 ORTHO05D009496 6.1e-145 517.7 307 79.8
VMungo1215G2498 Vigna mungo HOM05D007381 ORTHO05D009496 8.0e-145 517.3 307 80.1
Cpa.g.sc6.38 Carica papaya HOM05D007381 ORTHO05D009496 4.0e-144 515.0 307 80.5
Lj4A160G63 Lonicera japonica HOM05D007381 ORTHO05D009496 8.8e-144 513.8 358 71.5
Nn1g04598 Nelumbo nucifera HOM05D007381 ORTHO05D009496 8.8e-144 513.8 307 78.5
RcHm_v2.0_Chr2g0107591 Rosa chinensis HOM05D007381 ORTHO05D009496 1.2e-143 513.5 307 78.5
Lj2g0010288 Lotus japonicus HOM05D007381 ORTHO05D009496 9.8e-143 510.4 307 78.8
arahy.Tifrunner.gnm1.ann1.S5EEEI Arachis hypogaea HOM05D007381 ORTHO05D009496 2.8e-142 508.8 307 77.9
EL10Ac6g15638 Beta vulgaris HOM05D007381 ORTHO05D009496 2.8e-142 508.8 307 76.9
FvH4_1g17400 Fragaria vesca HOM05D007381 ORTHO05D009496 2.8e-142 508.8 307 78.2
Phvul.002G012100 Phaseolus vulgaris HOM05D007381 ORTHO05D009496 4.9e-142 508.1 307 79.2
arahy.Tifrunner.gnm1.ann1.I4PWFV Arachis hypogaea HOM05D007381 ORTHO05D009496 1.8e-141 506.1 307 77.5
Ca_24708_v3 Cicer arietinum L. HOM05D007381 ORTHO05D009496 2.4e-141 505.8 307 77.5
FAN23G1987 Fragaria x ananassa HOM05D007381 ORTHO05D009496 2.4e-141 505.8 307 77.5
Glyma.11G048900 Glycine max HOM05D007381 ORTHO05D009496 4.1e-141 505.0 307 79.2
Manes.12G110400 Manihot esculenta HOM05D007381 ORTHO05D009496 4.1e-141 505.0 307 77.5
ECA232G2614 Erigeron canadensis HOM05D007381 ORTHO05D009496 7.0e-141 504.2 304 78.0
Glyma.01G192900 Glycine max HOM05D007381 ORTHO05D009496 2.7e-140 502.3 307 78.2
Lalb_Chr05g0213621 Lupinus albus HOM05D007381 ORTHO05D009496 5.0e-139 498.0 307 76.9
vmacro17999 Vaccinium macrocarpon HOM05D007381 ORTHO05D009496 6.6e-139 497.7 370 67.8
FAN19G2977 Fragaria x ananassa HOM05D007381 ORTHO05D009496 1.1e-138 496.9 323 74.0
CANSAT01G2210 Cannabis sativa HOM05D007381 ORTHO05D009496 1.9e-138 496.1 307 77.2
Oeu040581.2 Olea europaea HOM05D007381 ORTHO05D009496 1.9e-138 496.1 371 67.4
Ciclev10025991m.g Citrus clementina HOM05D007381 ORTHO05D009496 2.5e-138 495.7 285 81.8
Medtr5g015840 Medicago truncatula HOM05D007381 ORTHO05D009496 7.3e-138 494.2 307 76.5
Lalb_Chr16g0378811 Lupinus albus HOM05D007381 ORTHO05D009496 4.7e-137 491.5 307 76.5
Potri.007G053900 Populus trichocarpa HOM05D007381 ORTHO05D009496 1.8e-136 489.6 307 75.6
ClCG01G017450 Citrullus lanatus HOM05D007381 ORTHO05D009496 3.0e-136 488.8 391 63.9
TPR.G20964 Trifolium pratense HOM05D007381 ORTHO05D009496 2.0e-135 486.1 307 75.2
CDE07G0114 Ceratophyllum demersum HOM05D007381 ORTHO05D009496 9.8e-135 483.8 307 73.6
THA.LOC104819874 Tarenaya hassleriana HOM05D007381 ORTHO05D009496 1.7e-134 483.0 307 73.9
ATR0019G019 Amborella trichopoda HOM05D007381 ORTHO05D009496 2.2e-134 482.6 307 73.3
unitig_899.g14582 Utricularia gibba HOM05D007381 ORTHO05D009496 1.8e-133 479.6 307 73.9
Os07g0588800 Oryza sativa ssp. japonica HOM05D007381 ORTHO05D009496 4.1e-133 478.4 307 71.7
Zm00001eb108230 Zea mays HOM05D007381 ORTHO05D009496 7.0e-133 477.6 306 71.6
SEGI_03968 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 2.3e-131 472.6 306 71.6
DCAR_021466 Daucus carota HOM05D007381 ORTHO05D009496 3.0e-131 472.2 307 74.6
Aa31LG6G14440 Aethionema arabicum HOM05D007381 ORTHO05D009496 5.0e-131 471.5 307 71.0
SGA_v2.0_scaffold15G07431 Striga asiatica HOM05D007381 ORTHO05D009496 5.2e-128 461.5 277 79.1
Nitab4.5_0000651g0120 Nicotiana tabacum HOM05D007381 ORTHO05D009496 2.6e-127 459.1 310 73.5
Cfa004113 Carpinus fangiana HOM05D007381 ORTHO05D009496 1.3e-126 456.8 285 77.5
FAN28G2520 Fragaria x ananassa HOM05D007381 ORTHO05D009496 2.0e-124 449.5 277 76.5
Nitab4.5_0006069g0020 Nicotiana tabacum HOM05D007381 ORTHO05D009496 3.5e-124 448.7 277 77.6
FAN26G1164 Fragaria x ananassa HOM05D007381 ORTHO05D009496 1.0e-123 447.2 276 76.4
TWI73G0080 Tripterygium wilfordii HOM05D007381 ORTHO05D009496 1.3e-123 446.8 307 72.3
Haze_15300 Corylus avellana HOM05D007381 ORTHO05D009496 2.8e-121 439.1 293 74.4
Sabra07G0047100 Salix brachista HOM05D007381 ORTHO05D009496 1.3e-118 430.3 293 71.0
Pp3c18_1320 Physcomitrium patens HOM05D007381 ORTHO05D009496 2.6e-111 406.0 312 61.5
CiPaw.01G006100 Carya illinoinensis HOM05D007381 ORTHO05D009496 3.4e-111 405.6 243 78.6
AagrBONN_evm.TU.Sc2ySwM_362.1621 Anthoceros agrestis HOM05D007381 ORTHO05D009496 4.4e-111 405.2 310 62.6
Hma1.2p1_0730F.1_g209840 Hydrangea macrophylla HOM05D007381 ORTHO05D009496 9.9e-111 404.1 235 82.1
Duzib187G0033 Durio zibethinus HOM05D007381 ORTHO05D009496 2.2e-110 402.9 307 65.8
Mapoly0084s0082 Marchantia polymorpha HOM05D007381 ORTHO05D009496 6.0e-108 394.8 306 61.1
SMO268G0024 Selaginella moellendorffii HOM05D007381 ORTHO05D009496 1.4e-101 373.6 273 63.7
SEGI_30700 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 1.1e-98 364.0 236 72.9
Cre07.g344150 Chlamydomonas reinhardtii HOM05D007381 ORTHO05D009496 2.4e-80 303.1 316 49.4
Hund13939 Selenicereus undatus HOM05D007381 ORTHO05D009496 3.1e-80 302.8 245 63.7
HPP92_026572 Vanilla planifolia HOM05D007381 ORTHO05D009496 9.0e-72 274.6 190 66.3
MCO12G353 Micromonas commoda HOM05D007381 ORTHO05D009496 5.0e-62 242.3 310 43.5
ATR0019G012 Amborella trichopoda HOM05D007381 ORTHO05D009496 3.6e-60 236.1 151 75.5
CSS0032842 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 7.9e-60 235.0 170 73.5
QL06p039803 Quercus lobata HOM05D007381 ORTHO05D009496 2.8e-57 226.5 131 79.4
CBR_g40647 Chara braunii HOM05D007381 ORTHO05D009496 5.9e-55 218.8 565 28.0
PRCOL_00002255 Prasinoderma coloniale HOM05D007381 ORTHO05D009496 7.7e-55 218.4 282 43.3
Ca_17124_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 2.0e-23 114.0 88 65.9
Cfa025505 Carpinus fangiana HOM05D007381 ORTHO05D009496 4.3e-21 106.3 274 29.9
SHI33146 Sapria himalayana HOM05D007381 ORTHO05D009496 4.3e-21 106.3 71 69.0
CBR_g29716 Chara braunii HOM05D007381 ORTHO05D009496 2.8e-20 103.6 96 49.0
Ca_08895_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 5.7e-18 95.9 72 62.5
COL.COLO4_34115 Corchorus olitorius HOM05D007381 ORTHO05D159467 3.2e-08 63.5 58 62.1
Rhsim08G0136300 Rhododendron simsii HOM05D007381 ORTHO05D006450 1.0e-06 58.5 34 76.5


User provided reference genes

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