Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc07_g06140 Coffea canephora HOM05D006615 ORTHO05D007999 3.0e-112 408.7 229 100.0
Oeu014828.1 Olea europaea HOM05D006615 ORTHO05D007999 1.5e-87 326.6 227 78.0
Peaxi162Scf00549g00014 Petunia axillaris HOM05D006615 ORTHO05D007999 3.3e-87 325.5 214 84.1
vmacro05309 Vaccinium macrocarpon HOM05D006615 ORTHO05D007999 4.3e-87 325.1 225 76.9
Rhsim10G0115300 Rhododendron simsii HOM05D006615 ORTHO05D007999 1.8e-85 319.7 225 77.3
Nitab4.5_0002765g0020 Nicotiana tabacum HOM05D006615 ORTHO05D007999 2.4e-85 319.3 214 82.7
Sopen02g037800 Solanum pennellii HOM05D006615 ORTHO05D007999 4.1e-85 318.5 209 85.2
Solyc02g093220.3 Solanum lycopersicum HOM05D006615 ORTHO05D007999 6.9e-85 317.8 209 84.7
PGSC0003DMG400004030 Solanum tuberosum HOM05D006615 ORTHO05D007999 6.9e-85 317.8 209 84.7
MSTRG.2870 Avicennia marina HOM05D006615 ORTHO05D007999 1.2e-84 317.0 227 74.4
Migut.H00418 Erythranthe guttata HOM05D006615 ORTHO05D007999 1.2e-84 317.0 229 78.6
CAN.G370.40 Capsicum annuum HOM05D006615 ORTHO05D007999 1.5e-84 316.6 209 84.7
Nitab4.5_0002694g0020 Nicotiana tabacum HOM05D006615 ORTHO05D007999 3.4e-84 315.5 214 81.8
TAR625G0931 Trochodendron aralioides HOM05D006615 ORTHO05D007999 2.9e-83 312.4 229 72.9
Actinidia12040 Actinidia chinensis HOM05D006615 ORTHO05D007999 8.5e-83 310.8 218 69.7
Nn5g30349 Nelumbo nucifera HOM05D006615 ORTHO05D007999 1.1e-82 310.5 230 73.0
CSS0020579 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 3.2e-82 308.9 224 72.3
Haze_15377 Corylus avellana HOM05D006615 ORTHO05D007999 9.4e-82 307.4 223 75.8
Lsat_1_v5_gn_4_164980 Lactuca sativa HOM05D006615 ORTHO05D007999 2.1e-81 306.2 226 74.3
HanXRQChr09g0263661 Helianthus annuus HOM05D006615 ORTHO05D007999 2.7e-81 305.8 229 74.7
QL06p040870 Quercus lobata HOM05D006615 ORTHO05D007999 2.7e-81 305.8 223 76.7
TAR381G0796 Trochodendron aralioides HOM05D006615 ORTHO05D007999 2.3e-80 302.8 230 73.0
COL.COLO4_11446 Corchorus olitorius HOM05D006615 ORTHO05D007999 1.1e-79 300.4 229 73.4
RcHm_v2.0_Chr2g0105951 Rosa chinensis HOM05D006615 ORTHO05D007999 1.1e-79 300.4 227 74.4
Hma1.2p1_0670F.1_g200450 Hydrangea macrophylla HOM05D006615 ORTHO05D007999 2.6e-79 299.3 225 65.3
Ciclev10026421m.g Citrus clementina HOM05D006615 ORTHO05D007999 3.3e-79 298.9 226 73.0
Prupe.7G131100 Prunus persica HOM05D006615 ORTHO05D007999 3.3e-79 298.9 222 76.6
Oeu049899.1 Olea europaea HOM05D006615 ORTHO05D007999 1.3e-78 297.0 214 77.6
Oeu017456.1 Olea europaea HOM05D006615 ORTHO05D007999 1.7e-78 296.6 227 74.9
FAN26G2627 Fragaria x ananassa HOM05D006615 ORTHO05D007999 3.7e-78 295.4 227 73.6
FAN28G0965 Fragaria x ananassa HOM05D006615 ORTHO05D007999 3.7e-78 295.4 228 74.1
FvH4_1g16240 Fragaria vesca HOM05D006615 ORTHO05D007999 4.8e-78 295.0 227 73.1
FAN23G1998 Fragaria x ananassa HOM05D006615 ORTHO05D007999 4.8e-78 295.0 228 74.1
GSVIVG01022099001 Vitis vinifera HOM05D006615 ORTHO05D007999 4.8e-78 295.0 229 63.8
Atru.chr3.300 Acer truncatum HOM05D006615 ORTHO05D007999 6.3e-78 294.7 228 72.4
Duzib147G0216 Durio zibethinus HOM05D006615 ORTHO05D007999 1.1e-77 293.9 226 72.6
MD02G1174700 Malus domestica HOM05D006615 ORTHO05D007999 1.4e-77 293.5 226 74.3
MD15G1285700 Malus domestica HOM05D006615 ORTHO05D007999 1.8e-77 293.1 226 73.5
Gohir.A02G156700 Gossypium hirsutum HOM05D006615 ORTHO05D007999 2.4e-77 292.7 214 75.2
Gohir.A12G072600 Gossypium hirsutum HOM05D006615 ORTHO05D007999 3.1e-77 292.4 227 72.7
ClCG02G012310 Citrullus lanatus HOM05D006615 ORTHO05D007999 9.1e-77 290.8 227 70.9
Sabra05G0110900 Salix brachista HOM05D006615 ORTHO05D007999 9.1e-77 290.8 224 71.9
Cpa.g.sc55.125 Carica papaya HOM05D006615 ORTHO05D007999 2.0e-76 289.7 215 66.5
CsaV3_2G016460 Cucumis sativus L. HOM05D006615 ORTHO05D007999 2.0e-76 289.7 227 69.6
FAN19G1431 Fragaria x ananassa HOM05D006615 ORTHO05D007999 2.0e-76 289.7 227 72.2
Gorai.003G025500 Gossypium raimondii HOM05D006615 ORTHO05D007999 2.6e-76 289.3 214 74.3
CSS0005072 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 3.5e-76 288.9 224 61.2
Sabra07G0040600 Salix brachista HOM05D006615 ORTHO05D007999 4.5e-76 288.5 225 64.0
CDE02G1946 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 5.9e-76 288.1 228 69.7
Gohir.D12G070500 Gossypium hirsutum HOM05D006615 ORTHO05D007999 5.9e-76 288.1 227 67.4
Gorai.008G077500 Gossypium raimondii HOM05D006615 ORTHO05D007999 5.9e-76 288.1 227 67.4
AUR62001910 Chenopodium quinoa HOM05D006615 ORTHO05D007999 1.0e-75 287.3 223 64.1
Ah.03g145470 Amaranthus hybridus HOM05D006615 ORTHO05D007999 1.3e-75 287.0 217 64.1
MELO3C020856.2 Cucumis melo HOM05D006615 ORTHO05D007999 1.3e-75 287.0 236 67.8
Manes.12G104500 Manihot esculenta HOM05D006615 ORTHO05D007999 1.3e-75 287.0 226 72.1
Thecc.01G059100 Theobroma cacao HOM05D006615 ORTHO05D007999 1.3e-75 287.0 211 75.8
Potri.005G140000 Populus trichocarpa HOM05D006615 ORTHO05D007999 1.7e-75 286.6 224 71.4
Aqoxy5G01194 Aquilegia oxysepala HOM05D006615 ORTHO05D007999 2.2e-75 286.2 223 62.8
Gohir.D03G024000 Gossypium hirsutum HOM05D006615 ORTHO05D007999 2.2e-75 286.2 214 73.8
Sc03g0001700 Simmondsia chinensis HOM05D006615 ORTHO05D007999 2.2e-75 286.2 214 64.5
ATR0800G077 Amborella trichopoda HOM05D006615 ORTHO05D007999 3.8e-75 285.4 224 73.2
DCAR_010880 Daucus carota HOM05D006615 ORTHO05D007999 5.0e-75 285.0 225 71.6
Lj4C151G8 Lonicera japonica HOM05D006615 ORTHO05D007999 5.0e-75 285.0 208 73.6
AUR62003898 Chenopodium quinoa HOM05D006615 ORTHO05D007999 8.5e-75 284.3 223 63.2
Sed0009491 Sechium edule HOM05D006615 ORTHO05D007999 1.1e-74 283.9 227 67.4
CDE04G2757 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 1.9e-74 283.1 228 68.4
Dinv26838 Davidia involucrata HOM05D000573 ORTHO05D000425 3.2e-74 282.3 166 80.1
THA.LOC104821250 Tarenaya hassleriana HOM05D006615 ORTHO05D007999 4.2e-74 282.0 209 75.6
AT5G67140 Arabidopsis thaliana HOM05D006615 ORTHO05D007999 2.7e-73 279.3 211 73.0
ECA232G2507 Erigeron canadensis HOM05D002761 ORTHO05D003351 2.7e-73 279.3 169 78.1
BcaB02g09933 Brassica carinata HOM05D006615 ORTHO05D007999 4.7e-73 278.5 211 72.0
AL8G44220 Arabidopsis lyrata HOM05D006615 ORTHO05D007999 8.0e-73 277.7 211 72.0
PSO170G0414 Papaver somniferum HOM05D006615 ORTHO05D007999 8.0e-73 277.7 233 59.2
BraA07t29407Z Brassica rapa HOM05D006615 ORTHO05D007999 1.4e-72 276.9 211 71.6
Thhalv10004869m.g Eutrema salsugineum HOM05D006615 ORTHO05D007999 2.3e-72 276.2 211 71.1
C07p24600 Brassica napus HOM05D006615 ORTHO05D007999 3.0e-72 275.8 209 72.2
BolC7t42980H Brassica oleracea HOM05D006615 ORTHO05D007999 3.0e-72 275.8 209 72.2
Sp2g29550 Schrenkiella parvula HOM05D006615 ORTHO05D007999 3.9e-72 275.4 208 73.6
A07p16820 Brassica napus HOM05D006615 ORTHO05D007999 5.2e-72 275.0 211 71.1
Cfa004036 Carpinus fangiana HOM05D006615 ORTHO05D007999 5.2e-72 275.0 206 74.3
CARHR280510 Cardamine hirsuta HOM05D006615 ORTHO05D007999 8.8e-72 274.2 211 71.1
Carub.0008s2737 Capsella rubella HOM05D006615 ORTHO05D007999 1.5e-71 273.5 211 70.6
Lalb_Chr16g0378591 Lupinus albus HOM05D006615 ORTHO05D007999 1.5e-71 273.5 212 74.1
PSO210G0040 Papaver somniferum HOM05D006615 ORTHO05D007999 1.5e-71 273.5 233 58.8
Hund16348 Selenicereus undatus HOM05D006615 ORTHO05D007999 1.3e-70 270.4 274 52.9
HPP92_026439 Vanilla planifolia HOM05D006615 ORTHO05D007999 1.3e-70 270.4 211 70.1
Aa31LG1G15650 Aethionema arabicum HOM05D006615 ORTHO05D007999 1.7e-70 270.0 215 68.8
CiPaw.01G016200 Carya illinoinensis HOM05D006615 ORTHO05D007999 2.2e-70 269.6 210 61.0
Medtr5g016890 Medicago truncatula HOM05D006615 ORTHO05D007999 2.8e-70 269.2 210 72.4
TPR.G26907 Trifolium pratense HOM05D006615 ORTHO05D007999 1.4e-69 266.9 210 64.8
Psat2g167840 Pisum sativum HOM05D006615 ORTHO05D007999 3.1e-69 265.8 210 64.8
Lj2g0018871 Lotus japonicus HOM05D006615 ORTHO05D007999 1.6e-68 263.5 205 74.1
Glyma.11G054300 Glycine max HOM05D006615 ORTHO05D007999 2.6e-68 262.7 210 72.4
arahy.Tifrunner.gnm1.ann1.XJ9ES7 Arachis hypogaea HOM05D006615 ORTHO05D007999 5.9e-68 261.5 209 74.2
Phvul.002G017400 Phaseolus vulgaris HOM05D006615 ORTHO05D007999 2.2e-67 259.6 210 70.0
arahy.Tifrunner.gnm1.ann1.8K3JW9 Arachis hypogaea HOM05D006615 ORTHO05D007999 5.0e-67 258.5 209 73.7
Glyma.01G187800 Glycine max HOM05D006615 ORTHO05D007999 2.5e-66 256.1 201 74.1
MELO3C020857.2 Cucumis melo HOM05D006615 ORTHO05D007999 5.5e-66 255.0 216 67.6
CsaV3_2G016470 Cucumis sativus L. HOM05D006615 ORTHO05D007999 5.5e-66 255.0 216 67.6
VMungo1215G1750 Vigna mungo HOM05D006615 ORTHO05D007999 5.5e-66 255.0 210 70.5
Atru.chr3.288 Acer truncatum HOM05D006615 ORTHO05D007999 1.6e-65 253.4 200 71.5
TWI09G1033 Tripterygium wilfordii HOM05D006615 ORTHO05D007999 3.6e-65 252.3 219 55.7
Lalb_Chr05g0213321 Lupinus albus HOM05D006615 ORTHO05D007999 1.4e-64 250.4 212 59.4
Eucgr.H01687 Eucalyptus grandis HOM05D006615 ORTHO05D007999 6.8e-64 248.1 209 57.9
SGA_v2.0_scaffold15G07326 Striga asiatica HOM05D006615 ORTHO05D007999 5.7e-63 245.0 227 69.2
Os06g0166000 Oryza sativa ssp. japonica HOM05D006615 ORTHO05D007999 1.6e-60 236.9 209 56.5
SEGI_10636 Sequoiadendron giganteum HOM05D006615 ORTHO05D007999 5.0e-59 231.9 213 59.6
Actinidia36482 Actinidia chinensis HOM05D006615 ORTHO05D007999 1.6e-57 226.9 198 60.6
Zm00001eb375600 Zea mays HOM05D006615 ORTHO05D007999 6.1e-57 224.9 207 53.6
CANSAT01G0297 Cannabis sativa HOM05D006615 ORTHO05D007999 1.3e-54 217.2 212 54.2
unitig_748.g8604 Utricularia gibba HOM05D002191 ORTHO05D007999 3.6e-49 199.1 166 60.2
Aqoxy6G01271 Aquilegia oxysepala HOM05D006615 ORTHO05D007999 4.4e-47 192.2 225 55.6
Pp3c7_15700 Physcomitrium patens HOM05D006615 ORTHO05D007999 5.7e-47 191.8 210 55.7
AagrBONN_evm.TU.Sc2ySwM_344.5234 Anthoceros agrestis HOM05D006615 ORTHO05D007999 1.1e-45 187.6 217 53.0
Mapoly0005s0095 Marchantia polymorpha HOM05D006615 ORTHO05D007999 1.2e-44 184.1 171 51.5
TWI73G1298 Tripterygium wilfordii HOM05D006615 ORTHO05D007999 3.2e-37 159.5 152 50.0
Potri.007G045601 Populus trichocarpa HOM05D006615 ORTHO05D007999 2.1e-33 146.7 101 74.3
SMO164G0246 Selaginella moellendorffii HOM05D006615 ORTHO05D007999 2.3e-32 143.3 202 48.5
MSTRG.3434 Avicennia marina HOM05D006615 ORTHO05D007999 2.9e-22 109.8 104 75.0
ClCG02G012330 Citrullus lanatus HOM05D006615 ORTHO05D007999 1.4e-13 80.9 81 51.9
EL10Ac6g15726 Beta vulgaris HOM05D006615 ORTHO05D007999 2.5e-10 70.1 155 32.3
Phvul.008G146300 Phaseolus vulgaris HOM05D006615 ORTHO05D007999 7.3e-10 68.6 45 66.7


User provided reference genes

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