Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc07_g05300 Coffea canephora HOM05D007898 ORTHO05D010010 3.1e-87 325.1 162 100.0
PGR142G0285 Punica granatum HOM05D007898 ORTHO05D010010 4.2e-36 155.2 160 56.2
CiPaw.02G014000 Carya illinoinensis HOM05D007898 ORTHO05D010010 2.7e-35 152.5 167 53.3
Cfa004248 Carpinus fangiana HOM05D007898 ORTHO05D010010 3.9e-34 148.7 146 56.2
Hma1.2p1_0261F.1_g104820 Hydrangea macrophylla HOM05D007898 ORTHO05D010010 1.1e-33 147.1 146 56.8
GSVIVG01019045001 Vitis vinifera HOM05D007898 ORTHO05D010010 7.4e-33 144.4 147 54.4
TWI73G0930 Tripterygium wilfordii HOM05D007898 ORTHO05D010010 1.3e-32 143.7 165 52.7
Oeu043831.1 Olea europaea HOM05D007898 ORTHO05D010010 2.2e-32 142.9 168 55.4
CSS0004703 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 8.2e-32 141.0 171 50.3
CSS0023760 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 1.4e-31 140.2 170 50.6
Eucgr.K01101 Eucalyptus grandis HOM05D007898 ORTHO05D010010 2.4e-31 139.4 158 53.2
Migut.K00847 Erythranthe guttata HOM05D007898 ORTHO05D010010 9.1e-31 137.5 148 54.7
QL06p044475 Quercus lobata HOM05D007898 ORTHO05D010010 2.0e-30 136.3 166 48.8
TAR381G0528 Trochodendron aralioides HOM05D007898 ORTHO05D010010 2.6e-30 136.0 148 52.7
RcHm_v2.0_Chr2g0103011 Rosa chinensis HOM05D007898 ORTHO05D010010 2.2e-29 132.9 151 51.7
Manes.12G096600 Manihot esculenta HOM05D007898 ORTHO05D010010 3.8e-29 132.1 171 46.2
Thecc.01G044100 Theobroma cacao HOM05D007898 ORTHO05D010010 6.5e-29 131.3 147 49.7
Dinv26786 Davidia involucrata HOM05D007898 ORTHO05D010010 1.1e-28 130.6 123 61.0
Sabra07G0028800 Salix brachista HOM05D007898 ORTHO05D010010 1.1e-28 130.6 147 51.0
Nitab4.5_0000483g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 2.5e-28 129.4 156 53.2
FAN28G1054 Fragaria x ananassa HOM05D007898 ORTHO05D010010 3.2e-28 129.0 154 49.4
Potri.007G032900 Populus trichocarpa HOM05D007898 ORTHO05D010010 3.2e-28 129.0 164 47.6
Sopen02g034650 Solanum pennellii HOM05D007898 ORTHO05D010010 3.2e-28 129.0 156 51.9
FAN23G0801 Fragaria x ananassa HOM05D007898 ORTHO05D010010 4.2e-28 128.6 154 49.4
Peaxi162Scf00535g00419 Petunia axillaris HOM05D007898 ORTHO05D010010 4.2e-28 128.6 184 45.7
arahy.Tifrunner.gnm1.ann1.P18VIJ Arachis hypogaea HOM05D007898 ORTHO05D010010 5.5e-28 128.3 148 51.4
Nitab4.5_0004932g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 5.5e-28 128.3 156 52.6
PGSC0003DMG400010085 Solanum tuberosum HOM05D007898 ORTHO05D010010 1.2e-27 127.1 159 48.4
CARHR114600 Cardamine hirsuta HOM05D007898 ORTHO05D010010 1.6e-27 126.7 146 50.0
FvH4_1g14340 Fragaria vesca HOM05D007898 ORTHO05D010010 8.0e-27 124.4 154 48.1
AT2G23755 Arabidopsis thaliana HOM05D007898 ORTHO05D010010 3.0e-26 122.5 145 50.3
THA.LOC104819816 Tarenaya hassleriana HOM05D007898 ORTHO05D010010 3.0e-26 122.5 146 49.3
Ah.03g142230 Amaranthus hybridus HOM05D007898 ORTHO05D010010 5.2e-26 121.7 152 46.7
CANSAT01G0863 Cannabis sativa HOM05D007898 ORTHO05D010010 8.8e-26 120.9 171 45.6
AL4G13750 Arabidopsis lyrata HOM05D007898 ORTHO05D010010 1.1e-25 120.6 146 47.9
SalBow1G4022 Salvia bowleyana HOM05D007898 ORTHO05D010010 1.1e-25 120.6 145 49.0
MD15G1271500 Malus domestica HOM05D007898 ORTHO05D010010 2.0e-25 119.8 147 49.7
Prupe.7G146700 Prunus persica HOM05D007898 ORTHO05D010010 3.3e-25 119.0 149 48.3
arahy.Tifrunner.gnm1.ann1.376QVY Arachis hypogaea HOM05D007898 ORTHO05D010010 5.7e-25 118.2 117 56.4
Gohir.D04G029100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 9.7e-25 117.5 148 49.3
Solyc02g089960.3 Solanum lycopersicum HOM05D007898 ORTHO05D010010 1.3e-24 117.1 155 48.4
Lj7P13T39 Lonicera japonica HOM05D007898 ORTHO05D010010 3.7e-24 115.5 131 51.1
Carub.0004s0293 Capsella rubella HOM05D007898 ORTHO05D010010 4.8e-24 115.2 145 48.3
CAN.G836.11 Capsicum annuum HOM05D007898 ORTHO05D010010 8.2e-24 114.4 142 47.9
Thhalv10000478m.g Eutrema salsugineum HOM05D007898 ORTHO05D010010 8.2e-24 114.4 137 50.4
SGA_v2.0_scaffold62G21534 Striga asiatica HOM05D007898 ORTHO05D010010 8.2e-24 114.4 131 51.1
ATR0053G039 Amborella trichopoda HOM05D007898 ORTHO05D010010 1.1e-23 114.0 152 48.0
Gohir.D03G018100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 1.8e-23 113.2 148 48.0
Gorai.012G033200 Gossypium raimondii HOM05D007898 ORTHO05D010010 1.8e-23 113.2 156 48.7
Nn1g05126 Nelumbo nucifera HOM05D007898 ORTHO05D010010 2.4e-23 112.8 158 46.2
Gohir.A02G162400 Gossypium hirsutum HOM05D007898 ORTHO05D010010 3.1e-23 112.5 148 47.3
PSO170G4740 Papaver somniferum HOM05D007898 ORTHO05D010010 5.3e-23 111.7 151 47.0
TPR.G31555 Trifolium pratense HOM05D007898 ORTHO05D010010 5.3e-23 111.7 151 44.4
Gohir.D04G023600 Gossypium hirsutum HOM05D007898 ORTHO05D010010 7.0e-23 111.3 156 48.1
Gohir.A05G386500 Gossypium hirsutum HOM05D007898 ORTHO05D010010 9.1e-23 110.9 156 45.5
AUR62008035 Chenopodium quinoa HOM05D007898 ORTHO05D010010 2.0e-22 109.8 132 45.5
Gohir.D04G023900 Gossypium hirsutum HOM05D007898 ORTHO05D010010 2.7e-22 109.4 156 48.1
EL10Ac6g14865 Beta vulgaris HOM05D007898 ORTHO05D010010 7.7e-22 107.8 136 43.4
CsaV3_6G042630 Cucumis sativus L. HOM05D007898 ORTHO05D010010 7.7e-22 107.8 173 42.2
MELO3C007502.2 Cucumis melo HOM05D007898 ORTHO05D010010 1.3e-21 107.1 167 43.7
Sed0027812 Sechium edule HOM05D007898 ORTHO05D010010 1.3e-21 107.1 169 42.6
ClCG01G016310 Citrullus lanatus HOM05D007898 ORTHO05D010010 2.9e-21 105.9 171 41.5
AUR62003213 Chenopodium quinoa HOM05D007898 ORTHO05D010010 1.5e-20 103.6 103 53.4
SHI08702 Sapria himalayana HOM05D007898 ORTHO05D010010 2.5e-20 102.8 109 50.5
Hund14127 Selenicereus undatus HOM05D007898 ORTHO05D010010 4.4e-17 92.0 162 40.1
FAN26G2880 Fragaria x ananassa HOM05D007898 ORTHO05D010010 2.2e-16 89.7 123 44.7
CDE02G3439 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 2.8e-16 89.4 151 38.4
Ciclev10027359m.g Citrus clementina HOM05D007898 ORTHO05D010010 8.3e-16 87.8 123 44.7
TAR374G1689 Trochodendron aralioides HOM05D007898 ORTHO05D010010 5.4e-15 85.1 98 50.0
BraA09t41069Z Brassica rapa HOM05D007898 ORTHO05D010010 2.0e-14 83.2 102 48.0
A09p56800 Brassica napus HOM05D007898 ORTHO05D010010 5.9e-14 81.6 122 42.6
Gorai.003G018300 Gossypium raimondii HOM05D007898 ORTHO05D010010 1.3e-13 80.5 155 41.3
Actinidia30992 Actinidia chinensis HOM05D007898 ORTHO05D010010 2.2e-13 79.7 166 38.0
C08p39760 Brassica napus HOM05D007898 ORTHO05D010010 2.2e-13 79.7 122 43.4
BolC8t51548H Brassica oleracea HOM05D007898 ORTHO05D010010 2.2e-13 79.7 122 43.4
SEGI_13764 Sequoiadendron giganteum HOM05D007898 ORTHO05D010010 2.5e-12 76.3 117 44.4
Lj4g0012479 Lotus japonicus HOM05D007898 ORTHO05D010010 8.8e-10 67.8 93 44.1
Haze_15152 Corylus avellana HOM05D007898 ORTHO05D010010 5.4e-07 58.5 105 44.8
FAN19G2518 Fragaria x ananassa HOM05D007898 ORTHO05D010010 7.7e-06 54.7 84 42.9


User provided reference genes

Program Settings