Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc07_g04790 Coffea canephora HOM05D002873 ORTHO05D002978 1.0e-12 76.3 67 100.0
Cc00_g21590 Coffea canephora HOM05D002873 ORTHO05D002978 3.0e-12 74.7 67 86.6
vmacro18087 Vaccinium macrocarpon HOM05D002873 ORTHO05D002978 1.6e-10 68.9 67 94.0
vmacro18088 Vaccinium macrocarpon HOM05D002873 ORTHO05D002978 1.6e-10 68.9 67 88.1
CAN.G497.26 Capsicum annuum HOM05D002873 ORTHO05D002978 3.7e-10 67.8 67 89.6
CAN.G497.27 Capsicum annuum HOM05D002873 ORTHO05D002978 3.7e-10 67.8 67 89.6
Actinidia26314 Actinidia chinensis HOM05D002873 ORTHO05D002978 4.8e-10 67.4 67 71.6
Migut.N00991 Erythranthe guttata HOM05D002873 ORTHO05D002978 1.1e-09 66.2 67 86.6
PGSC0003DMG400010052 Solanum tuberosum HOM05D002873 ORTHO05D002978 1.4e-09 65.9 67 86.6
Solyc02g082990.4 Solanum lycopersicum HOM05D002873 ORTHO05D002978 1.8e-09 65.5 67 68.7
Sopen02g027770 Solanum pennellii HOM05D002873 ORTHO05D002978 1.8e-09 65.5 67 65.7
PGSC0003DMG400001534 Solanum tuberosum HOM05D002873 ORTHO05D002978 1.8e-09 65.5 67 65.7
Migut.N00988 Erythranthe guttata HOM05D002873 ORTHO05D002978 2.4e-09 65.1 67 83.6
Migut.H00561 Erythranthe guttata HOM05D002873 ORTHO05D002978 3.1e-09 64.7 67 73.1
Solyc02g065640.3 Solanum lycopersicum HOM05D002873 ORTHO05D002978 3.1e-09 64.7 67 77.6
CSS0045706 Camellia sinensis var. sinensis HOM05D002873 ORTHO05D002978 5.3e-09 63.9 67 79.1
CSS0047860 Camellia sinensis var. sinensis HOM05D002873 ORTHO05D002978 5.3e-09 63.9 67 79.1
Peaxi162Scf01056g00020 Petunia axillaris HOM05D002873 ORTHO05D002978 6.9e-09 63.5 67 79.1
Sopen02g015850 Solanum pennellii HOM05D002873 ORTHO05D002978 9.0e-09 63.2 67 76.1
Solyc02g089570.3 Solanum lycopersicum HOM05D002873 ORTHO05D002978 1.2e-08 62.8 67 73.1
Solyc02g089580.3 Solanum lycopersicum HOM05D002873 ORTHO05D002978 1.2e-08 62.8 67 83.6
Solyc02g089590.3 Solanum lycopersicum HOM05D002873 ORTHO05D002978 1.5e-08 62.4 67 82.1
vmacro18089 Vaccinium macrocarpon HOM05D002873 ORTHO05D002978 2.0e-08 62.0 67 89.6
Dinv33894 Davidia involucrata HOM05D002873 ORTHO05D002978 2.6e-08 61.6 67 53.7
Oeu049338.1 Olea europaea HOM05D002873 ORTHO05D002978 2.6e-08 61.6 67 83.6
Sopen02g034310 Solanum pennellii HOM05D002873 ORTHO05D002978 2.6e-08 61.6 67 83.6
Actinidia18105 Actinidia chinensis HOM05D002873 ORTHO05D002978 3.4e-08 61.2 67 67.2
Peaxi162Scf00479g00423 Petunia axillaris HOM05D002873 ORTHO05D002978 3.4e-08 61.2 67 67.2
Dinv33895 Davidia involucrata HOM05D002873 ORTHO05D002978 4.5e-08 60.8 67 61.2
FAN02G0494 Fragaria x ananassa HOM05D002873 ORTHO05D002978 4.5e-08 60.8 66 60.6
Oeu032858.1 Olea europaea HOM05D002873 ORTHO05D002978 5.8e-08 60.5 67 76.1
Rhsim08G0081200 Rhododendron simsii HOM05D002873 ORTHO05D002978 5.8e-08 60.5 67 85.1
FAN05G4367 Fragaria x ananassa HOM05D002873 ORTHO05D002978 7.6e-08 60.1 67 70.1
Nitab4.5_0015566g0010 Nicotiana tabacum HOM05D002873 ORTHO05D002978 7.6e-08 60.1 67 77.6
Sopen02g034300 Solanum pennellii HOM05D002873 ORTHO05D002978 1.3e-07 59.3 67 50.7
Eucgr.I02095 Eucalyptus grandis HOM05D002873 ORTHO05D002978 1.7e-07 58.9 66 60.6
Thhalv10028020m.g Eutrema salsugineum HOM05D002873 ORTHO05D002978 1.7e-07 58.9 65 78.5
Nitab4.5_0001324g0010 Nicotiana tabacum HOM05D002873 ORTHO05D002978 2.2e-07 58.5 67 82.1
MD17G1070100 Malus domestica HOM05D002873 ORTHO05D002978 2.9e-07 58.2 66 77.3
Prupe.3G244200 Prunus persica HOM05D002873 ORTHO05D002978 2.9e-07 58.2 66 53.0
Prupe.3G244300 Prunus persica HOM05D002873 ORTHO05D002978 2.9e-07 58.2 66 53.0
Prupe.3G244600 Prunus persica HOM05D002873 ORTHO05D002978 2.9e-07 58.2 66 53.0
RcHm_v2.0_Chr2g0163991 Rosa chinensis HOM05D002873 ORTHO05D002978 2.9e-07 58.2 67 52.2
SalBow1G5754 Salvia bowleyana HOM05D002873 ORTHO05D002978 2.9e-07 58.2 67 85.1
CsaV3_5G004620 Cucumis sativus L. HOM05D002873 ORTHO05D002978 6.5e-07 57.0 66 62.1
Rhsim08G0081300 Rhododendron simsii HOM05D002873 ORTHO05D002978 6.5e-07 57.0 32 90.6
Nitab4.5_0012845g0030 Nicotiana tabacum HOM05D002873 ORTHO05D002978 8.4e-07 56.6 67 71.6
Prupe.3G244500 Prunus persica HOM05D002873 ORTHO05D002978 8.4e-07 56.6 66 51.5
SpUn0185_0020 Schrenkiella parvula HOM05D002873 ORTHO05D002978 1.1e-06 56.2 65 86.2
Cfa020560 Carpinus fangiana HOM05D002873 ORTHO05D002978 1.4e-06 55.8 67 50.7
Peaxi162Scf00479g00055 Petunia axillaris HOM05D002873 ORTHO05D002978 1.4e-06 55.8 67 50.7
Prupe.3G244100 Prunus persica HOM05D002873 ORTHO05D002978 1.4e-06 55.8 66 51.5
Migut.K00873 Erythranthe guttata HOM05D002873 ORTHO05D002978 1.9e-06 55.5 67 79.1
Sed0018450 Sechium edule HOM05D002873 ORTHO05D002978 1.9e-06 55.5 66 69.7
Sc11g0008050 Simmondsia chinensis HOM05D002873 ORTHO05D002978 1.9e-06 55.5 67 61.2
TWI32G0493 Tripterygium wilfordii HOM05D002873 ORTHO05D002978 1.9e-06 55.5 67 79.1
Prupe.3G244400 Prunus persica HOM05D002873 ORTHO05D002978 2.5e-06 55.1 66 50.0
RcHm_v2.0_Chr2g0164011 Rosa chinensis HOM05D002873 ORTHO05D002978 2.5e-06 55.1 66 69.7
Sed0018699 Sechium edule HOM05D002873 ORTHO05D002978 2.5e-06 55.1 66 72.7
Actinidia36291 Actinidia chinensis HOM05D002873 ORTHO05D002978 3.2e-06 54.7 67 70.1
Duzib268G0192 Durio zibethinus HOM05D002873 ORTHO05D002978 4.2e-06 54.3 66 78.8
Lalb_Chr04g0258251 Lupinus albus HOM05D002873 ORTHO05D002978 4.2e-06 54.3 64 50.0
Hma1.2p1_0588F.1_g184500 Hydrangea macrophylla HOM05D002873 ORTHO05D002978 5.5e-06 53.9 67 71.6
Sed0026183 Sechium edule HOM05D002873 ORTHO05D002978 5.5e-06 53.9 66 60.6
GSVIVG01036492001 Vitis vinifera HOM05D002873 ORTHO05D002978 5.5e-06 53.9 67 46.3
Lsat_1_v5_gn_4_175141 Lactuca sativa HOM05D002873 ORTHO05D002978 7.1e-06 53.5 67 80.6
Sed0008680 Sechium edule HOM05D002873 ORTHO05D002978 7.1e-06 53.5 66 53.0
THA.LOC109117084 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 7.1e-06 53.5 66 48.5
CSS0040391 Camellia sinensis var. sinensis HOM05D002873 ORTHO05D002978 9.3e-06 53.1 32 84.4
Carub.0007s3711 Capsella rubella HOM05D002873 ORTHO05D002978 9.3e-06 53.1 65 86.2
MD09G1079600 Malus domestica HOM05D002873 ORTHO05D002978 9.3e-06 53.1 66 50.0
Thecc.04G146000 Theobroma cacao HOM05D002873 ORTHO05D002978 9.3e-06 53.1 66 72.7


User provided reference genes

Program Settings