Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc07_g04230 Coffea canephora HOM05D006882 ORTHO05D008688 8.8e-57 223.4 113 100.0
GSVIVG01032906001 Vitis vinifera HOM05D006882 ORTHO05D008688 6.4e-23 110.9 113 59.3
Dinv34941 Davidia involucrata HOM05D006882 ORTHO05D008688 5.4e-22 107.8 111 58.6
TAR371G1018 Trochodendron aralioides HOM05D006882 ORTHO05D008688 6.6e-20 100.9 106 56.6
vmacro05638 Vaccinium macrocarpon HOM05D006882 ORTHO05D008688 1.5e-19 99.8 112 56.2
Cfa007668 Carpinus fangiana HOM05D006882 ORTHO05D008688 2.5e-19 99.0 113 53.1
Dinv33828 Davidia involucrata HOM05D006882 ORTHO05D008688 9.5e-19 97.1 78 69.2
Prupe.3G254900 Prunus persica HOM05D006882 ORTHO05D008688 9.5e-19 97.1 78 67.9
Eucgr.I02034 Eucalyptus grandis HOM05D006882 ORTHO05D008688 1.2e-18 96.7 94 57.4
Potri.017G094200 Populus trichocarpa HOM05D006882 ORTHO05D008688 1.2e-18 96.7 119 47.9
CiPaw.03G088500 Carya illinoinensis HOM05D006882 ORTHO05D008688 2.1e-18 95.9 113 54.0
Haze_14430 Corylus avellana HOM05D006882 ORTHO05D008688 2.8e-18 95.5 113 50.4
Sabra17G0083000 Salix brachista HOM05D006882 ORTHO05D008688 2.8e-18 95.5 119 48.7
Oeu062161.1 Olea europaea HOM05D006882 ORTHO05D008688 4.7e-18 94.7 114 50.9
Phvul.004G037300 Phaseolus vulgaris HOM05D006882 ORTHO05D008688 6.2e-18 94.4 116 48.3
Hma1.2p1_0481F.1_g162213 Hydrangea macrophylla HOM05D006882 ORTHO05D008688 1.1e-17 93.6 92 59.8
Atru.chr8.430 Acer truncatum HOM05D006882 ORTHO05D008688 1.4e-17 93.2 100 57.0
Thecc.04G095700 Theobroma cacao HOM05D006882 ORTHO05D008688 1.4e-17 93.2 110 54.5
PGR004G1649 Punica granatum HOM05D006882 ORTHO05D008688 5.2e-17 91.3 98 51.0
THA.LOC104822332 Tarenaya hassleriana HOM05D006882 ORTHO05D008688 5.2e-17 91.3 106 50.9
MSTRG.23884 Avicennia marina HOM05D006882 ORTHO05D008688 6.8e-17 90.9 99 53.5
QL02p067584 Quercus lobata HOM05D006882 ORTHO05D008688 6.8e-17 90.9 112 51.8
MD09G1066800 Malus domestica HOM05D006882 ORTHO05D008688 8.9e-17 90.5 100 57.0
MD17G1059700 Malus domestica HOM05D006882 ORTHO05D008688 1.2e-16 90.1 98 57.1
Manes.01G096000 Manihot esculenta HOM05D006882 ORTHO05D008688 1.5e-16 89.7 113 50.4
Aqoxy3G00507 Aquilegia oxysepala HOM05D006882 ORTHO05D008688 2.0e-16 89.4 111 48.6
Manes.02G055100 Manihot esculenta HOM05D006882 ORTHO05D008688 2.0e-16 89.4 117 48.7
CANSAT64G2010 Cannabis sativa HOM05D006882 ORTHO05D008688 2.6e-16 89.0 112 48.2
AL3G11350 Arabidopsis lyrata HOM05D006882 ORTHO05D008688 3.4e-16 88.6 113 47.8
AT3G02120 Arabidopsis thaliana HOM05D006882 ORTHO05D008688 3.4e-16 88.6 117 46.2
COL.COLO4_04934 Corchorus olitorius HOM05D006882 ORTHO05D008688 3.4e-16 88.6 114 50.0
RcHm_v2.0_Chr2g0165841 Rosa chinensis HOM05D006882 ORTHO05D008688 4.4e-16 88.2 100 54.0
Gohir.A11G072700 Gossypium hirsutum HOM05D006882 ORTHO05D008688 5.8e-16 87.8 66 68.2
Glyma.19G030100 Glycine max HOM05D006882 ORTHO05D008688 7.5e-16 87.4 112 50.0
Peaxi162Scf00166g00424 Petunia axillaris HOM05D006882 ORTHO05D008688 7.5e-16 87.4 113 54.0
Sp3g01180 Schrenkiella parvula HOM05D006882 ORTHO05D008688 7.5e-16 87.4 117 47.9
Gohir.D11G077000 Gossypium hirsutum HOM05D006882 ORTHO05D008688 9.8e-16 87.0 88 55.7
Potri.004G120200 Populus trichocarpa HOM05D006882 ORTHO05D008688 9.8e-16 87.0 64 65.6
Carub.0003s0123 Capsella rubella HOM05D006882 ORTHO05D008688 2.2e-15 85.9 121 47.9
CARHR076080 Cardamine hirsuta HOM05D006882 ORTHO05D008688 2.2e-15 85.9 116 45.7
Gorai.007G082700 Gossypium raimondii HOM05D006882 ORTHO05D008688 2.2e-15 85.9 110 48.2
Duzib187G0261 Durio zibethinus HOM05D006882 ORTHO05D008688 2.9e-15 85.5 88 58.0
VMungo0464G1672 Vigna mungo HOM05D006882 ORTHO05D008688 6.4e-15 84.3 67 59.7
Migut.H00624 Erythranthe guttata HOM05D006882 ORTHO05D008688 8.3e-15 84.0 100 55.0
arahy.Tifrunner.gnm1.ann1.PJ6ZH1 Arachis hypogaea HOM05D006882 ORTHO05D008688 1.4e-14 83.2 108 49.1
arahy.Tifrunner.gnm1.ann1.YR6PCG Arachis hypogaea HOM05D006882 ORTHO05D008688 1.4e-14 83.2 108 49.1
Duzib147G0673 Durio zibethinus HOM05D006882 ORTHO05D008688 1.4e-14 83.2 116 48.3
FvH4_6g46850 Fragaria vesca HOM05D006882 ORTHO05D008688 1.9e-14 82.8 78 60.3
FAN09G3572 Fragaria x ananassa HOM05D006882 ORTHO05D008688 1.9e-14 82.8 78 60.3
FAN14G0989 Fragaria x ananassa HOM05D006882 ORTHO05D008688 1.9e-14 82.8 78 60.3
Psat1g068840 Pisum sativum HOM05D006882 ORTHO05D008688 1.9e-14 82.8 70 60.0
Rhsim10G0049600 Rhododendron simsii HOM05D006882 ORTHO05D008688 1.9e-14 82.8 108 51.9
Aa31LG5G12650 Aethionema arabicum HOM05D006882 ORTHO05D008688 2.4e-14 82.4 115 43.5
DCAR_025431 Daucus carota HOM05D006882 ORTHO05D008688 2.4e-14 82.4 52 75.0
FAN05G2472 Fragaria x ananassa HOM05D006882 ORTHO05D008688 2.4e-14 82.4 78 60.3
Glyma.13G056500 Glycine max HOM05D006882 ORTHO05D008688 2.4e-14 82.4 106 49.1
Hund13139 Selenicereus undatus HOM05D006882 ORTHO05D008688 2.4e-14 82.4 110 45.5
TPR.G10007 Trifolium pratense HOM05D006882 ORTHO05D008688 2.4e-14 82.4 123 43.9
MSTRG.2998 Avicennia marina HOM05D006882 ORTHO05D008688 3.2e-14 82.0 63 69.8
Ciclev10003349m.g Citrus clementina HOM05D006882 ORTHO05D008688 3.2e-14 82.0 67 65.7
Ciclev10003470m.g Citrus clementina HOM05D006882 ORTHO05D008688 4.1e-14 81.6 67 65.7
Ciclev10027312m.g Citrus clementina HOM05D006882 ORTHO05D008688 4.1e-14 81.6 67 65.7
Lj2g0004633 Lotus japonicus HOM05D006882 ORTHO05D008688 4.1e-14 81.6 111 46.8
Nitab4.5_0003841g0040 Nicotiana tabacum HOM05D006882 ORTHO05D008688 5.4e-14 81.3 125 48.8
PGSC0003DMG400001358 Solanum tuberosum HOM05D006882 ORTHO05D008688 5.4e-14 81.3 84 58.3
Lalb_Chr06g0174961 Lupinus albus HOM05D006882 ORTHO05D008688 7.0e-14 80.9 88 52.3
Ca_04305_v3 Cicer arietinum L. HOM05D006882 ORTHO05D008688 9.2e-14 80.5 109 43.1
Duzib264G0735 Durio zibethinus HOM05D006882 ORTHO05D008688 9.2e-14 80.5 66 63.6
Ciclev10013137m.g Citrus clementina HOM05D006882 ORTHO05D008688 1.2e-13 80.1 68 66.2
SalBow1G1386 Salvia bowleyana HOM05D006882 ORTHO05D008688 1.2e-13 80.1 93 53.8
SalBow1G4555 Salvia bowleyana HOM05D006882 ORTHO05D008688 1.2e-13 80.1 93 53.8
FAN02G1963 Fragaria x ananassa HOM05D006882 ORTHO05D008688 2.0e-13 79.3 78 59.0
Solyc02g088830.4 Solanum lycopersicum HOM05D006882 ORTHO05D008688 2.7e-13 79.0 114 47.4
TWI60G1503 Tripterygium wilfordii HOM05D006882 ORTHO05D008688 2.7e-13 79.0 113 46.9
Gohir.D09G008650 Gossypium hirsutum HOM05D006882 ORTHO05D008688 3.5e-13 78.6 83 51.8
AUR62038673 Chenopodium quinoa HOM05D006882 ORTHO05D008688 4.6e-13 78.2 61 65.6
Sopen02g033540 Solanum pennellii HOM05D006882 ORTHO05D008688 4.6e-13 78.2 106 49.1
Gorai.006G010400 Gossypium raimondii HOM05D006882 ORTHO05D008688 6.0e-13 77.8 83 51.8
Glyma.01G085200 Glycine max HOM05D006882 ORTHO05D008688 7.8e-13 77.4 102 49.0
Medtr6g015280 Medicago truncatula HOM05D006882 ORTHO05D008688 7.8e-13 77.4 64 62.5
BcaB07g32783 Brassica carinata HOM05D006882 ORTHO05D008688 1.0e-12 77.0 102 50.0
BcaC05g27151 Brassica carinata HOM05D006882 ORTHO05D008688 1.0e-12 77.0 77 58.4
C05p30380 Brassica napus HOM05D006882 ORTHO05D008688 1.0e-12 77.0 77 58.4
BolC5t31777H Brassica oleracea HOM05D006882 ORTHO05D008688 1.0e-12 77.0 77 58.4
Medtr6g015260 Medicago truncatula HOM05D006882 ORTHO05D008688 1.0e-12 77.0 65 60.0
Sc14g0006330 Simmondsia chinensis HOM05D006882 ORTHO05D008688 1.0e-12 77.0 101 43.6
TWI34G0355 Tripterygium wilfordii HOM05D006882 ORTHO05D008688 1.0e-12 77.0 117 48.7
Cpa.g.sc14.176 Carica papaya HOM05D006882 ORTHO05D008688 1.3e-12 76.6 104 48.1
Peaxi162Scf00298g00055 Petunia axillaris HOM05D006882 ORTHO05D008688 1.3e-12 76.6 69 62.3
HanXRQChr07g0199771 Helianthus annuus HOM05D006882 ORTHO05D008688 2.3e-12 75.9 105 47.6
Ah.12g062710 Amaranthus hybridus HOM05D006882 ORTHO05D008688 3.9e-12 75.1 87 46.0
AUR62018188 Chenopodium quinoa HOM05D006882 ORTHO05D008688 3.9e-12 75.1 61 62.3
Lsat_1_v5_gn_2_90100 Lactuca sativa HOM05D006882 ORTHO05D008688 3.9e-12 75.1 97 50.5
Peaxi162Scf00025g00208 Petunia axillaris HOM05D006882 ORTHO05D008688 5.0e-12 74.7 64 67.2
A09p35030 Brassica napus HOM05D006882 ORTHO05D008688 6.6e-12 74.3 76 55.3
BraA09t39034Z Brassica rapa HOM05D006882 ORTHO05D008688 8.6e-12 73.9 91 48.4
Nn1g08730 Nelumbo nucifera HOM05D006882 ORTHO05D008688 1.1e-11 73.6 55 63.6
Sed0003732 Sechium edule HOM05D006882 ORTHO05D008688 1.1e-11 73.6 47 80.9
PSO017G6201 Papaver somniferum HOM05D006882 ORTHO05D008688 1.5e-11 73.2 66 56.1
ECA238G0863 Erigeron canadensis HOM05D006882 ORTHO05D008688 1.9e-11 72.8 94 51.1
Gohir.A09G009600 Gossypium hirsutum HOM05D006882 ORTHO05D008688 1.9e-11 72.8 98 48.0
ClCG07G016320 Citrullus lanatus HOM05D006882 ORTHO05D008688 5.6e-11 71.2 50 76.0
Peaxi162Scf00329g00037 Petunia axillaris HOM05D006882 ORTHO05D008688 5.6e-11 71.2 64 65.6
Peaxi162Scf00254g00028 Petunia axillaris HOM05D006882 ORTHO05D008688 1.6e-10 69.7 51 72.5
ATR0177G043 Amborella trichopoda HOM05D006882 ORTHO05D008688 6.2e-10 67.8 109 41.3
CsaV3_4G009150 Cucumis sativus L. HOM05D006882 ORTHO05D008688 8.1e-10 67.4 50 70.0
MBI16_g10826_MAGBIO Magnolia biondii HOM05D006882 ORTHO05D008688 1.1e-09 67.0 75 48.0
Peaxi162Scf00202g00010 Petunia axillaris HOM05D006882 ORTHO05D008688 2.6e-08 62.4 49 69.4
Lsat_1_v5_gn_4_172620 Lactuca sativa HOM05D006882 ORTHO05D048217 5.8e-08 61.2 91 39.6
CsaV3_5G014380 Cucumis sativus L. HOM05D006882 ORTHO05D008688 1.7e-07 59.7 54 59.3
Mapoly0103s0008 Marchantia polymorpha HOM05D022139 ORTHO05D008688 2.9e-07 58.9 50 58.0
Peaxi162Scf00271g00524 Petunia axillaris HOM05D006882 ORTHO05D008688 2.4e-06 55.8 107 40.2
CDE04G1794 Ceratophyllum demersum HOM05D006882 ORTHO05D008688 5.4e-06 54.7 91 39.6


User provided reference genes

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