Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc07_g03400 Coffea canephora HOM05D006612 ORTHO05D009014 3.0e-190 668.3 332 100.0
Cc10_g00450 Coffea canephora HOM05D004506 ORTHO05D005894 5.1e-121 438.3 268 83.6
Cc02_g21330 Coffea canephora HOM05D006612 ORTHO05D009014 4.4e-24 116.3 86 68.6
SGA_v2.0_scaffold289G47248 Striga asiatica HOM05D006612 ORTHO05D009014 6.4e-23 112.5 311 28.6
Cc07_g18580 Coffea canephora HOM05D006612 ORTHO05D009014 3.5e-21 106.7 329 25.2
SGA_v2.0_scaffold319G48529 Striga asiatica HOM05D006612 ORTHO05D009014 2.3e-20 104.0 220 31.8
Cc09_g07530 Coffea canephora HOM05D006612 ORTHO05D009014 8.7e-20 102.1 111 45.9
SGA_v2.0_scaffold3G01561 Striga asiatica HOM05D006612 ORTHO05D009014 2.5e-19 100.5 270 28.1
SGA_v2.0_scaffold19G08816 Striga asiatica HOM05D006612 ORTHO05D009014 2.1e-18 97.4 265 27.5
SGA_v2.0_scaffold478G52233 Striga asiatica HOM05D006612 ORTHO05D009014 6.2e-18 95.9 295 26.8
Lsat_1_v5_gn_2_22101 Lactuca sativa HOM05D006612 ORTHO05D009014 1.1e-17 95.1 147 34.7
SGA_v2.0_scaffold67G22672 Striga asiatica HOM05D006612 ORTHO05D009014 4.0e-17 93.2 248 27.8
SGA_v2.0_scaffold188G40334 Striga asiatica HOM05D006612 ORTHO05D009014 7.6e-16 89.0 260 28.1
SGA_v2.0_scaffold27G11559 Striga asiatica HOM05D006612 ORTHO05D009014 4.9e-15 86.3 129 38.0
SGA_v2.0_scaffold37G14810 Striga asiatica HOM05D006612 ORTHO05D009014 6.4e-15 85.9 266 24.8
SGA_v2.0_scaffold141G35579 Striga asiatica HOM05D006612 ORTHO05D009014 1.9e-14 84.3 260 26.5
Cc04_g13910 Coffea canephora HOM05D006612 ORTHO05D009014 2.4e-14 84.0 253 25.7
SGA_v2.0_scaffold2648G54169 Striga asiatica HOM05D006612 ORTHO05D009014 3.2e-14 83.6 247 25.9
Cc02_g21320 Coffea canephora HOM05D006612 ORTHO05D009014 1.6e-13 81.3 73 46.6
Lsat_1_v5_gn_7_34501 Lactuca sativa HOM05D006612 ORTHO05D009014 1.6e-13 81.3 164 28.7
Atru.chr4.2122 Acer truncatum HOM05D002751 ORTHO05D003005 2.7e-13 80.5 162 29.0
Dinv41987 Davidia involucrata HOM05D000824 ORTHO05D010384 2.7e-13 80.5 280 23.2
Dinv30925 Davidia involucrata HOM05D000824 ORTHO05D010384 3.5e-13 80.1 280 22.9
SGA_v2.0_scaffold10G05328 Striga asiatica HOM05D006612 ORTHO05D009014 3.5e-13 80.1 263 25.1
Dinv19531 Davidia involucrata HOM05D000824 ORTHO05D010384 1.0e-12 78.6 280 22.9
Dinv06234 Davidia involucrata HOM05D006612 ORTHO05D010384 1.1e-11 75.1 162 30.2
SGA_v2.0_scaffold46G17404 Striga asiatica HOM05D006612 ORTHO05D009014 1.9e-11 74.3 157 28.7
Cc10_g10270 Coffea canephora HOM05D017605 ORTHO05D009014 4.3e-11 73.2 249 26.5
Rhsim08G0049800 Rhododendron simsii HOM05D023805 ORTHO05D010384 5.6e-11 72.8 163 26.4
Dinv08250 Davidia involucrata HOM05D000824 ORTHO05D010384 7.4e-11 72.4 119 31.9
Dinv10520 Davidia involucrata HOM05D000824 ORTHO05D010384 9.6e-11 72.0 129 32.6
CiPaw.01G012000 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.3e-10 71.6 285 20.4
CiPaw.09G042900 Carya illinoinensis HOM05D009267 ORTHO05D010384 1.3e-10 71.6 263 24.0
CANSAT80G1945 Cannabis sativa HOM05D006612 ORTHO05D010384 2.1e-10 70.9 110 31.8
SGA_v2.0_scaffold346G49531 Striga asiatica HOM05D006612 ORTHO05D009014 2.1e-10 70.9 278 23.0
Cc08_g02920 Coffea canephora HOM05D006612 ORTHO05D009014 3.7e-10 70.1 151 29.8
SGA_v2.0_scaffold169G38616 Striga asiatica HOM05D006612 ORTHO05D009014 3.7e-10 70.1 231 24.2
Cc09_g02230 Coffea canephora HOM05D006612 ORTHO05D009014 4.8e-10 69.7 236 25.4
Actinidia03272 Actinidia chinensis HOM05D006612 ORTHO05D010619 6.2e-10 69.3 266 22.9
Cc01_g08100 Coffea canephora HOM05D000096 ORTHO05D000045 6.2e-10 69.3 107 34.6
CiPaw.01G054700 Carya illinoinensis HOM05D009267 ORTHO05D010384 1.1e-09 68.6 263 22.4
CiPaw.15G057000 Carya illinoinensis HOM05D009267 ORTHO05D010384 1.1e-09 68.6 263 22.4
CANSAT56G0625 Cannabis sativa HOM05D008860 ORTHO05D010619 2.4e-09 67.4 268 23.1
CiPaw.15G013500 Carya illinoinensis HOM05D009267 ORTHO05D010384 2.4e-09 67.4 263 22.1
CiPaw.15G116600 Carya illinoinensis HOM05D000096 ORTHO05D010384 6.9e-09 65.9 263 22.1
Hund13281 Selenicereus undatus HOM05D000096 ORTHO05D003441 6.9e-09 65.9 104 32.7
Nitab4.5_0002374g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.6e-08 63.9 138 26.1
Peaxi162Scf00131g00001 Petunia axillaris HOM05D002261 ORTHO05D002334 2.6e-08 63.9 167 30.5
Cc00_g13000 Coffea canephora HOM05D006612 ORTHO05D009014 3.4e-08 63.5 92 35.9
SGA_v2.0_scaffold83G26370 Striga asiatica HOM05D006612 ORTHO05D009014 3.4e-08 63.5 231 23.4
Cc02_g03800 Coffea canephora HOM05D006612 ORTHO05D009014 4.5e-08 63.2 127 29.9
Peaxi162Scf00519g00002 Petunia axillaris HOM05D002261 ORTHO05D002334 4.5e-08 63.2 322 25.2
Hund01569 Selenicereus undatus HOM05D000096 ORTHO05D003441 4.5e-08 63.2 101 33.7
CANSAT80G1395 Cannabis sativa HOM05D008860 ORTHO05D010619 5.8e-08 62.8 157 26.1
CiPaw.07G195700 Carya illinoinensis HOM05D009267 ORTHO05D010384 5.8e-08 62.8 263 21.3
Oeu058530.1 Olea europaea HOM05D008860 ORTHO05D010619 9.9e-08 62.0 130 30.0
Hund03638 Selenicereus undatus HOM05D000096 ORTHO05D000045 9.9e-08 62.0 117 31.6
Hund09895 Selenicereus undatus HOM05D000096 ORTHO05D000045 9.9e-08 62.0 101 34.7
Solyc02g038640.3 Solanum lycopersicum HOM05D002261 ORTHO05D002334 9.9e-08 62.0 105 35.2
CANSAT01G2695 Cannabis sativa HOM05D008860 ORTHO05D010384 1.7e-07 61.2 165 26.1
Sopen04g013910 Solanum pennellii HOM05D002261 ORTHO05D002334 1.7e-07 61.2 266 24.8
SGA_v2.0_scaffold30G12440 Striga asiatica HOM05D006612 ORTHO05D009014 1.7e-07 61.2 230 23.5
Hund10494 Selenicereus undatus HOM05D000096 ORTHO05D003441 2.2e-07 60.8 103 31.1
CANSAT78G1911 Cannabis sativa HOM05D000096 ORTHO05D010619 2.9e-07 60.5 129 28.7
PGSC0003DMG400023096 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.9e-07 60.5 144 31.2
Cc11_g04420 Coffea canephora HOM05D006612 ORTHO05D009014 3.8e-07 60.1 135 34.1
Dinv08482 Davidia involucrata HOM05D000824 ORTHO05D010619 3.8e-07 60.1 118 29.7
SMO358G0534 Selaginella moellendorffii HOM05D000824 ORTHO05D003555 3.8e-07 60.1 148 27.0
Hund14894 Selenicereus undatus HOM05D000096 ORTHO05D003441 4.9e-07 59.7 115 30.4
Hund02279 Selenicereus undatus HOM05D000096 ORTHO05D003441 6.4e-07 59.3 124 29.8
Haze_01485 Corylus avellana HOM05D006612 ORTHO05D010384 8.4e-07 58.9 122 29.5
Hund22340 Selenicereus undatus HOM05D000096 ORTHO05D003441 1.1e-06 58.5 101 32.7
Aqoxy3G03684 Aquilegia oxysepala HOM05D000824 ORTHO05D003555 1.4e-06 58.2 103 31.1
Hund15722 Selenicereus undatus HOM05D000096 ORTHO05D003441 1.4e-06 58.2 114 28.9
Hund22932 Selenicereus undatus HOM05D000096 ORTHO05D003441 1.4e-06 58.2 114 28.9
Hund01379 Selenicereus undatus HOM05D000096 ORTHO05D000045 1.9e-06 57.8 101 33.7
Hund14972 Selenicereus undatus HOM05D000096 ORTHO05D003441 1.9e-06 57.8 114 29.8
Hund24234 Selenicereus undatus HOM05D000096 ORTHO05D003441 1.9e-06 57.8 113 30.1
CAN.G165.12 Capsicum annuum HOM05D002261 ORTHO05D002334 2.5e-06 57.4 103 29.1
Hund08957 Selenicereus undatus HOM05D000096 ORTHO05D003441 2.5e-06 57.4 96 35.4
Hund10443 Selenicereus undatus HOM05D000096 ORTHO05D003441 3.2e-06 57.0 114 28.9
Hund20441 Selenicereus undatus HOM05D000096 ORTHO05D003441 3.2e-06 57.0 114 28.9
CAN.G765.17 Capsicum annuum HOM05D002261 ORTHO05D002334 5.5e-06 56.2 116 26.7
Hund30016 Selenicereus undatus HOM05D000096 ORTHO05D003441 5.5e-06 56.2 91 35.2
Hund30189 Selenicereus undatus HOM05D000096 ORTHO05D003441 5.5e-06 56.2 137 27.0
PGSC0003DMG400020377 Solanum tuberosum HOM05D002261 ORTHO05D002334 7.1e-06 55.8 154 30.5
Atru.chr8.1160 Acer truncatum HOM05D006612 ORTHO05D010384 9.3e-06 55.5 69 40.6


User provided reference genes

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