Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc07_g02920 Coffea canephora HOM05D002474 ORTHO05D006727 6.9e-176 620.5 317 100.0
TAR629G1594 Trochodendron aralioides HOM05D002474 ORTHO05D006727 6.2e-108 394.8 276 72.1
Oeu033341.3 Olea europaea HOM05D002474 ORTHO05D006727 1.1e-104 384.0 316 65.2
Nn4g23008 Nelumbo nucifera HOM05D002474 ORTHO05D006727 3.2e-104 382.5 284 69.4
QL02p080225 Quercus lobata HOM05D002474 ORTHO05D006727 4.1e-104 382.1 283 68.6
CAN.G1128.5 Capsicum annuum HOM05D002474 ORTHO05D006727 6.6e-102 374.8 286 69.2
Atru.chr8.2476 Acer truncatum HOM05D002474 ORTHO05D006727 8.6e-102 374.4 283 67.1
Sopen02g016630 Solanum pennellii HOM05D002474 ORTHO05D006727 1.9e-101 373.2 250 74.4
PGSC0003DMG400006940 Solanum tuberosum HOM05D002474 ORTHO05D006727 3.3e-101 372.5 271 70.5
Gohir.D13G224300 Gossypium hirsutum HOM05D002474 ORTHO05D006727 4.3e-101 372.1 293 66.6
Solyc02g067480.3 Solanum lycopersicum HOM05D002474 ORTHO05D006727 5.6e-101 371.7 250 74.4
Gorai.013G255100 Gossypium raimondii HOM05D002474 ORTHO05D006727 1.2e-100 370.5 292 66.4
Thecc.09G254500 Theobroma cacao HOM05D002474 ORTHO05D006727 1.2e-100 370.5 268 69.8
Glyma.19G019000 Glycine max HOM05D002474 ORTHO05D006727 1.6e-100 370.2 270 68.5
DCAR_011168 Daucus carota HOM05D002474 ORTHO05D006727 2.8e-100 369.4 284 66.9
RhsimUnG0054500 Rhododendron simsii HOM05D002474 ORTHO05D006727 2.4e-99 366.3 267 70.4
Migut.K01338 Erythranthe guttata HOM05D002474 ORTHO05D006727 8.9e-99 364.4 281 66.9
Eucgr.J02138 Eucalyptus grandis HOM05D002474 ORTHO05D006727 1.2e-98 364.0 258 69.0
Hma1.2p1_0449F.1_g154950 Hydrangea macrophylla HOM05D002474 ORTHO05D006727 1.2e-98 364.0 236 76.3
CSS0021046 Camellia sinensis var. sinensis HOM05D002474 ORTHO05D006727 1.5e-98 363.6 284 66.9
Gohir.A13G220300 Gossypium hirsutum HOM05D002474 ORTHO05D006727 2.6e-98 362.8 292 65.4
Nitab4.5_0002699g0040 Nicotiana tabacum HOM05D002474 ORTHO05D006727 2.6e-98 362.8 250 73.6
Phvul.004G025500 Phaseolus vulgaris HOM05D002474 ORTHO05D006727 2.6e-98 362.8 270 68.1
Cfa007503 Carpinus fangiana HOM05D002474 ORTHO05D006727 1.3e-97 360.5 261 70.5
FvH4_6g49390 Fragaria vesca HOM05D002474 ORTHO05D006727 2.2e-97 359.8 284 63.7
Lsat_1_v5_gn_3_102300 Lactuca sativa HOM05D002474 ORTHO05D006727 2.9e-97 359.4 252 69.4
Nitab4.5_0006062g0010 Nicotiana tabacum HOM05D002474 ORTHO05D006727 2.9e-97 359.4 250 73.6
FAN05G2709 Fragaria x ananassa HOM05D002474 ORTHO05D006727 4.9e-97 358.6 308 60.1
Manes.S095220 Manihot esculenta HOM05D002474 ORTHO05D006727 4.9e-97 358.6 262 69.1
RcHm_v2.0_Chr2g0169251 Rosa chinensis HOM05D002474 ORTHO05D006727 4.9e-97 358.6 284 63.7
Sc11g0006920 Simmondsia chinensis HOM05D002474 ORTHO05D006727 4.9e-97 358.6 273 65.6
HanXRQChr17g0547501 Helianthus annuus HOM05D002474 ORTHO05D006727 2.4e-96 356.3 256 69.1
TWI60G0106 Tripterygium wilfordii HOM05D002474 ORTHO05D006727 3.2e-96 355.9 253 71.1
ECA246G0556 Erigeron canadensis HOM05D002474 ORTHO05D006727 4.2e-96 355.5 252 69.0
Prupe.3G272800 Prunus persica HOM05D002474 ORTHO05D006727 1.0e-94 350.9 285 63.9
QL02p080117 Quercus lobata HOM05D002474 ORTHO05D006727 1.3e-94 350.5 266 66.9
Nitab4.5_0023901g0010 Nicotiana tabacum HOM05D002474 ORTHO05D006727 2.3e-94 349.7 236 74.6
MELO3C021965.2 Cucumis melo HOM05D002474 ORTHO05D006727 3.9e-94 349.0 240 72.5
GSVIVG01032597001 Vitis vinifera HOM05D002474 ORTHO05D006727 3.9e-94 349.0 283 62.5
arahy.Tifrunner.gnm1.ann1.DRNA5E Arachis hypogaea HOM05D002474 ORTHO05D006727 1.1e-93 347.4 268 65.3
arahy.Tifrunner.gnm1.ann1.B2F8E8 Arachis hypogaea HOM05D002474 ORTHO05D006727 1.9e-93 346.7 243 69.1
TPR.G4252 Trifolium pratense HOM05D002474 ORTHO05D006727 4.3e-93 345.5 255 67.1
CsaV3_5G037800 Cucumis sativus L. HOM05D002474 ORTHO05D006727 7.3e-93 344.7 240 72.1
Ciclev10011620m.g Citrus clementina HOM05D002474 ORTHO05D006727 9.6e-93 344.4 284 63.0
Psat1g077640 Pisum sativum HOM05D002474 ORTHO05D006727 6.2e-92 341.7 249 67.5
Cpa.g.sc14.49 Carica papaya HOM05D002474 ORTHO05D006727 1.1e-91 340.9 270 65.2
Potri.004G130000 Populus trichocarpa HOM05D002474 ORTHO05D006727 1.8e-91 340.1 286 64.0
Aqoxy3G00804 Aquilegia oxysepala HOM05D002474 ORTHO05D006727 2.4e-91 339.7 224 75.0
Medtr6g011270 Medicago truncatula HOM05D002474 ORTHO05D006727 3.1e-91 339.3 234 70.1
Lalb_Chr06g0175531 Lupinus albus HOM05D002474 ORTHO05D006727 1.5e-90 337.0 263 64.6
Sed0010242 Sechium edule HOM05D002474 ORTHO05D006727 2.0e-90 336.7 243 69.5
CiPaw.04G020500 Carya illinoinensis HOM05D002474 ORTHO05D006727 4.5e-90 335.5 284 63.4
Sabra04G0087600 Salix brachista HOM05D002474 ORTHO05D006727 1.7e-89 333.6 288 62.8
PSO478G4089 Papaver somniferum HOM05D002474 ORTHO05D006727 2.2e-89 333.2 225 72.0
Peaxi162Scf00059g00319 Petunia axillaris HOM05D002474 ORTHO05D006727 3.8e-89 332.4 242 70.2
Ca_04259_v3 Cicer arietinum L. HOM05D002474 ORTHO05D006727 3.2e-88 329.3 271 61.6
PSO161G0033 Papaver somniferum HOM05D002474 ORTHO05D006727 4.2e-88 328.9 225 71.6
unitig_748.g8621 Utricularia gibba HOM05D002474 ORTHO05D006727 7.1e-88 328.2 238 68.5
VMungo0464G0136 Vigna mungo HOM05D002474 ORTHO05D006727 1.2e-87 327.4 296 58.4
FAN09G4837 Fragaria x ananassa HOM05D002474 ORTHO05D006727 2.1e-87 326.6 284 59.9
FAN02G0112 Fragaria x ananassa HOM05D002474 ORTHO05D006727 3.5e-87 325.9 284 59.9
ATR0609G116 Amborella trichopoda HOM05D002474 ORTHO05D006727 4.6e-87 325.5 260 63.8
Zm00001eb033100 Zea mays HOM05D002474 ORTHO05D006727 4.6e-87 325.5 236 67.8
THA.LOC104805441 Tarenaya hassleriana HOM05D002474 ORTHO05D006727 3.0e-86 322.8 273 61.5
FAN14G2185 Fragaria x ananassa HOM05D002474 ORTHO05D006727 3.9e-86 322.4 261 63.2
Lj2g0026556 Lotus japonicus HOM05D002474 ORTHO05D006727 3.9e-86 322.4 224 70.1
C04p46420 Brassica napus HOM05D002474 ORTHO05D006727 5.1e-86 322.0 283 59.7
Haze_14590 Corylus avellana HOM05D002474 ORTHO05D006727 6.7e-86 321.6 265 64.9
vmacro05750 Vaccinium macrocarpon HOM05D002474 ORTHO05D006727 8.7e-86 321.2 270 62.6
Os12g0638800 Oryza sativa ssp. japonica HOM05D002474 ORTHO05D006727 1.1e-85 320.9 237 65.4
AL7G50200 Arabidopsis lyrata HOM05D002474 ORTHO05D006727 2.5e-85 319.7 288 59.7
CARHR262240 Cardamine hirsuta HOM05D002474 ORTHO05D006727 2.5e-85 319.7 261 62.8
COL.COLO4_24935 Corchorus olitorius HOM05D002474 ORTHO05D006727 9.6e-85 317.8 201 78.6
AUR62031654 Chenopodium quinoa HOM05D002474 ORTHO05D006727 1.3e-84 317.4 219 70.3
ClCG09G018440 Citrullus lanatus HOM05D002474 ORTHO05D006727 1.6e-84 317.0 216 72.7
Rhsim10G0032000 Rhododendron simsii HOM05D002474 ORTHO05D006727 1.6e-84 317.0 266 63.2
AT5G39940 Arabidopsis thaliana HOM05D002474 ORTHO05D006727 2.8e-84 316.2 255 64.3
Carub.0007s3579 Capsella rubella HOM05D002474 ORTHO05D006727 6.2e-84 315.1 247 65.6
CDE08G1502 Ceratophyllum demersum HOM05D002474 ORTHO05D006727 8.1e-84 314.7 250 62.0
Hund13252 Selenicereus undatus HOM05D002474 ORTHO05D006727 3.1e-83 312.8 301 57.5
SGA_v2.0_scaffold224G42953 Striga asiatica HOM05D002474 ORTHO05D006727 9.0e-83 311.2 272 62.1
Aa31LG9G1670 Aethionema arabicum HOM05D002474 ORTHO05D006727 2.0e-82 310.1 288 58.0
BcaB06g27397 Brassica carinata HOM05D002474 ORTHO05D006727 6.4e-81 305.1 224 67.9
BraA04t16928Z Brassica rapa HOM05D002474 ORTHO05D006727 1.2e-79 300.8 284 56.7
Ah.12g065360 Amaranthus hybridus HOM05D002474 ORTHO05D006727 2.1e-79 300.1 212 67.9
A04p12710 Brassica napus HOM05D002474 ORTHO05D006727 4.6e-79 298.9 284 56.3
Duzib168G1861 Durio zibethinus HOM05D002474 ORTHO05D006727 7.9e-79 298.1 220 67.3
PGR083G0251 Punica granatum HOM05D002474 ORTHO05D006727 2.3e-78 296.6 232 65.1
EL10Ac2g02929 Beta vulgaris HOM05D002474 ORTHO05D006727 5.1e-78 295.4 228 64.5
Hma1.2p1_0449F.1_g154940 Hydrangea macrophylla HOM05D002474 ORTHO05D006727 4.3e-77 292.4 236 65.3
Rhsim10G0031600 Rhododendron simsii HOM05D002474 ORTHO05D006727 4.3e-77 292.4 241 64.7
Thhalv10028129m.g Eutrema salsugineum HOM05D002474 ORTHO05D006727 5.6e-77 292.0 255 60.8
CANSAT64G2711 Cannabis sativa HOM05D002474 ORTHO05D006727 2.5e-72 276.6 262 56.5
Pp3c23_2270 Physcomitrium patens HOM05D002474 ORTHO05D006727 1.8e-70 270.4 238 58.8
AagrBONN_evm.TU.Sc2ySwM_369.199 Anthoceros agrestis HOM05D002474 ORTHO05D006727 1.8e-67 260.4 235 56.6
SalBow1G0883 Salvia bowleyana HOM05D002474 ORTHO05D006727 2.9e-65 253.1 259 55.2
Hund13251 Selenicereus undatus HOM05D002474 ORTHO05D006727 9.3e-64 248.1 194 67.0
CSS0037906 Camellia sinensis var. sinensis HOM05D002474 ORTHO05D006727 1.3e-60 237.7 155 76.1
BolC4t26228H Brassica oleracea HOM05D002474 ORTHO05D006727 2.2e-60 236.9 216 57.9
Dinv33713 Davidia involucrata HOM05D002474 ORTHO05D006727 8.2e-60 235.0 155 73.5
Mapoly0035s0063 Marchantia polymorpha HOM05D002474 ORTHO05D006727 2.4e-59 233.4 226 54.4
AUR62018296 Chenopodium quinoa HOM05D002474 ORTHO05D006727 6.9e-59 231.9 212 57.1
SMO137G0254 Selaginella moellendorffii HOM05D002474 ORTHO05D006727 5.0e-57 225.7 226 52.2
HanXRQChr16g0519921 Helianthus annuus HOM05D002474 ORTHO05D006727 3.7e-52 209.5 162 64.8
SpUN0485_0010 Schrenkiella parvula HOM05D002474 ORTHO05D006727 6.3e-44 182.2 128 68.0
Lj7A402G47 Lonicera japonica HOM05D002474 ORTHO05D006727 1.0e-41 174.9 142 64.1
HanXRQChr09g0265421 Helianthus annuus HOM05D002474 ORTHO05D006727 3.6e-39 166.4 121 64.5
CBR_g59258 Chara braunii HOM05D002474 ORTHO05D006727 8.8e-38 161.8 122 61.5
Actinidia35021 Actinidia chinensis HOM05D002474 ORTHO05D006727 1.2e-31 141.4 253 40.3
Sp7g01810 Schrenkiella parvula HOM05D002474 ORTHO05D006727 1.2e-31 141.4 134 54.5
SEGI_37465 Sequoiadendron giganteum HOM05D002474 ORTHO05D006727 2.3e-30 137.1 87 66.7
HPP92_014139 Vanilla planifolia HOM05D002474 ORTHO05D006727 3.7e-28 129.8 88 64.8
Lj7A402G46 Lonicera japonica HOM05D002474 ORTHO05D006727 5.5e-24 115.9 99 64.6
MBI04_g20672_MAGBIO Magnolia biondii HOM05D002474 ORTHO05D006727 2.1e-23 114.0 232 35.3
SEGI_13584 Sequoiadendron giganteum HOM05D002474 ORTHO05D006727 1.8e-22 110.9 112 50.9
Lsat_1_v5_gn_6_77521 Lactuca sativa HOM05D002474 ORTHO05D006727 1.2e-21 108.2 164 39.0
Rhsim10G0031800 Rhododendron simsii HOM05D002474 ORTHO05D006727 6.1e-15 85.9 53 71.7
CBR_g50657 Chara braunii HOM05D002474 ORTHO05D006727 4.0e-14 83.2 112 44.6
Lsat_1_v5_gn_2_107941 Lactuca sativa HOM05D002474 ORTHO05D005260 2.3e-09 67.4 60 50.0
MCO07G529 Micromonas commoda HOM05D002474 ORTHO05D006727 1.4e-06 58.2 242 27.3


User provided reference genes

Program Settings