Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc07_g02450 Coffea canephora HOM05D006711 ORTHO05D008104 1.9e-37 158.7 79 100.0
Migut.N03365 Erythranthe guttata HOM05D006711 ORTHO05D008104 4.9e-30 134.0 79 84.8
Hma1.2p1_0697F.1_g204840 Hydrangea macrophylla HOM05D006711 ORTHO05D008104 1.1e-29 132.9 79 83.5
SalBow6G5258 Salvia bowleyana HOM05D006711 ORTHO05D008104 2.4e-29 131.7 79 83.5
vmacro05808 Vaccinium macrocarpon HOM05D006711 ORTHO05D008104 2.4e-29 131.7 79 84.8
Oeu059193.1 Olea europaea HOM05D006711 ORTHO05D008104 7.1e-29 130.2 79 81.0
Oeu047317.1 Olea europaea HOM05D006711 ORTHO05D008104 3.5e-28 127.9 79 79.7
Actinidia33966 Actinidia chinensis HOM05D006711 ORTHO05D008104 4.6e-28 127.5 79 79.7
PSO063G1690 Papaver somniferum HOM05D006711 ORTHO05D008104 1.3e-27 125.9 78 78.2
PSO832G1815 Papaver somniferum HOM05D006711 ORTHO05D008104 1.3e-27 125.9 78 78.2
Aqoxy3G00948 Aquilegia oxysepala HOM05D006711 ORTHO05D008104 1.7e-27 125.6 80 80.0
PSO478G1559 Papaver somniferum HOM05D006711 ORTHO05D008104 1.7e-27 125.6 76 81.6
Sabra12G0055800 Salix brachista HOM05D006711 ORTHO05D008104 5.1e-27 124.0 76 80.3
DCAR_011220 Daucus carota HOM05D006711 ORTHO05D008104 6.6e-27 123.6 79 77.2
Manes.14G068400 Manihot esculenta HOM05D006711 ORTHO05D008104 6.6e-27 123.6 76 81.6
Potri.012G078000 Populus trichocarpa HOM05D006711 ORTHO05D008104 6.6e-27 123.6 76 81.6
Potri.015G073300 Populus trichocarpa HOM05D006711 ORTHO05D008104 6.6e-27 123.6 76 81.6
PSO017G6527 Papaver somniferum HOM05D006711 ORTHO05D008104 8.7e-27 123.2 76 81.6
Sabra15G0097500 Salix brachista HOM05D006711 ORTHO05D008104 8.7e-27 123.2 76 80.3
GSVIVG01032507001 Vitis vinifera HOM05D006711 ORTHO05D008104 8.7e-27 123.2 77 76.6
Ca_21901_v3 Cicer arietinum L. HOM05D006711 ORTHO05D008104 1.1e-26 122.9 76 81.6
CANSAT11G1423 Cannabis sativa HOM05D006711 ORTHO05D008104 1.9e-26 122.1 76 77.6
Cfa019085 Carpinus fangiana HOM05D006711 ORTHO05D008104 1.9e-26 122.1 75 82.7
Duzib084G0075 Durio zibethinus HOM05D006711 ORTHO05D008104 1.9e-26 122.1 76 80.3
FvH4_5g05020 Fragaria vesca HOM05D006711 ORTHO05D008104 1.9e-26 122.1 76 80.3
FAN04G0211 Fragaria x ananassa HOM05D006711 ORTHO05D008104 1.9e-26 122.1 76 80.3
FAN08G2471 Fragaria x ananassa HOM05D006711 ORTHO05D008104 1.9e-26 122.1 76 80.3
FAN13G1278 Fragaria x ananassa HOM05D006711 ORTHO05D008104 1.9e-26 122.1 76 80.3
FAN18G1479 Fragaria x ananassa HOM05D006711 ORTHO05D008104 1.9e-26 122.1 76 80.3
FAN18G2156 Fragaria x ananassa HOM05D006711 ORTHO05D008104 1.9e-26 122.1 76 80.3
THA.LOC104798980 Tarenaya hassleriana HOM05D000086 ORTHO05D008104 1.9e-26 122.1 76 81.6
MBI15_g24174_MAGBIO Magnolia biondii HOM05D006711 ORTHO05D008104 2.5e-26 121.7 75 81.3
ATR1149G012 Amborella trichopoda HOM05D006711 ORTHO05D008104 3.3e-26 121.3 79 79.7
AUR62031000 Chenopodium quinoa HOM05D006711 ORTHO05D008104 3.3e-26 121.3 76 78.9
Hund09419 Selenicereus undatus HOM05D006711 ORTHO05D008104 3.3e-26 121.3 76 80.3
Sc04g0001970 Simmondsia chinensis HOM05D006711 ORTHO05D008104 3.3e-26 121.3 77 76.6
THA.LOC104821460 Tarenaya hassleriana HOM05D006711 ORTHO05D008104 3.3e-26 121.3 76 81.6
Medtr4g106700 Medicago truncatula HOM05D006711 ORTHO05D008104 4.3e-26 120.9 76 80.3
Aa31LG11G810 Aethionema arabicum HOM05D006711 ORTHO05D008104 5.6e-26 120.6 76 78.9
Gohir.A12G275900 Gossypium hirsutum HOM05D006711 ORTHO05D008104 5.6e-26 120.6 76 80.3
Gorai.008G297100 Gossypium raimondii HOM05D006711 ORTHO05D008104 5.6e-26 120.6 76 80.3
Thecc.03G007500 Theobroma cacao HOM05D006711 ORTHO05D008104 5.6e-26 120.6 76 80.3
Gohir.D12G276600 Gossypium hirsutum HOM05D006711 ORTHO05D008104 7.3e-26 120.2 76 80.3
Sp5g13950 Schrenkiella parvula HOM05D006711 ORTHO05D008104 7.3e-26 120.2 76 77.6
Aa31LG4G16690 Aethionema arabicum HOM05D006711 ORTHO05D008104 9.6e-26 119.8 76 77.6
AL5G27360 Arabidopsis lyrata HOM05D006711 ORTHO05D008104 9.6e-26 119.8 76 77.6
CARHR156770 Cardamine hirsuta HOM05D006711 ORTHO05D008104 9.6e-26 119.8 76 77.6
BcaB01g00848 Brassica carinata HOM05D006711 ORTHO05D008104 1.2e-25 119.4 70 84.3
Thhalv10010870m.g Eutrema salsugineum HOM05D006711 ORTHO05D008104 1.2e-25 119.4 76 76.3
EL10Ac5g10797 Beta vulgaris HOM05D006711 ORTHO05D008104 1.6e-25 119.0 76 77.6
CiPaw.12G024900 Carya illinoinensis HOM05D006711 ORTHO05D008104 1.6e-25 119.0 88 72.7
Eucgr.K02867 Eucalyptus grandis HOM05D006711 ORTHO05D008104 1.6e-25 119.0 75 80.0
Lj4g0001750 Lotus japonicus HOM05D006711 ORTHO05D008104 1.6e-25 119.0 74 81.1
Ah.10g035450 Amaranthus hybridus HOM05D006711 ORTHO05D008104 2.1e-25 118.6 76 77.6
Duzib068G0631 Durio zibethinus HOM05D006711 ORTHO05D008104 2.1e-25 118.6 76 78.9
Nitab4.5_0004762g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 2.8e-25 118.2 76 75.0
HanXRQChr09g0265981 Helianthus annuus HOM05D006711 ORTHO05D008104 3.6e-25 117.9 76 80.3
Peaxi162Scf00429g00118 Petunia axillaris HOM05D006711 ORTHO05D008104 3.6e-25 117.9 76 73.7
PGR044G2080 Punica granatum HOM05D006711 ORTHO05D008104 3.6e-25 117.9 75 80.0
COL.COLO4_24770 Corchorus olitorius HOM05D006711 ORTHO05D008104 4.7e-25 117.5 76 78.9
MD06G1177900 Malus domestica HOM05D006711 ORTHO05D008104 4.7e-25 117.5 76 77.6
MD14G1184500 Malus domestica HOM05D006711 ORTHO05D008104 4.7e-25 117.5 76 77.6
Oeu006591.3 Olea europaea HOM05D006711 ORTHO05D008104 4.7e-25 117.5 102 63.7
BcaC07g39289 Brassica carinata HOM05D006711 ORTHO05D008104 6.2e-25 117.1 70 82.9
A06p19610 Brassica napus HOM05D006711 ORTHO05D008104 6.2e-25 117.1 70 82.9
C08p22960 Brassica napus HOM05D006711 ORTHO05D008104 6.2e-25 117.1 70 82.9
BolC8t49933H Brassica oleracea HOM05D006711 ORTHO05D008104 6.2e-25 117.1 70 82.9
BraA06t25041Z Brassica rapa HOM05D006711 ORTHO05D008104 6.2e-25 117.1 70 82.9
Sed0004980 Sechium edule HOM05D006711 ORTHO05D008104 1.1e-24 116.3 76 76.3
Nitab4.5_0002792g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 1.4e-24 115.9 76 73.7
Ciclev10023110m.g Citrus clementina HOM05D006711 ORTHO05D008104 1.8e-24 115.5 76 77.6
Sopen11g029530 Solanum pennellii HOM05D006711 ORTHO05D008104 2.4e-24 115.2 76 72.4
Atru.chr9.2428 Acer truncatum HOM05D006711 ORTHO05D008104 3.1e-24 114.8 76 75.0
Cpa.g.sc134.10 Carica papaya HOM05D006711 ORTHO05D008104 3.1e-24 114.8 69 81.2
Glyma.05G035600 Glycine max HOM05D006711 ORTHO05D008104 4.0e-24 114.4 68 82.4
Lsat_1_v5_gn_4_181601 Lactuca sativa HOM05D006711 ORTHO05D008104 4.0e-24 114.4 73 80.8
Psat4g057240 Pisum sativum HOM05D006711 ORTHO05D008104 4.0e-24 114.4 76 76.3
arahy.Tifrunner.gnm1.ann1.5NY27E Arachis hypogaea HOM05D006711 ORTHO05D008104 5.2e-24 114.0 65 87.7
TPR.G37552 Trifolium pratense HOM05D006711 ORTHO05D008104 5.2e-24 114.0 68 83.8
ClCG01G014050 Citrullus lanatus HOM05D006711 ORTHO05D008104 6.9e-24 113.6 76 73.7
CDE10G0118 Ceratophyllum demersum HOM05D001322 ORTHO05D001301 9.0e-24 113.2 69 78.3
Prupe.5G177100 Prunus persica HOM05D006711 ORTHO05D008104 9.0e-24 113.2 69 81.2
GSVIVG01007800001 Vitis vinifera HOM05D006711 ORTHO05D008104 9.0e-24 113.2 72 76.4
HanXRQChr12g0385511 Helianthus annuus HOM05D006711 ORTHO05D008104 1.2e-23 112.8 79 72.2
CDE10G0426 Ceratophyllum demersum HOM05D006711 ORTHO05D008104 2.0e-23 112.1 69 76.8
CsaV3_1G008300 Cucumis sativus L. HOM05D006711 ORTHO05D008104 2.0e-23 112.1 76 73.7
Phvul.003G198200 Phaseolus vulgaris HOM05D006711 ORTHO05D008104 2.0e-23 112.1 68 80.9
TWI15G0492 Tripterygium wilfordii HOM05D006711 ORTHO05D008104 2.0e-23 112.1 69 81.2
CAN.G742.33 Capsicum annuum HOM05D006711 ORTHO05D008104 3.4e-23 111.3 76 69.7
HPP92_010905 Vanilla planifolia HOM05D006711 ORTHO05D008104 3.4e-23 111.3 77 70.1
HPP92_010907 Vanilla planifolia HOM05D006711 ORTHO05D008104 3.4e-23 111.3 77 70.1
AUR62008246 Chenopodium quinoa HOM05D001451 ORTHO05D008104 4.4e-23 110.9 68 80.9
MELO3C002246.2 Cucumis melo HOM05D006711 ORTHO05D008104 9.9e-23 109.8 76 72.4
Os09g0375900 Oryza sativa ssp. japonica HOM05D006711 ORTHO05D008104 9.9e-23 109.8 70 77.1
Zm00001eb311470 Zea mays HOM05D006711 ORTHO05D008104 9.9e-23 109.8 66 81.8
CiPaw.11G029900 Carya illinoinensis HOM05D006711 ORTHO05D008104 4.9e-22 107.5 67 80.6
unitig_46.g17997 Utricularia gibba HOM05D006711 ORTHO05D008104 4.9e-22 107.5 95 62.1
Eucgr.J02179 Eucalyptus grandis HOM05D006711 ORTHO05D008104 8.4e-22 106.7 77 67.5
Carub.0005s1414 Capsella rubella HOM05D000086 ORTHO05D008104 2.1e-20 102.1 68 73.5
TAR622G0690 Trochodendron aralioides HOM05D001464 ORTHO05D002836 4.6e-20 100.9 61 80.3
Rhsim10G0024900 Rhododendron simsii HOM05D006711 ORTHO05D008104 2.3e-19 98.6 154 42.9
Rhsim08G0056600 Rhododendron simsii HOM05D000086 ORTHO05D000983 3.9e-19 97.8 60 81.7
Nn4g22854 Nelumbo nucifera HOM05D006711 ORTHO05D008104 8.7e-19 96.7 60 76.7
PGSC0003DMG400003004 Solanum tuberosum HOM05D006711 ORTHO05D008104 1.9e-18 95.5 121 46.3
Lalb_Chr12g0201501 Lupinus albus HOM05D006711 ORTHO05D008104 2.5e-18 95.1 67 68.7
Rhsim10G0024700 Rhododendron simsii HOM05D006711 ORTHO05D008104 1.3e-17 92.8 54 88.9
Sed0016611 Sechium edule HOM05D006711 ORTHO05D008104 1.3e-17 92.8 76 64.5
SEGI_30617 Sequoiadendron giganteum HOM05D006711 ORTHO05D008104 1.3e-17 92.8 69 65.2
RcHm_v2.0_Chr7g0194021 Rosa chinensis HOM05D006711 ORTHO05D008104 2.8e-17 91.7 51 90.2
Haze_07479 Corylus avellana HOM05D006711 ORTHO05D008104 4.8e-17 90.9 50 92.0
QL10p013547 Quercus lobata HOM05D006711 ORTHO05D008104 3.1e-16 88.2 51 86.3
CSS0024346 Camellia sinensis var. sinensis HOM05D006711 ORTHO05D008104 2.0e-15 85.5 50 86.0
CBR_g49624 Chara braunii HOM05D006711 ORTHO05D008104 3.4e-15 84.7 66 66.7
ATR0820G148 Amborella trichopoda HOM05D006711 ORTHO05D008104 4.5e-15 84.3 67 68.7
ATR0661G003 Amborella trichopoda HOM05D006711 ORTHO05D008104 1.7e-14 82.4 68 66.2
Mapoly0124s0028 Marchantia polymorpha HOM05D006711 ORTHO05D008104 2.9e-14 81.6 67 64.2
Pp3c14_16830 Physcomitrium patens HOM05D006711 ORTHO05D008104 3.2e-13 78.2 69 56.5
Pp3c3_16770 Physcomitrium patens HOM05D006711 ORTHO05D008104 5.4e-13 77.4 69 63.8
AagrBONN_evm.TU.Sc2ySwM_368.1224 Anthoceros agrestis HOM05D006711 ORTHO05D008104 1.2e-12 76.3 64 64.1
PRCOL_00004863 Prasinoderma coloniale HOM05D006711 ORTHO05D008104 3.9e-11 71.2 67 55.2
Dinv35040 Davidia involucrata HOM05D006711 ORTHO05D008104 4.8e-09 64.3 39 84.6
HPP92_016979 Vanilla planifolia HOM05D006711 ORTHO05D008104 2.4e-08 62.0 37 83.8
Nn3g16941 Nelumbo nucifera HOM05D006711 ORTHO05D008104 4.0e-08 61.2 51 58.8
SHI34267 Sapria himalayana HOM05D006711 ORTHO05D008104 3.8e-06 54.7 34 79.4


User provided reference genes

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