Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc07_g02080 Coffea canephora HOM05D005169 ORTHO05D006436 9.9e-112 406.8 199 100.0
Dinv35078 Davidia involucrata HOM05D005169 ORTHO05D006436 3.7e-42 175.6 193 53.4
QL02p075994 Quercus lobata HOM05D005169 ORTHO05D006436 2.9e-39 166.0 191 48.7
Dinv33480 Davidia involucrata HOM05D005169 ORTHO05D006436 1.1e-38 164.1 194 51.0
Cfa007415 Carpinus fangiana HOM05D005169 ORTHO05D006436 2.5e-38 162.9 200 49.0
Haze_14687 Corylus avellana HOM05D005169 ORTHO05D006436 7.2e-38 161.4 205 47.8
Nitab4.5_0002416g0060 Nicotiana tabacum HOM05D005169 ORTHO05D006436 2.7e-37 159.5 193 45.6
vmacro05837 Vaccinium macrocarpon HOM05D005169 ORTHO05D006436 6.1e-37 158.3 201 47.8
CiPaw.03G039400 Carya illinoinensis HOM05D005169 ORTHO05D006436 1.8e-36 156.8 191 50.3
Lju41C36T6 Lonicera japonica HOM05D005169 ORTHO05D006436 8.8e-36 154.5 181 50.3
Nitab4.5_0002306g0060 Nicotiana tabacum HOM05D005169 ORTHO05D006436 1.5e-35 153.7 162 49.4
CSS0037801 Camellia sinensis var. sinensis HOM05D005169 ORTHO05D006436 4.4e-35 152.1 194 46.4
Peaxi162Scf00700g00522 Petunia axillaris HOM05D005169 ORTHO05D006436 4.4e-35 152.1 186 47.3
TAR622G1423 Trochodendron aralioides HOM05D005169 ORTHO05D006436 4.4e-35 152.1 195 46.7
Actinidia36094 Actinidia chinensis HOM05D005169 ORTHO05D006436 9.8e-35 151.0 176 53.4
Oeu062928.1 Olea europaea HOM05D005169 ORTHO05D006436 9.8e-35 151.0 179 50.3
Potri.001G349700 Populus trichocarpa HOM05D005169 ORTHO05D006436 4.8e-34 148.7 168 50.6
Peaxi162Scf00129g00124 Petunia axillaris HOM05D005169 ORTHO05D006436 6.3e-34 148.3 178 44.9
TAR629G1679 Trochodendron aralioides HOM05D005169 ORTHO05D006436 6.3e-34 148.3 192 49.0
Nitab4.5_0014517g0010 Nicotiana tabacum HOM05D005169 ORTHO05D006436 1.8e-33 146.7 210 43.8
MD17G1033200 Malus domestica HOM05D005169 ORTHO05D006436 3.5e-32 142.5 183 47.0
Gohir.A09G026900 Gossypium hirsutum HOM05D005169 ORTHO05D006436 1.0e-31 141.0 153 50.3
COL.COLO4_28998 Corchorus olitorius HOM05D005169 ORTHO05D006436 1.3e-31 140.6 165 47.3
Gorai.006G030600 Gossypium raimondii HOM05D005169 ORTHO05D006436 1.3e-31 140.6 195 45.1
Thecc.04G011300 Theobroma cacao HOM05D005169 ORTHO05D006436 3.8e-31 139.0 154 50.6
Rhsim10G0020400 Rhododendron simsii HOM05D005169 ORTHO05D006256 5.0e-31 138.7 194 45.4
Sabra16G0229100 Salix brachista HOM05D005169 ORTHO05D006436 5.0e-31 138.7 182 50.0
Gohir.D09G026600 Gossypium hirsutum HOM05D005169 ORTHO05D006436 1.5e-30 137.1 158 51.3
Migut.K01374 Erythranthe guttata HOM05D005169 ORTHO05D006436 1.9e-30 136.7 161 47.8
ClCG09G019030 Citrullus lanatus HOM05D005169 ORTHO05D006436 2.5e-30 136.3 168 47.6
Manes.15G165700 Manihot esculenta HOM05D005169 ORTHO05D006436 5.5e-30 135.2 156 48.1
Oeu014861.1 Olea europaea HOM05D005169 ORTHO05D006436 9.5e-30 134.4 165 47.9
Prupe.3G286300 Prunus persica HOM05D005169 ORTHO05D006436 9.5e-30 134.4 194 42.3
Gohir.D11G070900 Gossypium hirsutum HOM05D005169 ORTHO05D006436 1.2e-29 134.0 153 49.0
Gorai.007G076200 Gossypium raimondii HOM05D005169 ORTHO05D006436 1.2e-29 134.0 153 49.0
Oeu043043.1 Olea europaea HOM05D005169 ORTHO05D006436 2.1e-29 133.3 171 47.4
MSTRG.3296 Avicennia marina HOM05D005169 ORTHO05D006436 2.8e-29 132.9 166 48.2
MELO3C021551.2 Cucumis melo HOM05D005169 ORTHO05D006436 2.8e-29 132.9 168 46.4
CsaV3_5G027330 Cucumis sativus L. HOM05D005169 ORTHO05D005030 1.0e-28 131.0 189 42.3
THA.LOC104821080 Tarenaya hassleriana HOM05D005169 ORTHO05D006436 2.3e-28 129.8 187 46.0
Atru.chr6.2317 Acer truncatum HOM05D005169 ORTHO05D006256 5.2e-28 128.6 163 47.9
Gohir.A11G067000 Gossypium hirsutum HOM05D005169 ORTHO05D006436 5.2e-28 128.6 153 47.7
PGSC0003DMG400000520 Solanum tuberosum HOM05D005169 ORTHO05D006436 8.8e-28 127.9 183 42.6
HanXRQChr09g0266101 Helianthus annuus HOM05D005169 ORTHO05D006436 1.5e-27 127.1 161 45.3
PSO017G2305 Papaver somniferum HOM05D005169 ORTHO05D006436 2.0e-27 126.7 177 41.2
Solyc02g086760.1 Solanum lycopersicum HOM05D005169 ORTHO05D006436 2.6e-27 126.3 188 42.0
Sopen02g031520 Solanum pennellii HOM05D005169 ORTHO05D006436 3.4e-27 125.9 189 41.8
Solyc12g062840.1 Solanum lycopersicum HOM05D005169 ORTHO05D006436 5.7e-27 125.2 158 44.9
Nn3g16854 Nelumbo nucifera HOM05D005169 ORTHO05D006436 7.5e-27 124.8 176 43.8
SGA_v2.0_scaffold30G12455 Striga asiatica HOM05D005169 ORTHO05D006436 7.5e-27 124.8 180 47.2
Lsat_1_v5_gn_4_182740 Lactuca sativa HOM05D005169 ORTHO05D006436 2.2e-26 123.2 149 48.3
PSO478G0492 Papaver somniferum HOM05D005169 ORTHO05D006436 2.2e-26 123.2 185 38.9
AUR62023410 Chenopodium quinoa HOM05D005169 ORTHO05D006436 2.8e-26 122.9 179 42.5
SalBow7G2461 Salvia bowleyana HOM05D005169 ORTHO05D006436 2.8e-26 122.9 166 45.2
AUR62013741 Chenopodium quinoa HOM05D005169 ORTHO05D006436 6.3e-26 121.7 181 42.5
TWI56G0416 Tripterygium wilfordii HOM05D005169 ORTHO05D006436 6.3e-26 121.7 156 46.2
ECA232G1653 Erigeron canadensis HOM05D005169 ORTHO05D006436 1.8e-25 120.2 146 45.9
Ciclev10016934m.g Citrus clementina HOM05D005169 ORTHO05D006436 3.1e-25 119.4 148 46.6
FAN09G4345 Fragaria x ananassa HOM05D005169 ORTHO05D006436 3.1e-25 119.4 156 43.6
MBI16_g27097_MAGBIO Magnolia biondii HOM05D005169 ORTHO05D006436 5.4e-25 118.6 162 42.6
SHI27192 Sapria himalayana HOM05D005169 ORTHO05D006436 5.4e-25 118.6 162 43.8
HanXRQChr07g0198841 Helianthus annuus HOM05D005169 ORTHO05D006436 7.0e-25 118.2 166 42.8
PGR142G3938 Punica granatum HOM05D005169 ORTHO05D006436 7.0e-25 118.2 160 45.6
Psat1g056600 Pisum sativum HOM05D005169 ORTHO05D006436 1.2e-24 117.5 156 41.7
BolC9t59083H Brassica oleracea HOM05D005169 ORTHO05D006436 1.6e-24 117.1 211 37.9
Hma1.2p1_0858F.1_g229310 Hydrangea macrophylla HOM05D005169 ORTHO05D006436 1.6e-24 117.1 160 40.6
Lsat_1_v5_gn_2_91781 Lactuca sativa HOM05D005169 ORTHO05D006436 1.6e-24 117.1 156 44.9
BraA10t44462Z Brassica rapa HOM05D005169 ORTHO05D006436 2.0e-24 116.7 208 37.5
A10p23980 Brassica napus HOM05D005169 ORTHO05D006436 3.5e-24 115.9 208 37.0
SGA_v2.0_scaffold135G34886 Striga asiatica HOM05D005169 ORTHO05D006436 3.5e-24 115.9 153 45.8
EL10Ac1g00764 Beta vulgaris HOM05D005169 ORTHO05D006436 5.9e-24 115.2 185 40.0
FvH4_6g50860 Fragaria vesca HOM05D005169 ORTHO05D006436 5.9e-24 115.2 200 37.5
C09p62450 Brassica napus HOM05D005169 ORTHO05D006436 7.8e-24 114.8 199 39.7
Sed0004184 Sechium edule HOM05D005169 ORTHO05D006436 7.8e-24 114.8 155 41.3
CARHR198620 Cardamine hirsuta HOM05D005169 ORTHO05D006436 2.3e-23 113.2 223 36.3
Migut.H00106 Erythranthe guttata HOM05D005169 ORTHO05D006436 2.3e-23 113.2 157 45.9
CANSAT64G1588 Cannabis sativa HOM05D005169 ORTHO05D006436 5.0e-23 112.1 183 41.0
PSO170G4554 Papaver somniferum HOM05D005169 ORTHO05D006436 1.1e-22 110.9 208 36.1
A05p44490 Brassica napus HOM05D005169 ORTHO05D006436 1.9e-22 110.2 159 44.0
C09p75080 Brassica napus HOM05D005169 ORTHO05D006436 1.9e-22 110.2 187 42.2
BolC5t35156H Brassica oleracea HOM05D005169 ORTHO05D006436 1.9e-22 110.2 187 42.2
BraA05t23207Z Brassica rapa HOM05D005169 ORTHO05D006436 1.9e-22 110.2 159 44.0
CARHR075420 Cardamine hirsuta HOM05D005169 ORTHO05D006436 2.5e-22 109.8 186 38.7
Lalb_Chr06g0175951 Lupinus albus HOM05D005169 ORTHO05D006436 3.3e-22 109.4 155 41.9
Ah.05g173110 Amaranthus hybridus HOM05D005169 ORTHO05D006436 5.6e-22 108.6 187 36.9
BcaC05g30410 Brassica carinata HOM05D005169 ORTHO05D006436 5.6e-22 108.6 187 41.7
Thhalv10021959m.g Eutrema salsugineum HOM05D005169 ORTHO05D006436 5.6e-22 108.6 158 39.9
FAN05G3636 Fragaria x ananassa HOM05D005169 ORTHO05D006436 5.6e-22 108.6 149 41.6
Medtr6g406210 Medicago truncatula HOM05D005169 ORTHO05D006436 5.6e-22 108.6 164 39.0
Carub.0006s1286 Capsella rubella HOM05D005169 ORTHO05D006436 9.5e-22 107.8 203 36.9
FAN14G0546 Fragaria x ananassa HOM05D005169 ORTHO05D006436 1.6e-21 107.1 194 37.1
AT3G01516 Arabidopsis thaliana HOM05D005169 ORTHO05D006436 4.7e-21 105.5 183 38.8
RcHm_v2.0_Chr2g0172251 Rosa chinensis HOM05D005169 ORTHO05D006436 4.7e-21 105.5 150 40.7
Carub.0003s0056 Capsella rubella HOM05D005169 ORTHO05D006436 6.1e-21 105.1 151 40.4
Psat1g056720 Pisum sativum HOM05D005169 ORTHO05D006436 6.1e-21 105.1 160 37.5
BcaC05g30449 Brassica carinata HOM05D005169 ORTHO05D006436 1.0e-20 104.4 189 40.7
Sp3g00540 Schrenkiella parvula HOM05D005169 ORTHO05D006436 1.0e-20 104.4 177 39.0
DCAR_015051 Daucus carota HOM05D005169 ORTHO05D006436 1.8e-20 103.6 177 38.4
Glyma.05G006400 Glycine max HOM05D005169 ORTHO05D006436 4.0e-20 102.4 157 38.2
PSO144G0121 Papaver somniferum HOM05D005169 ORTHO05D006436 4.0e-20 102.4 175 37.1
Aa31LG5G10650 Aethionema arabicum HOM05D005169 ORTHO05D006436 1.5e-19 100.5 163 39.9
AL3G10640 Arabidopsis lyrata HOM05D005169 ORTHO05D006436 1.5e-19 100.5 176 37.5
BcaC03g13455 Brassica carinata HOM05D005169 ORTHO05D006436 2.0e-19 100.1 162 38.9
AL6G25460 Arabidopsis lyrata HOM05D005169 ORTHO05D006436 7.5e-19 98.2 218 33.9
Sopen12g026520 Solanum pennellii HOM05D005169 ORTHO05D006436 9.8e-19 97.8 68 67.6
FAN05G4915 Fragaria x ananassa HOM05D005169 ORTHO05D006436 3.7e-18 95.9 196 33.7
BcaNung03104 Brassica carinata HOM05D005169 ORTHO05D006436 8.3e-18 94.7 188 37.8
ATR0730G202 Amborella trichopoda HOM05D005169 ORTHO05D006436 1.1e-17 94.4 147 40.8
Lalb_Chr21g0319501 Lupinus albus HOM05D005169 ORTHO05D006436 5.4e-17 92.0 147 36.1
Sp6g29350 Schrenkiella parvula HOM05D005169 ORTHO05D006436 5.4e-17 92.0 188 33.5
Sc16g0007930 Simmondsia chinensis HOM05D005169 ORTHO05D006436 7.0e-17 91.7 161 34.8
Aa31LG11G14770 Aethionema arabicum HOM05D005169 ORTHO05D006436 1.6e-16 90.5 247 32.0
Glyma.19G006800 Glycine max HOM05D005169 ORTHO05D006436 2.0e-16 90.1 157 35.7
DCAR_021693 Daucus carota HOM05D005169 ORTHO05D006436 3.5e-16 89.4 145 37.2
Thhalv10014646m.g Eutrema salsugineum HOM05D005169 ORTHO05D006436 2.3e-15 86.7 191 33.0
TPR.G10806 Trifolium pratense HOM05D005169 ORTHO05D006436 3.9e-15 85.9 74 52.7
TPR.G35382 Trifolium pratense HOM05D005169 ORTHO05D006436 6.6e-15 85.1 133 36.8
BraA02t05235Z Brassica rapa HOM05D005169 ORTHO05D006436 1.9e-14 83.6 182 34.1
AT5G14690 Arabidopsis thaliana HOM05D005169 ORTHO05D006436 3.3e-14 82.8 221 29.4
Cpa.g.sc3104.1 Carica papaya HOM05D005169 ORTHO05D006436 7.3e-14 81.6 67 56.7
unitig_899.g15487 Utricularia gibba HOM05D005169 ORTHO05D006436 4.7e-13 79.0 144 32.6
CDE07G0703 Ceratophyllum demersum HOM05D005169 ORTHO05D006436 4.0e-12 75.9 132 33.3
HPP92_008039 Vanilla planifolia HOM05D005169 ORTHO05D006436 8.9e-12 74.7 187 33.2
Duzib147G0144 Durio zibethinus HOM05D005169 ORTHO05D006436 2.0e-11 73.6 125 39.2
HPP92_024720 Vanilla planifolia HOM05D005169 ORTHO05D006436 2.0e-11 73.6 135 36.3
C02p07220 Brassica napus HOM05D005169 ORTHO05D006436 1.3e-10 70.9 82 47.6
BolC2t06654H Brassica oleracea HOM05D005169 ORTHO05D006436 1.3e-10 70.9 82 47.6
Ah.03g141220 Amaranthus hybridus HOM05D005169 ORTHO05D006436 2.2e-10 70.1 71 47.9
MD09G1031300 Malus domestica HOM05D005169 ORTHO05D006436 8.3e-10 68.2 110 43.6
Os01g0638800 Oryza sativa ssp. japonica HOM05D005169 ORTHO05D006436 4.1e-09 65.9 170 29.4
SEGI_21704 Sequoiadendron giganteum HOM05D005169 ORTHO05D006436 1.6e-08 63.9 143 28.7
Zm00001eb157680 Zea mays HOM05D005169 ORTHO05D006436 2.7e-08 63.2 175 28.6
SEGI_19138 Sequoiadendron giganteum HOM05D005169 ORTHO05D006436 3.0e-07 59.7 134 32.8
Zm00001eb296260 Zea mays HOM05D005169 ORTHO05D006436 2.5e-06 56.6 171 31.0


User provided reference genes

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