Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc07_g01640 Coffea canephora HOM05D007622 ORTHO05D009409 2.3e-63 245.4 118 100.0
Nitab4.5_0003318g0060 Nicotiana tabacum HOM05D007622 ORTHO05D009409 8.9e-44 180.3 115 77.4
Peaxi162Scf00129g01661 Petunia axillaris HOM05D007622 ORTHO05D009409 1.5e-43 179.5 115 77.4
Actinidia16945 Actinidia chinensis HOM05D007622 ORTHO05D009409 2.6e-43 178.7 112 80.4
CSS0000151 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 7.5e-43 177.2 120 72.5
CSS0044104 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 7.5e-43 177.2 120 72.5
Potri.017G071300 Populus trichocarpa HOM05D007622 ORTHO05D009409 7.5e-43 177.2 118 74.6
PGR083G1671 Punica granatum HOM05D007622 ORTHO05D009409 7.5e-43 177.2 118 70.3
COL.COLO4_29125 Corchorus olitorius HOM05D000285 ORTHO05D009409 9.8e-43 176.8 110 76.4
Oeu013968.1 Olea europaea HOM05D007622 ORTHO05D009409 9.8e-43 176.8 98 81.6
Nitab4.5_0001860g0100 Nicotiana tabacum HOM05D007622 ORTHO05D009409 1.7e-42 176.0 115 74.8
Solyc02g093350.3 Solanum lycopersicum HOM05D007622 ORTHO05D009409 1.7e-42 176.0 115 75.7
PGSC0003DMG400012602 Solanum tuberosum HOM05D007622 ORTHO05D009409 1.7e-42 176.0 115 75.7
Duzib147G0488 Durio zibethinus HOM05D007622 ORTHO05D009409 2.2e-42 175.6 112 74.1
Potri.001G344700 Populus trichocarpa HOM05D007622 ORTHO05D009409 2.2e-42 175.6 118 75.4
Ciclev10017228m.g Citrus clementina HOM05D007622 ORTHO05D009409 2.9e-42 175.3 119 73.1
MSTRG.15530 Avicennia marina HOM05D007622 ORTHO05D009409 3.7e-42 174.9 98 81.6
CDE02G3805 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 3.7e-42 174.9 115 69.6
Dinv35108 Davidia involucrata HOM05D007622 ORTHO05D009409 4.9e-42 174.5 98 84.7
Sopen02g037920 Solanum pennellii HOM05D007622 ORTHO05D009409 6.4e-42 174.1 115 74.8
MELO3C021583.2 Cucumis melo HOM05D007622 ORTHO05D009409 8.3e-42 173.7 101 82.2
CsaV3_5G027110 Cucumis sativus L. HOM05D007622 ORTHO05D009409 8.3e-42 173.7 101 82.2
GSVIVG01032401001 Vitis vinifera HOM05D007622 ORTHO05D009409 8.3e-42 173.7 112 74.1
Gohir.D07G230100 Gossypium hirsutum HOM05D007622 ORTHO05D009409 1.4e-41 172.9 114 71.9
Gorai.001G265400 Gossypium raimondii HOM05D007622 ORTHO05D009409 1.4e-41 172.9 114 71.9
Ah.03g137040 Amaranthus hybridus HOM05D007622 ORTHO05D009409 1.9e-41 172.6 97 82.5
Gohir.A07G223400 Gossypium hirsutum HOM05D007622 ORTHO05D009409 1.9e-41 172.6 114 71.1
QL02p074426 Quercus lobata HOM05D007622 ORTHO05D009409 2.4e-41 172.2 99 81.8
CAN.G473.12 Capsicum annuum HOM05D007622 ORTHO05D009409 3.2e-41 171.8 115 73.0
HanXRQChr09g0255201 Helianthus annuus HOM05D007622 ORTHO05D009409 3.2e-41 171.8 111 73.0
CDE09G0341 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 4.1e-41 171.4 115 68.7
PSO111G0004 Papaver somniferum HOM05D007622 ORTHO05D009409 4.1e-41 171.4 98 79.6
Sc03g0007350 Simmondsia chinensis HOM05D007622 ORTHO05D009409 5.4e-41 171.0 98 80.6
Sabra16G0223800 Salix brachista HOM05D007622 ORTHO05D009409 9.2e-41 170.2 118 72.9
TWI36G0684 Tripterygium wilfordii HOM05D007622 ORTHO05D009409 9.2e-41 170.2 118 71.2
SGA_v2.0_scaffold195G40817 Striga asiatica HOM05D007622 ORTHO05D009409 2.7e-40 168.7 98 80.6
ClCG09G019280 Citrullus lanatus HOM05D007622 ORTHO05D009409 4.6e-40 167.9 98 82.7
CANSAT64G0926 Cannabis sativa HOM05D007622 ORTHO05D009409 6.0e-40 167.5 100 81.0
ECA232G2324 Erigeron canadensis HOM05D007622 ORTHO05D009409 6.0e-40 167.5 112 68.8
Prupe.3G292200 Prunus persica HOM05D007622 ORTHO05D009409 1.0e-39 166.8 98 80.6
CiPaw.04G028800 Carya illinoinensis HOM05D007622 ORTHO05D009409 1.3e-39 166.4 98 79.6
Eucgr.J02247 Eucalyptus grandis HOM05D007622 ORTHO05D009409 1.3e-39 166.4 98 77.6
Glyma.19G060600 Glycine max HOM05D007622 ORTHO05D009409 1.3e-39 166.4 110 72.7
Thecc.04G017800 Theobroma cacao HOM05D007622 ORTHO05D009409 1.3e-39 166.4 112 71.4
DCAR_001440 Daucus carota HOM05D007622 ORTHO05D009409 1.7e-39 166.0 112 71.4
Lsat_1_v5_gn_4_184040 Lactuca sativa HOM05D007622 ORTHO05D009409 2.3e-39 165.6 98 76.5
Phvul.008G153900 Phaseolus vulgaris HOM05D007622 ORTHO05D009409 2.3e-39 165.6 100 76.0
Aqoxy5G03768 Aquilegia oxysepala HOM05D007622 ORTHO05D009409 3.0e-39 165.2 112 73.2
Glyma.16G070800 Glycine max HOM05D007622 ORTHO05D009409 3.0e-39 165.2 100 76.0
Nn4g22626 Nelumbo nucifera HOM05D007622 ORTHO05D009409 3.0e-39 165.2 98 79.6
PSO067G0063 Papaver somniferum HOM05D007622 ORTHO05D009409 3.0e-39 165.2 118 66.9
Lalb_Chr24g0402871 Lupinus albus HOM05D007622 ORTHO05D009409 3.9e-39 164.9 99 77.8
Carub.0007s3502 Capsella rubella HOM05D007622 ORTHO05D009409 5.1e-39 164.5 118 62.7
Sed0017852 Sechium edule HOM05D007622 ORTHO05D009409 5.1e-39 164.5 98 81.6
arahy.Tifrunner.gnm1.ann1.QKG8XN Arachis hypogaea HOM05D007622 ORTHO05D009409 8.6e-39 163.7 101 74.3
SalBow1G5210 Salvia bowleyana HOM05D007622 ORTHO05D009409 8.6e-39 163.7 111 69.4
TAR629G2574 Trochodendron aralioides HOM05D007622 ORTHO05D009409 8.6e-39 163.7 98 80.6
AL7G49320 Arabidopsis lyrata HOM05D007622 ORTHO05D009409 1.1e-38 163.3 118 63.6
AT5G40500 Arabidopsis thaliana HOM05D007622 ORTHO05D009409 1.1e-38 163.3 125 62.4
Manes.15G151000 Manihot esculenta HOM05D007622 ORTHO05D009409 1.1e-38 163.3 97 80.4
Hund12976 Selenicereus undatus HOM05D007622 ORTHO05D009409 1.5e-38 162.9 98 74.5
Sp7g01380 Schrenkiella parvula HOM05D007622 ORTHO05D009409 1.9e-38 162.5 118 63.6
BcaB06g27524 Brassica carinata HOM05D007622 ORTHO05D009409 4.3e-38 161.4 118 62.7
A04p13550 Brassica napus HOM05D000285 ORTHO05D009409 4.3e-38 161.4 118 62.7
FvH4_6g51480 Fragaria vesca HOM05D007622 ORTHO05D009409 4.3e-38 161.4 98 76.5
FAN02G2753 Fragaria x ananassa HOM05D007622 ORTHO05D009409 4.3e-38 161.4 98 76.5
FAN09G4241 Fragaria x ananassa HOM05D007622 ORTHO05D009409 4.3e-38 161.4 98 76.5
FAN14G0072 Fragaria x ananassa HOM05D007622 ORTHO05D009409 4.3e-38 161.4 98 76.5
EL10Ac6g14084 Beta vulgaris HOM05D007622 ORTHO05D009409 5.6e-38 161.0 113 66.4
THA.LOC104805368 Tarenaya hassleriana HOM05D007622 ORTHO05D009409 5.6e-38 161.0 120 63.3
C04p47330 Brassica napus HOM05D000285 ORTHO05D009409 7.3e-38 160.6 118 62.7
BolC4t26334H Brassica oleracea HOM05D000285 ORTHO05D009409 7.3e-38 160.6 118 62.7
BraA04t17014Z Brassica rapa HOM05D000285 ORTHO05D009409 7.3e-38 160.6 118 62.7
Duzib264G0071 Durio zibethinus HOM05D007622 ORTHO05D009409 9.5e-38 160.2 98 77.6
MD17G1026500 Malus domestica HOM05D007622 ORTHO05D009409 1.6e-37 159.5 98 74.5
RcHm_v2.0_Chr2g0173121 Rosa chinensis HOM05D007622 ORTHO05D009409 1.6e-37 159.5 98 74.5
Migut.H00074 Erythranthe guttata HOM05D007622 ORTHO05D009409 2.1e-37 159.1 118 64.4
Medtr7g033680 Medicago truncatula HOM05D007622 ORTHO05D009409 2.1e-37 159.1 102 73.5
Zm00001eb425130 Zea mays HOM05D007622 ORTHO05D009409 2.1e-37 159.1 105 70.5
FAN05G3531 Fragaria x ananassa HOM05D007622 ORTHO05D009409 2.8e-37 158.7 98 75.5
Thhalv10027995m.g Eutrema salsugineum HOM05D007622 ORTHO05D009409 8.1e-37 157.1 118 61.9
Atru.chr6.2402 Acer truncatum HOM05D007622 ORTHO05D009409 8.9e-36 153.7 119 65.5
Os04g0482900 Oryza sativa ssp. japonica HOM05D007622 ORTHO05D009409 2.0e-35 152.5 109 66.1
Lj1g0022477 Lotus japonicus HOM05D007622 ORTHO05D009409 1.3e-34 149.8 82 81.7
TPR.G1098 Trifolium pratense HOM05D007622 ORTHO05D009409 2.9e-34 148.7 89 78.7
arahy.Tifrunner.gnm1.ann1.30MLP8 Arachis hypogaea HOM05D007622 ORTHO05D009409 3.8e-34 148.3 111 64.0
SEGI_15693 Sequoiadendron giganteum HOM05D007622 ORTHO05D009409 2.1e-32 142.5 98 69.4
AagrBONN_evm.TU.Sc2ySwM_117.2472 Anthoceros agrestis HOM05D007622 ORTHO05D009409 2.8e-29 132.1 96 62.5
vmacro18290 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 1.5e-27 126.3 80 77.5
Pp3c12_19400 Physcomitrium patens HOM05D007622 ORTHO05D009409 7.6e-27 124.0 100 58.0
Rhsim08G0048800 Rhododendron simsii HOM05D007622 ORTHO05D009409 1.3e-26 123.2 94 69.1
Aa31LG9G1100 Aethionema arabicum HOM05D001812 ORTHO05D001874 3.8e-26 121.7 100 59.0
SMO367G1081 Selaginella moellendorffii HOM05D007622 ORTHO05D009409 1.4e-25 119.8 92 56.5
TAR371G1070 Trochodendron aralioides HOM05D007622 ORTHO05D009409 3.5e-24 115.2 92 59.8
CBR_g34193 Chara braunii HOM05D007622 ORTHO05D009409 5.6e-22 107.8 84 56.0
Psat3g166480 Pisum sativum HOM05D007622 ORTHO05D009409 1.6e-21 106.3 64 78.1
MD09G1025400 Malus domestica HOM05D007622 ORTHO05D009409 4.0e-20 101.7 60 76.7
Cre12.g498700 Chlamydomonas reinhardtii HOM05D007622 ORTHO05D009409 1.3e-15 86.7 77 49.4
PRCOL_00004665 Prasinoderma coloniale HOM05D007622 ORTHO05D009409 4.0e-12 75.1 93 35.5
vmacro18289 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 3.0e-07 58.9 36 69.4
VMungo1383G1925 Vigna mungo HOM05D007622 ORTHO05D009409 4.3e-06 55.1 39 59.0


User provided reference genes

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