Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc07_g00480 Coffea canephora HOM05D005499 ORTHO05D006666 5.2e-64 247.7 134 100.0
Cc10_g08070 Coffea canephora HOM05D005499 ORTHO05D006666 5.2e-48 194.5 134 74.6
Dinv33378 Davidia involucrata HOM05D005499 ORTHO05D006666 5.0e-43 177.9 134 69.4
Eucgr.J02294 Eucalyptus grandis HOM05D005499 ORTHO05D006666 9.5e-42 173.7 134 66.4
Nitab4.5_0012484g0010 Nicotiana tabacum HOM05D005499 ORTHO05D006666 2.1e-41 172.6 134 67.2
Cpa.g.sc130.24 Carica papaya HOM05D005499 ORTHO05D006666 2.8e-41 172.2 134 67.9
Hma1.2p1_0279F.1_g112320 Hydrangea macrophylla HOM05D005499 ORTHO05D006666 6.1e-41 171.0 134 67.9
TWI36G0940 Tripterygium wilfordii HOM05D005499 ORTHO05D006666 2.3e-40 169.1 134 67.9
Nitab4.5_0000743g0030 Nicotiana tabacum HOM05D005499 ORTHO05D006666 6.8e-40 167.5 134 65.7
Thecc.04G028500 Theobroma cacao HOM05D005499 ORTHO05D006666 8.9e-40 167.2 134 67.2
CiPaw.03G051000 Carya illinoinensis HOM05D005499 ORTHO05D006666 2.6e-39 165.6 134 66.4
DCAR_011296 Daucus carota HOM05D005499 ORTHO05D006666 2.6e-39 165.6 134 64.2
CSS0020557 Camellia sinensis var. sinensis HOM05D005499 ORTHO05D006666 3.4e-39 165.2 134 64.9
Oeu003270.1 Olea europaea HOM05D005499 ORTHO05D006666 3.4e-39 165.2 134 65.7
Rhsim10G0010400 Rhododendron simsii HOM05D005499 ORTHO05D006666 5.7e-39 164.5 134 64.2
SalBow7G4317 Salvia bowleyana HOM05D005499 ORTHO05D006666 5.7e-39 164.5 128 66.4
Duzib264G0656 Durio zibethinus HOM05D005499 ORTHO05D006666 7.5e-39 164.1 134 67.2
Gorai.012G089400 Gossypium raimondii HOM05D005499 ORTHO05D006666 7.5e-39 164.1 134 68.7
Nn4g24319 Nelumbo nucifera HOM05D005499 ORTHO05D006666 7.5e-39 164.1 134 65.7
Duzib187G1007 Durio zibethinus HOM05D005499 ORTHO05D006666 9.8e-39 163.7 134 67.9
Peaxi162Scf00016g00048 Petunia axillaris HOM05D005499 ORTHO05D006666 9.8e-39 163.7 128 64.8
COL.COLO4_29287 Corchorus olitorius HOM05D005499 ORTHO05D006666 1.3e-38 163.3 134 67.9
Lj6g0007933 Lotus japonicus HOM05D005499 ORTHO05D006666 1.3e-38 163.3 134 64.9
Lalb_Chr02g0157891 Lupinus albus HOM05D005499 ORTHO05D006666 1.3e-38 163.3 134 64.9
Lalb_Chr21g0317581 Lupinus albus HOM05D005499 ORTHO05D006666 1.3e-38 163.3 134 64.9
TAR371G0544 Trochodendron aralioides HOM05D005499 ORTHO05D006666 3.7e-38 161.8 134 64.2
PSO478G5160 Papaver somniferum HOM05D005499 ORTHO05D006666 4.9e-38 161.4 134 64.2
PGSC0003DMG400016154 Solanum tuberosum HOM05D005499 ORTHO05D006666 4.9e-38 161.4 134 62.7
TWI56G1275 Tripterygium wilfordii HOM05D005499 ORTHO05D006666 4.9e-38 161.4 128 68.0
Solyc11g010180.2 Solanum lycopersicum HOM05D005499 ORTHO05D006666 6.4e-38 161.0 134 62.7
Sopen11g004960 Solanum pennellii HOM05D005499 ORTHO05D006666 6.4e-38 161.0 134 62.7
Atru.chr6.2492 Acer truncatum HOM05D005499 ORTHO05D006666 8.3e-38 160.6 134 63.4
Prupe.6G125800 Prunus persica HOM05D005499 ORTHO05D006666 1.1e-37 160.2 134 62.7
QL02p072772 Quercus lobata HOM05D005499 ORTHO05D006666 1.1e-37 160.2 133 62.4
MBI11_g21381_MAGBIO Magnolia biondii HOM05D005499 ORTHO05D006666 2.4e-37 159.1 134 62.7
Potri.001G335600 Populus trichocarpa HOM05D005499 ORTHO05D006666 4.1e-37 158.3 134 65.7
Haze_14820 Corylus avellana HOM05D005499 ORTHO05D006666 5.4e-37 157.9 134 62.7
Gohir.D04G079400 Gossypium hirsutum HOM05D005499 ORTHO05D006666 7.0e-37 157.5 134 66.4
PSO782G3924 Papaver somniferum HOM05D005499 ORTHO05D006666 7.0e-37 157.5 134 61.9
Manes.15G156800 Manihot esculenta HOM05D005499 ORTHO05D006666 9.2e-37 157.1 134 63.4
RcHm_v2.0_Chr3g0449841 Rosa chinensis HOM05D005499 ORTHO05D006666 9.2e-37 157.1 134 65.7
Migut.K01440 Erythranthe guttata HOM05D005499 ORTHO05D006666 1.2e-36 156.8 128 66.4
TAR629G1334 Trochodendron aralioides HOM05D005499 ORTHO05D006666 1.6e-36 156.4 134 63.4
arahy.Tifrunner.gnm1.ann1.JB8R4I Arachis hypogaea HOM05D005499 ORTHO05D006666 2.0e-36 156.0 134 64.2
Ciclev10017154m.g Citrus clementina HOM05D005499 ORTHO05D006666 2.0e-36 156.0 134 62.7
ECA238G0236 Erigeron canadensis HOM05D005499 ORTHO05D006666 2.0e-36 156.0 114 71.9
arahy.Tifrunner.gnm1.ann1.C4BPDT Arachis hypogaea HOM05D005499 ORTHO05D006666 2.7e-36 155.6 134 63.4
FAN05G0237 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.7e-36 155.6 128 66.4
FAN05G2282 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.7e-36 155.6 128 66.4
FAN05G1403 Fragaria x ananassa HOM05D005499 ORTHO05D006666 3.5e-36 155.2 128 66.4
FAN09G0379 Fragaria x ananassa HOM05D005499 ORTHO05D006666 3.5e-36 155.2 128 66.4
FAN14G4216 Fragaria x ananassa HOM05D005499 ORTHO05D006666 3.5e-36 155.2 128 66.4
Cfa007270 Carpinus fangiana HOM05D005499 ORTHO05D006666 4.6e-36 154.8 134 62.7
FvH4_6g02050 Fragaria vesca HOM05D005499 ORTHO05D006666 4.6e-36 154.8 128 66.4
HanXRQChr01g0030421 Helianthus annuus HOM05D005499 ORTHO05D006666 4.6e-36 154.8 134 62.7
Sabra16G0216600 Salix brachista HOM05D005499 ORTHO05D006666 4.6e-36 154.8 134 64.9
PGSC0003DMG400023637 Solanum tuberosum HOM05D005499 ORTHO05D006666 4.6e-36 154.8 134 61.2
VMungo0464G1619 Vigna mungo HOM05D005499 ORTHO05D006666 4.6e-36 154.8 134 61.9
FAN05G4095 Fragaria x ananassa HOM05D005499 ORTHO05D006666 7.8e-36 154.1 128 65.6
Lsat_1_v5_gn_3_10761 Lactuca sativa HOM05D005499 ORTHO05D006666 1.0e-35 153.7 138 60.1
Sc10g0004570 Simmondsia chinensis HOM05D005499 ORTHO05D006666 1.0e-35 153.7 134 61.2
TPR.G3708 Trifolium pratense HOM05D005499 ORTHO05D006666 1.0e-35 153.7 134 61.2
Gohir.D10G084868 Gossypium hirsutum HOM05D005499 ORTHO05D006666 1.3e-35 153.3 125 68.0
Psat1g031800 Pisum sativum HOM05D005499 ORTHO05D006666 1.3e-35 153.3 134 61.2
AUR62036750 Chenopodium quinoa HOM05D005499 ORTHO05D006666 1.7e-35 152.9 134 61.9
Glyma.05G073700 Glycine max HOM05D005499 ORTHO05D006666 1.7e-35 152.9 134 61.9
Glyma.19G077100 Glycine max HOM05D005499 ORTHO05D006666 1.7e-35 152.9 134 62.7
FvH4_4g13440 Fragaria vesca HOM05D005499 ORTHO05D006666 2.3e-35 152.5 138 64.5
FAN12G0501 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.3e-35 152.5 138 64.5
Gohir.A10G160300 Gossypium hirsutum HOM05D005499 ORTHO05D006666 2.3e-35 152.5 108 75.0
Medtr6g078300 Medicago truncatula HOM05D005499 ORTHO05D006666 2.3e-35 152.5 135 60.0
CAN.G905.22 Capsicum annuum HOM05D005499 ORTHO05D006666 2.9e-35 152.1 137 60.6
Gorai.011G092800 Gossypium raimondii HOM05D005499 ORTHO05D006666 2.9e-35 152.1 125 67.2
FAN14G1883 Fragaria x ananassa HOM05D005499 ORTHO05D006666 3.9e-35 151.8 138 63.8
FAN14G2627 Fragaria x ananassa HOM05D005499 ORTHO05D006666 3.9e-35 151.8 138 63.8
SGA_v2.0_scaffold47G17558 Striga asiatica HOM05D005499 ORTHO05D006666 5.0e-35 151.4 134 62.7
THA.LOC104822403 Tarenaya hassleriana HOM05D005499 ORTHO05D006666 1.1e-34 150.2 131 67.9
AUR62013851 Chenopodium quinoa HOM05D005499 ORTHO05D006666 1.9e-34 149.4 134 60.4
Phvul.003G262000 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 1.9e-34 149.4 134 60.4
CANSAT11G2604 Cannabis sativa HOM05D005499 ORTHO05D006666 2.5e-34 149.1 134 61.2
Ca_25364_v3 Cicer arietinum L. HOM05D005499 ORTHO05D006666 2.5e-34 149.1 135 60.7
Phvul.003G138900 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 3.3e-34 148.7 134 61.9
Phvul.003G139152 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 3.3e-34 148.7 134 61.9
unitig_32.g10669 Utricularia gibba HOM05D005499 ORTHO05D006666 3.3e-34 148.7 134 61.2
Actinidia05936 Actinidia chinensis HOM05D005499 ORTHO05D006666 4.3e-34 148.3 134 62.7
Aqoxy5G03538 Aquilegia oxysepala HOM05D005499 ORTHO05D006666 7.3e-34 147.5 134 59.0
MSTRG.3267 Avicennia marina HOM05D005499 ORTHO05D006666 7.3e-34 147.5 119 67.2
Ah.00g000560 Amaranthus hybridus HOM05D005499 ORTHO05D006666 9.5e-34 147.1 134 60.4
Carub.0003s0032 Capsella rubella HOM05D005499 ORTHO05D006666 9.5e-34 147.1 122 66.4
Nitab4.5_0003764g0020 Nicotiana tabacum HOM05D005499 ORTHO05D006666 9.5e-34 147.1 134 59.0
QL05p048106 Quercus lobata HOM05D005499 ORTHO05D006666 1.2e-33 146.7 107 70.1
AL3G10400 Arabidopsis lyrata HOM05D005499 ORTHO05D006666 2.8e-33 145.6 110 67.3
Gohir.A05G341200 Gossypium hirsutum HOM05D005499 ORTHO05D006666 6.2e-33 144.4 134 61.9
Hund13392 Selenicereus undatus HOM05D005499 ORTHO05D006666 8.0e-33 144.1 92 80.4
AT3G01740 Arabidopsis thaliana HOM05D005499 ORTHO05D006666 1.4e-32 143.3 110 72.7
CARHR199040 Cardamine hirsuta HOM05D005499 ORTHO05D006666 1.8e-32 142.9 119 65.5
Aqoxy3G01444 Aquilegia oxysepala HOM05D005499 ORTHO05D006666 3.1e-32 142.1 130 62.3
CARHR075180 Cardamine hirsuta HOM05D005499 ORTHO05D006666 3.1e-32 142.1 92 77.2
ATR1098G108 Amborella trichopoda HOM05D005499 ORTHO05D006666 4.0e-32 141.7 117 68.4
PSO782G2325 Papaver somniferum HOM05D005499 ORTHO05D006666 5.2e-32 141.4 121 62.8
ClCG04G001400 Citrullus lanatus HOM05D005499 ORTHO05D006666 1.2e-31 140.2 119 63.9
HPP92_006243 Vanilla planifolia HOM05D005499 ORTHO05D006666 2.0e-31 139.4 128 59.4
Aa31LG5G10870 Aethionema arabicum HOM05D005499 ORTHO05D006666 3.4e-31 138.7 119 63.9
Medtr4g073700 Medicago truncatula HOM05D005499 ORTHO05D006666 3.4e-31 138.7 134 56.7
EL10Ac2g02820 Beta vulgaris HOM05D005499 ORTHO05D006666 5.8e-31 137.9 134 58.2
Psat7g172960 Pisum sativum HOM05D005499 ORTHO05D006666 5.8e-31 137.9 134 57.5
Os12g0244200 Oryza sativa ssp. japonica HOM05D005499 ORTHO05D006666 9.8e-31 137.1 133 59.4
MELO3C008981.2 Cucumis melo HOM05D005499 ORTHO05D006666 1.3e-30 136.7 117 62.4
Sp3g00320 Schrenkiella parvula HOM05D005499 ORTHO05D006666 1.7e-30 136.3 92 73.9
A03p32370 Brassica napus HOM05D005499 ORTHO05D006666 2.9e-30 135.6 110 65.5
C03p39430 Brassica napus HOM05D005499 ORTHO05D006666 2.9e-30 135.6 110 65.5
BolC3t16211H Brassica oleracea HOM05D005499 ORTHO05D006666 2.9e-30 135.6 110 65.5
BraA03t12407Z Brassica rapa HOM05D005499 ORTHO05D006666 2.9e-30 135.6 110 65.5
Sed0019428 Sechium edule HOM05D005499 ORTHO05D006666 4.9e-30 134.8 119 59.7
Thhalv10014999m.g Eutrema salsugineum HOM05D005499 ORTHO05D006666 1.4e-29 133.3 119 62.2
CsaV3_4G031040 Cucumis sativus L. HOM05D005499 ORTHO05D006666 1.9e-29 132.9 117 61.5
Thhalv10021760m.g Eutrema salsugineum HOM05D005499 ORTHO05D006666 1.9e-29 132.9 92 71.7
CARHR105740 Cardamine hirsuta HOM05D005499 ORTHO05D006666 2.4e-29 132.5 92 71.7
AT5G14290 Arabidopsis thaliana HOM05D005499 ORTHO05D006666 2.0e-28 129.4 110 60.9
AL6G24990 Arabidopsis lyrata HOM05D005499 ORTHO05D006666 1.0e-27 127.1 93 69.9
Zm00001eb328460 Zea mays HOM05D005499 ORTHO05D006666 3.3e-26 122.1 93 66.7
Sed0018883 Sechium edule HOM05D005499 ORTHO05D006666 5.6e-26 121.3 90 67.8
SHI11403 Sapria himalayana HOM05D005499 ORTHO05D006666 6.2e-25 117.9 110 54.5
FAN21G0236 Fragaria x ananassa HOM05D005499 ORTHO05D006666 8.1e-25 117.5 126 54.8
SEGI_30393 Sequoiadendron giganteum HOM05D005499 ORTHO05D006666 1.3e-22 110.2 88 61.4
Nn1g08773 Nelumbo nucifera HOM05D005499 ORTHO05D006666 3.2e-21 105.5 120 52.5
FAN02G3728 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.1e-18 97.1 57 82.5
Mapoly0005s0032 Marchantia polymorpha HOM05D005499 ORTHO05D006666 2.5e-18 95.9 91 51.6
Pp3c26_11040 Physcomitrium patens HOM05D005499 ORTHO05D006666 5.6e-18 94.7 92 51.1
CBR_g38683 Chara braunii HOM05D005499 ORTHO05D006666 2.8e-17 92.4 113 46.0
Gohir.1Z049635 Gossypium hirsutum HOM05D005499 ORTHO05D006666 4.7e-17 91.7 84 59.5
AagrBONN_evm.TU.Sc2ySwM_362.2497 Anthoceros agrestis HOM05D005499 ORTHO05D006666 6.2e-17 91.3 91 50.5
SMO164G0004 Selaginella moellendorffii HOM05D005499 ORTHO05D006666 4.9e-14 81.6 93 45.2
CARHR266370 Cardamine hirsuta HOM05D005499 ORTHO05D006666 2.1e-12 76.3 51 70.6
Dinv24762 Davidia involucrata HOM05D003270 ORTHO05D003662 1.9e-10 69.7 103 40.8
TAR374G0914 Trochodendron aralioides HOM05D005499 ORTHO05D006666 2.5e-10 69.3 88 48.9
Cre12.g546000 Chlamydomonas reinhardtii HOM05D005499 ORTHO05D006666 2.4e-08 62.8 81 42.0
MCO16G647 Micromonas commoda HOM05D005499 ORTHO05D006666 1.7e-06 56.6 131 32.1


User provided reference genes

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