Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc07_g00130 Coffea canephora HOM05D007617 ORTHO05D007195 1.0e-87 326.6 159 100.0
Solyc02g067910.1 Solanum lycopersicum HOM05D007617 ORTHO05D007195 5.8e-14 81.6 142 46.5
Sopen02g017030 Solanum pennellii HOM05D007617 ORTHO05D007195 6.4e-13 78.2 122 46.7
DCAR_011273 Daucus carota HOM05D007617 ORTHO05D007195 1.1e-12 77.4 156 42.9
PGSC0003DMG400012616 Solanum tuberosum HOM05D007617 ORTHO05D007195 1.4e-12 77.0 159 45.3
QL02p073546 Quercus lobata HOM05D007617 ORTHO05D007195 9.3e-12 74.3 155 42.6
Aqoxy5G03650 Aquilegia oxysepala HOM05D007617 ORTHO05D007195 1.2e-11 73.9 136 41.9
Hma1.2p1_0818F.1_g223400 Hydrangea macrophylla HOM05D007617 ORTHO05D007195 1.6e-11 73.6 78 57.7
vmacro18302 Vaccinium macrocarpon HOM05D007617 ORTHO05D007195 1.6e-11 73.6 132 43.9
CAN.G1057.14 Capsicum annuum HOM05D007617 ORTHO05D007195 2.7e-11 72.8 73 61.6
Nitab4.5_0000040g0620 Nicotiana tabacum HOM05D007617 ORTHO05D007195 4.6e-11 72.0 71 63.4
Oeu023836.1 Olea europaea HOM05D007617 ORTHO05D007195 7.9e-11 71.2 181 40.9
Nitab4.5_0004496g0030 Nicotiana tabacum HOM05D007617 ORTHO05D007195 1.3e-10 70.5 70 60.0
Prupe.3G296000 Prunus persica HOM05D007617 ORTHO05D007195 1.7e-10 70.1 92 55.4
Sopen02g038090 Solanum pennellii HOM05D007617 ORTHO05D007195 3.9e-10 68.9 158 44.3
Ciclev10017789m.g Citrus clementina HOM05D007617 ORTHO05D007195 1.9e-09 66.6 156 39.7
Oeu054643.1 Olea europaea HOM05D007617 ORTHO05D007195 2.5e-09 66.2 76 55.3
Nitab4.5_0014774g0010 Nicotiana tabacum HOM05D007617 ORTHO05D007195 3.3e-09 65.9 72 61.1
Ciclev10022896m.g Citrus clementina HOM05D007617 ORTHO05D007195 4.3e-09 65.5 104 44.2
Lalb_Chr02g0158101 Lupinus albus HOM05D007617 ORTHO05D007195 4.3e-09 65.5 73 57.5
PGSC0003DMG400006919 Solanum tuberosum HOM05D007617 ORTHO05D007195 9.6e-09 64.3 121 42.1
Lsat_1_v5_gn_2_91001 Lactuca sativa HOM05D007617 ORTHO05D007195 1.6e-08 63.5 82 54.9
Potri.012G090700 Populus trichocarpa HOM05D007617 ORTHO05D007195 1.6e-08 63.5 146 41.8
Lsat_1_v5_gn_2_94241 Lactuca sativa HOM05D007617 ORTHO05D007195 2.1e-08 63.2 82 54.9
Oeu050454.1 Olea europaea HOM05D007617 ORTHO05D007195 2.1e-08 63.2 157 38.9
MD06G1161600 Malus domestica HOM05D007617 ORTHO05D007195 2.8e-08 62.8 76 56.6
Medtr1g093790 Medicago truncatula HOM05D007617 ORTHO05D007195 3.6e-08 62.4 79 51.9
Psat6g179560 Pisum sativum HOM05D007617 ORTHO05D007195 4.8e-08 62.0 142 40.8
TPR.G31739 Trifolium pratense HOM05D007617 ORTHO05D007195 8.1e-08 61.2 68 55.9
CANSAT64G0294 Cannabis sativa HOM05D007617 ORTHO05D007195 1.1e-07 60.8 73 60.3
Sed0018064 Sechium edule HOM05D007617 ORTHO05D007195 1.8e-07 60.1 136 41.2
MSTRG.15542 Avicennia marina HOM05D007617 ORTHO05D007195 3.1e-07 59.3 157 38.2
FAN13G2538 Fragaria x ananassa HOM05D007617 ORTHO05D007195 3.1e-07 59.3 68 60.3
Lalb_Chr21g0317701 Lupinus albus HOM05D007617 ORTHO05D007195 3.1e-07 59.3 137 39.4
Manes.14G057300 Manihot esculenta HOM05D007617 ORTHO05D007195 3.1e-07 59.3 148 39.9
Atru.chr6.2453 Acer truncatum HOM05D007617 ORTHO05D007195 5.3e-07 58.5 70 55.7
FvH4_5g06710 Fragaria vesca HOM05D007617 ORTHO05D007195 5.3e-07 58.5 68 60.3
FAN08G2040 Fragaria x ananassa HOM05D007617 ORTHO05D007195 5.3e-07 58.5 68 60.3
FAN18G3066 Fragaria x ananassa HOM05D007617 ORTHO05D007195 5.3e-07 58.5 68 60.3
Glyma.05G114700 Glycine max HOM05D007617 ORTHO05D007195 5.3e-07 58.5 136 40.4
Lj2g0010313 Lotus japonicus HOM05D007617 ORTHO05D007195 5.3e-07 58.5 127 44.1
ATR1145G009 Amborella trichopoda HOM05D007617 ORTHO05D007195 6.9e-07 58.2 114 43.9
RcHm_v2.0_Chr7g0191931 Rosa chinensis HOM05D007617 ORTHO05D007195 6.9e-07 58.2 71 59.2
TAR374G0075 Trochodendron aralioides HOM05D007617 ORTHO05D007195 6.9e-07 58.2 126 42.9
Aa31LG1G18820 Aethionema arabicum HOM05D010525 ORTHO05D007195 1.2e-06 57.4 74 51.4
Migut.K01418 Erythranthe guttata HOM05D007617 ORTHO05D007195 1.2e-06 57.4 159 36.5
PGR142G0897 Punica granatum HOM05D007617 ORTHO05D007195 1.2e-06 57.4 88 48.9
CiPaw.03G047400 Carya illinoinensis HOM05D007617 ORTHO05D007195 1.5e-06 57.0 114 43.9
CiPaw.09G026700 Carya illinoinensis HOM05D007617 ORTHO05D007195 1.5e-06 57.0 114 43.9
Manes.06G112400 Manihot esculenta HOM05D007617 ORTHO05D007195 2.0e-06 56.6 144 37.5
CARHR276990 Cardamine hirsuta HOM05D010525 ORTHO05D007195 2.6e-06 56.2 77 49.4
MSTRG.549 Avicennia marina HOM05D007617 ORTHO05D007195 3.4e-06 55.8 64 57.8
Phvul.004G059700 Phaseolus vulgaris HOM05D007617 ORTHO05D007195 3.4e-06 55.8 121 43.0
Migut.K00629 Erythranthe guttata HOM05D007617 ORTHO05D007195 4.5e-06 55.5 66 53.0
SGA_v2.0_scaffold47G17524 Striga asiatica HOM05D007617 ORTHO05D007195 4.5e-06 55.5 92 50.0
Thecc.03G118700 Theobroma cacao HOM05D011792 ORTHO05D007195 5.8e-06 55.1 127 39.4
MD02G1049300 Malus domestica HOM05D007617 ORTHO05D007195 7.6e-06 54.7 75 50.7
SGA_v2.0_scaffold30G12404 Striga asiatica HOM05D007617 ORTHO05D007195 7.6e-06 54.7 100 47.0
Glyma.19G053100 Glycine max HOM05D007617 ORTHO05D007195 9.9e-06 54.3 135 39.3


User provided reference genes

Program Settings