Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g23870 Coffea canephora HOM05D000905 ORTHO05D000749 3.4e-46 188.0 93 100.0
CiPaw.15G161600 Carya illinoinensis HOM05D000905 ORTHO05D000749 7.3e-17 90.5 60 65.0
GSVIVG01032268001 Vitis vinifera HOM05D000905 ORTHO05D000749 1.6e-16 89.4 59 64.4
QL11p008075 Quercus lobata HOM05D000905 ORTHO05D000749 2.1e-16 89.0 59 62.7
Actinidia38531 Actinidia chinensis HOM05D000905 ORTHO05D000749 2.8e-16 88.6 60 70.0
Dinv12618 Davidia involucrata HOM05D000905 ORTHO05D000749 3.6e-16 88.2 60 66.7
Ciclev10007456m.g Citrus clementina HOM05D000905 ORTHO05D000749 8.9e-15 83.6 60 60.0
DCAR_014584 Daucus carota HOM05D000905 ORTHO05D000749 8.9e-15 83.6 60 58.3
Nn8g41147 Nelumbo nucifera HOM05D000905 ORTHO05D000749 1.5e-14 82.8 60 60.0
Haze_19092 Corylus avellana HOM05D000905 ORTHO05D000749 2.0e-14 82.4 56 62.5
TAR626G0450 Trochodendron aralioides HOM05D000905 ORTHO05D000749 5.8e-14 80.9 60 60.0
Duzib150G0956 Durio zibethinus HOM05D000905 ORTHO05D000749 7.6e-14 80.5 57 57.9
Thecc.09G200900 Theobroma cacao HOM05D000905 ORTHO05D000749 1.7e-13 79.3 57 57.9
Gohir.A08G015700 Gossypium hirsutum HOM05D000905 ORTHO05D000749 2.2e-13 79.0 60 58.3
Gorai.004G022300 Gossypium raimondii HOM05D000905 ORTHO05D000749 2.2e-13 79.0 60 58.3
Potri.006G079500 Populus trichocarpa HOM05D000905 ORTHO05D000749 2.2e-13 79.0 60 51.7
Atru.chr7.1006 Acer truncatum HOM05D000905 ORTHO05D000749 2.9e-13 78.6 58 56.9
Manes.02G223100 Manihot esculenta HOM05D000905 ORTHO05D000749 4.9e-13 77.8 56 58.9
ECA234G3957 Erigeron canadensis HOM05D000905 ORTHO05D000749 4.2e-12 74.7 59 52.5
Atru.chr1.2068 Acer truncatum HOM05D000905 ORTHO05D000749 7.1e-12 73.9 57 56.1
Atru.chr5.2812 Acer truncatum HOM05D000905 ORTHO05D000749 7.1e-12 73.9 57 56.1
Rhsim03G0270200 Rhododendron simsii HOM05D000905 ORTHO05D000749 1.6e-11 72.8 59 54.2
Atru.chr4.493 Acer truncatum HOM05D003898 ORTHO05D004642 2.1e-11 72.4 57 54.4
AUR62027985 Chenopodium quinoa HOM05D000905 ORTHO05D000749 2.7e-11 72.0 56 53.6
EL10Ac2g03625 Beta vulgaris HOM05D000905 ORTHO05D000749 3.5e-11 71.6 56 57.1
CANSAT80G1045 Cannabis sativa HOM05D000905 ORTHO05D000749 3.5e-11 71.6 60 50.0
Prupe.1G063300 Prunus persica HOM05D000905 ORTHO05D000749 3.5e-11 71.6 60 46.7
vmacro22706 Vaccinium macrocarpon HOM05D000905 ORTHO05D000749 4.6e-11 71.2 57 52.6
CSS0049685 Camellia sinensis var. sinensis HOM05D000905 ORTHO05D000749 1.0e-10 70.1 56 55.4
Carub.0013s0002 Capsella rubella HOM05D000905 ORTHO05D000749 1.3e-10 69.7 60 50.0
Peaxi162Scf00474g00525 Petunia axillaris HOM05D000905 ORTHO05D000749 1.3e-10 69.7 57 52.6
PGR044G0190 Punica granatum HOM05D000905 ORTHO05D000749 1.3e-10 69.7 60 46.7
FvH4_4g05970 Fragaria vesca HOM05D000905 ORTHO05D000749 1.7e-10 69.3 56 50.0
PSO063G0310 Papaver somniferum HOM05D000905 ORTHO05D000749 1.7e-10 69.3 59 50.8
PSO170G0491 Papaver somniferum HOM05D000905 ORTHO05D000749 1.7e-10 69.3 59 50.8
Aqoxy7G02654 Aquilegia oxysepala HOM05D000905 ORTHO05D000749 2.3e-10 68.9 56 50.0
CsaV3_1G044050 Cucumis sativus L. HOM05D000905 ORTHO05D000749 2.3e-10 68.9 60 51.7
Sed0005399 Sechium edule HOM05D000905 ORTHO05D000749 2.3e-10 68.9 60 50.0
AL3G44100 Arabidopsis lyrata HOM05D000905 ORTHO05D000749 3.9e-10 68.2 60 48.3
AT2G07170 Arabidopsis thaliana HOM05D000905 ORTHO05D000749 3.9e-10 68.2 60 48.3
Thhalv10024428m.g Eutrema salsugineum HOM05D000905 ORTHO05D000749 3.9e-10 68.2 60 48.3
Ah.10g032720 Amaranthus hybridus HOM05D000905 ORTHO05D000749 5.1e-10 67.8 56 50.0
FAN12G0461 Fragaria x ananassa HOM05D000905 ORTHO05D000749 5.1e-10 67.8 62 46.8
AUR62020728 Chenopodium quinoa HOM05D000905 ORTHO05D000749 6.6e-10 67.4 56 51.8
FAN17G0320 Fragaria x ananassa HOM05D000905 ORTHO05D000749 6.6e-10 67.4 62 45.2
Oeu000962.1 Olea europaea HOM05D000905 ORTHO05D000749 6.6e-10 67.4 56 50.0
Sc23g0004380 Simmondsia chinensis HOM05D000905 ORTHO05D000749 6.6e-10 67.4 57 52.6
THA.LOC104815308 Tarenaya hassleriana HOM05D000905 ORTHO05D000749 6.6e-10 67.4 57 54.4
Lsat_1_v5_gn_7_57441 Lactuca sativa HOM05D000905 ORTHO05D000749 8.7e-10 67.0 60 41.7
SalBow6G6089 Salvia bowleyana HOM05D000905 ORTHO05D000749 8.7e-10 67.0 56 51.8
FAN07G0268 Fragaria x ananassa HOM05D000905 ORTHO05D000749 1.5e-09 66.2 62 46.8
Migut.J00844 Erythranthe guttata HOM05D000905 ORTHO05D000749 2.5e-09 65.5 59 49.2
HanXRQChr12g0358601 Helianthus annuus HOM05D000905 ORTHO05D000749 2.5e-09 65.5 56 50.0
RcHm_v2.0_Chr4g0397171 Rosa chinensis HOM05D000905 ORTHO05D000749 2.5e-09 65.5 56 48.2
BcaC09g51628 Brassica carinata HOM05D000905 ORTHO05D000749 3.3e-09 65.1 60 48.3
MBI13_g33567_MAGBIO Magnolia biondii HOM05D000905 ORTHO05D000749 3.3e-09 65.1 57 49.1
MD13G1232000 Malus domestica HOM05D000905 ORTHO05D000749 3.3e-09 65.1 56 44.6
CARHR104000 Cardamine hirsuta HOM05D000905 ORTHO05D000749 4.3e-09 64.7 60 45.0
Sopen07g022270 Solanum pennellii HOM05D000905 ORTHO05D000749 4.3e-09 64.7 57 45.6
Lj2g0025756 Lotus japonicus HOM05D000905 ORTHO05D000749 7.3e-09 63.9 57 47.4
Sp7g16580 Schrenkiella parvula HOM05D000905 ORTHO05D000749 7.3e-09 63.9 60 46.7
MSTRG.19400 Avicennia marina HOM05D000905 ORTHO05D000749 9.6e-09 63.5 59 45.8
Aa31sc130G70 Aethionema arabicum HOM05D000905 ORTHO05D000749 1.3e-08 63.2 62 41.9
TWI34G1969 Tripterygium wilfordii HOM05D000905 ORTHO05D000749 4.8e-08 61.2 60 41.7
Glyma.01G001200 Glycine max HOM05D000905 ORTHO05D000749 6.2e-08 60.8 57 47.4
BcaNung00077 Brassica carinata HOM05D000905 ORTHO05D000749 8.1e-08 60.5 60 46.7
Solyc07g042580.3 Solanum lycopersicum HOM05D000905 ORTHO05D000749 1.1e-07 60.1 57 43.9
BolC1t01092H Brassica oleracea HOM05D000905 ORTHO05D000749 1.8e-07 59.3 57 45.6
BraA01t00909Z Brassica rapa HOM05D000905 ORTHO05D000749 1.8e-07 59.3 57 45.6
ClCG03G011840 Citrullus lanatus HOM05D000905 ORTHO05D000749 2.4e-07 58.9 57 45.6
MD16G1236800 Malus domestica HOM05D000905 ORTHO05D000749 2.4e-07 58.9 56 41.1
MSTRG.5962 Avicennia marina HOM05D000905 ORTHO05D000749 3.1e-07 58.5 56 44.6
Lj5A802T82 Lonicera japonica HOM05D000905 ORTHO05D000749 5.3e-07 57.8 57 47.4
arahy.Tifrunner.gnm1.ann1.R9TITG Arachis hypogaea HOM05D000905 ORTHO05D000749 9.0e-07 57.0 57 42.1
arahy.Tifrunner.gnm1.ann1.SP0CEZ Arachis hypogaea HOM05D000905 ORTHO05D000749 9.0e-07 57.0 57 42.1
arahy.Tifrunner.gnm1.ann1.TW4R6Z Arachis hypogaea HOM05D000905 ORTHO05D000749 2.6e-06 55.5 57 40.4
Eucgr.C00061 Eucalyptus grandis HOM05D000905 ORTHO05D000749 4.4e-06 54.7 60 38.3
Phvul.004G178400 Phaseolus vulgaris HOM05D000905 ORTHO05D000749 5.8e-06 54.3 57 40.4
Psat1g051600 Pisum sativum HOM05D000905 ORTHO05D000749 5.8e-06 54.3 55 36.4
arahy.Tifrunner.gnm1.ann1.8F9W5H Arachis hypogaea HOM05D000905 ORTHO05D000749 9.9e-06 53.5 57 38.6


User provided reference genes

Program Settings