Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g23850 Coffea canephora HOM05D006291 ORTHO05D007669 1.5e-60 236.1 129 100.0
Manes.02G198400 Manihot esculenta HOM05D006291 ORTHO05D007669 3.3e-52 208.4 128 85.9
MSTRG.10473 Avicennia marina HOM05D006291 ORTHO05D007669 1.3e-51 206.5 129 85.3
Rhsim01G0107900 Rhododendron simsii HOM05D006291 ORTHO05D007669 2.8e-51 205.3 127 84.3
Duzib128G2031 Durio zibethinus HOM05D006291 ORTHO05D007669 3.7e-51 204.9 128 85.9
ECA234G1508 Erigeron canadensis HOM05D006291 ORTHO05D007669 6.3e-51 204.1 128 84.4
Actinidia02463 Actinidia chinensis HOM05D006291 ORTHO05D007669 8.2e-51 203.8 129 85.3
Duzib128G1629 Durio zibethinus HOM05D006291 ORTHO05D007669 1.1e-50 203.4 128 85.2
Migut.L01922 Erythranthe guttata HOM05D006291 ORTHO05D007669 1.4e-50 203.0 129 83.7
Gohir.D05G287200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 1.4e-50 203.0 129 83.7
Potri.006G079700 Populus trichocarpa HOM05D006291 ORTHO05D007669 1.4e-50 203.0 128 84.4
Nn8g40626 Nelumbo nucifera HOM05D006291 ORTHO05D007669 2.4e-50 202.2 128 84.4
Actinidia38532 Actinidia chinensis HOM05D006291 ORTHO05D007669 4.1e-50 201.4 128 83.6
SGA_v2.0_scaffold21G09601 Striga asiatica HOM05D006291 ORTHO05D007669 4.1e-50 201.4 129 82.2
Potri.018G149200 Populus trichocarpa HOM05D006291 ORTHO05D007669 9.1e-50 200.3 128 82.0
GSVIVG01032270001 Vitis vinifera HOM05D006291 ORTHO05D007669 1.2e-49 199.9 128 83.6
AUR62020734 Chenopodium quinoa HOM05D006291 ORTHO05D007669 1.6e-49 199.5 128 82.8
AUR62027977 Chenopodium quinoa HOM05D006291 ORTHO05D007669 1.6e-49 199.5 128 82.8
COL.COLO4_05650 Corchorus olitorius HOM05D006291 ORTHO05D007669 1.6e-49 199.5 129 82.9
THA.LOC104826574 Tarenaya hassleriana HOM05D006291 ORTHO05D007669 1.6e-49 199.5 129 83.7
Nitab4.5_0003139g0110 Nicotiana tabacum HOM05D006291 ORTHO05D007669 2.0e-49 199.1 128 81.2
EL10Ac2g03616 Beta vulgaris HOM05D006291 ORTHO05D007669 2.6e-49 198.7 128 82.0
MD13G1231800 Malus domestica HOM05D006291 ORTHO05D007669 2.6e-49 198.7 128 82.0
Sc23g0004310 Simmondsia chinensis HOM05D006291 ORTHO05D007669 2.6e-49 198.7 129 82.9
Prupe.1G063000 Prunus persica HOM05D006291 ORTHO05D007669 3.5e-49 198.4 128 82.8
PGSC0003DMG400013569 Solanum tuberosum HOM05D006291 ORTHO05D007669 3.5e-49 198.4 128 82.0
arahy.Tifrunner.gnm1.ann1.8H1PJC Arachis hypogaea HOM05D006291 ORTHO05D007669 4.5e-49 198.0 129 82.9
CSS0003994 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 5.9e-49 197.6 129 82.2
CSS0013846 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 5.9e-49 197.6 129 82.2
PGR044G0028 Punica granatum HOM05D006291 ORTHO05D007669 5.9e-49 197.6 128 81.2
Sabra06G0060300 Salix brachista HOM05D006291 ORTHO05D007669 1.0e-48 196.8 128 82.8
TAR362G0416 Trochodendron aralioides HOM05D006291 ORTHO05D007669 1.0e-48 196.8 128 79.7
unitig_8.g3543 Utricularia gibba HOM05D006291 ORTHO05D007669 1.0e-48 196.8 126 83.3
Ciclev10009894m.g Citrus clementina HOM05D006291 ORTHO05D007669 1.3e-48 196.4 128 82.0
CAN.G54.10 Capsicum annuum HOM05D006291 ORTHO05D007669 1.7e-48 196.1 128 80.5
HanXRQChr10g0309491 Helianthus annuus HOM05D006291 ORTHO05D007669 2.2e-48 195.7 127 81.9
CiPaw.16G104700 Carya illinoinensis HOM05D006291 ORTHO05D007669 2.9e-48 195.3 128 82.0
HanXRQChr12g0358571 Helianthus annuus HOM05D006291 ORTHO05D007669 2.9e-48 195.3 128 80.5
Peaxi162Scf00474g00519 Petunia axillaris HOM05D006291 ORTHO05D007669 2.9e-48 195.3 128 80.5
Solyc07g042620.4 Solanum lycopersicum HOM05D006291 ORTHO05D007669 3.8e-48 194.9 126 81.7
Sopen07g022310 Solanum pennellii HOM05D006291 ORTHO05D007669 3.8e-48 194.9 126 81.7
MD16G1236600 Malus domestica HOM05D006291 ORTHO05D007669 5.0e-48 194.5 128 81.2
RcHm_v2.0_Chr4g0397141 Rosa chinensis HOM05D006291 ORTHO05D007669 5.0e-48 194.5 128 80.5
Gorai.009G302200 Gossypium raimondii HOM05D006291 ORTHO05D007669 8.5e-48 193.7 131 80.9
HPP92_021942 Vanilla planifolia HOM05D006291 ORTHO05D007669 1.1e-47 193.4 128 78.1
Ah.10g032820 Amaranthus hybridus HOM05D006291 ORTHO05D007669 1.5e-47 193.0 128 78.9
FAN07G2657 Fragaria x ananassa HOM05D006291 ORTHO05D007669 1.5e-47 193.0 128 79.7
FvH4_4g05950 Fragaria vesca HOM05D006291 ORTHO05D007669 2.5e-47 192.2 128 79.7
Zm00001eb240760 Zea mays HOM05D006291 ORTHO05D007669 2.5e-47 192.2 128 75.8
Carub.0013s0004 Capsella rubella HOM05D006291 ORTHO05D007669 3.2e-47 191.8 129 79.1
FAN22G0966 Fragaria x ananassa HOM05D006291 ORTHO05D007669 3.2e-47 191.8 128 79.7
Gohir.A05G286200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 3.2e-47 191.8 122 82.8
PSO170G1648 Papaver somniferum HOM05D006291 ORTHO05D007669 7.2e-47 190.7 129 77.5
HPP92_021968 Vanilla planifolia HOM05D006291 ORTHO05D007669 9.4e-47 190.3 127 77.2
PSO063G7114 Papaver somniferum HOM05D006291 ORTHO05D007669 1.6e-46 189.5 129 76.7
TWI63G0490 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 1.6e-46 189.5 128 79.7
arahy.Tifrunner.gnm1.ann1.SCY2K5 Arachis hypogaea HOM05D006291 ORTHO05D007669 2.7e-46 188.7 128 80.5
CSS0029803 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 2.7e-46 188.7 135 77.8
Eucgr.G00957 Eucalyptus grandis HOM05D006291 ORTHO05D007669 2.7e-46 188.7 128 78.1
Aqoxy7G02914 Aquilegia oxysepala HOM05D006291 ORTHO05D007669 3.6e-46 188.3 129 77.5
AT2G07340 Arabidopsis thaliana HOM05D006291 ORTHO05D007669 3.6e-46 188.3 129 76.7
Thecc.10G119800 Theobroma cacao HOM05D006291 ORTHO05D007669 6.1e-46 187.6 128 81.2
VMungo1127G1563 Vigna mungo HOM05D006291 ORTHO05D007669 1.0e-45 186.8 128 77.3
CDE02G3570 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 1.4e-45 186.4 125 77.6
Glyma.15G235500 Glycine max HOM05D006291 ORTHO05D007669 1.8e-45 186.0 128 76.6
Phvul.011G206700 Phaseolus vulgaris HOM05D006291 ORTHO05D007669 1.8e-45 186.0 128 76.6
Glyma.13G197100 Glycine max HOM05D006291 ORTHO05D007669 2.3e-45 185.7 128 76.6
CDE06G0918 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 4.0e-45 184.9 127 74.8
Ca_23954_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 4.0e-45 184.9 129 76.0
CANSAT56G1353 Cannabis sativa HOM05D006291 ORTHO05D007669 6.7e-45 184.1 128 76.6
Psat0s418g0040 Pisum sativum HOM05D006291 ORTHO05D007669 8.8e-45 183.7 129 76.0
TPR.G27823 Trifolium pratense HOM05D006291 ORTHO05D007669 1.2e-44 183.3 129 75.2
Lalb_Chr01g0007741 Lupinus albus HOM05D006291 ORTHO05D007669 2.6e-44 182.2 129 74.4
CsaV3_2G009230 Cucumis sativus L. HOM05D006291 ORTHO05D007669 3.3e-44 181.8 119 80.7
Lj3g0009914 Lotus japonicus HOM05D006291 ORTHO05D007669 3.3e-44 181.8 128 74.2
Oeu028819.1 Olea europaea HOM05D006291 ORTHO05D007669 5.7e-44 181.0 113 85.0
FAN12G2114 Fragaria x ananassa HOM05D006291 ORTHO05D007669 9.7e-44 180.3 130 76.2
Sed0008839 Sechium edule HOM05D006291 ORTHO05D007669 1.3e-43 179.9 121 80.2
CANSAT56G3141 Cannabis sativa HOM05D006291 ORTHO05D007669 2.8e-43 178.7 128 75.0
CDE06G1428 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 3.7e-43 178.3 127 74.8
Ca_23960_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 3.7e-43 178.3 121 77.7
Hund19355 Selenicereus undatus HOM05D006291 ORTHO05D007669 3.7e-43 178.3 121 81.8
Sp6g13890 Schrenkiella parvula HOM05D006291 ORTHO05D007669 6.3e-43 177.6 129 76.7
ATR0580G035 Amborella trichopoda HOM05D006291 ORTHO05D007669 8.2e-43 177.2 126 73.0
Thhalv10015026m.g Eutrema salsugineum HOM05D006291 ORTHO05D007669 4.1e-42 174.9 129 76.0
Lsat_1_v5_gn_5_80980 Lactuca sativa HOM05D006291 ORTHO05D007669 4.1e-42 174.9 129 76.7
BcaB01g04158 Brassica carinata HOM05D006291 ORTHO05D007669 7.7e-41 170.6 137 70.1
Aa31LG8G11030 Aethionema arabicum HOM05D006291 ORTHO05D007669 1.0e-40 170.2 172 59.3
MELO3C003910.2 Cucumis melo HOM05D006291 ORTHO05D007669 2.9e-40 168.7 119 76.5
Dinv26485 Davidia involucrata HOM05D006291 ORTHO05D007669 3.8e-40 168.3 125 76.8
A03p16050 Brassica napus HOM05D006291 ORTHO05D007669 5.5e-39 164.5 129 72.1
BcaC01g06135 Brassica carinata HOM05D006291 ORTHO05D007669 9.4e-39 163.7 129 71.3
C03p18890 Brassica napus HOM05D006291 ORTHO05D007669 9.4e-39 163.7 129 71.3
DCAR_020455 Daucus carota HOM05D006291 ORTHO05D007669 1.6e-38 162.9 102 85.3
Medtr8g039140 Medicago truncatula HOM05D006291 ORTHO05D007669 9.8e-36 153.7 104 77.9
MBI16_g09344_MAGBIO Magnolia biondii HOM05D006291 ORTHO05D007669 1.3e-35 153.3 187 52.9
Actinidia02472 Actinidia chinensis HOM05D006291 ORTHO05D007669 8.3e-35 150.6 104 76.9
AL3G44130 Arabidopsis lyrata HOM05D006291 ORTHO05D007669 8.3e-35 150.6 99 78.8
Pp3c19_4350 Physcomitrium patens HOM05D006291 ORTHO05D007669 5.4e-34 147.9 128 60.2
TWI32G0019 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 9.1e-34 147.1 116 70.7
Mapoly0027s0144 Marchantia polymorpha HOM05D006291 ORTHO05D007669 1.3e-32 143.3 128 56.2
Atru.BG.15.p Acer truncatum HOM05D006291 ORTHO05D007669 2.3e-32 142.5 101 77.2
Nitab4.5_0000170g0080 Nicotiana tabacum HOM05D006291 ORTHO05D007669 1.9e-31 139.4 96 75.0
Dinv12620 Davidia involucrata HOM05D006291 ORTHO05D007669 2.1e-30 136.0 92 79.3
SMO200G0161 Selaginella moellendorffii HOM05D006291 ORTHO05D007669 3.7e-27 125.2 120 55.0
BcaC04g20645 Brassica carinata HOM05D006291 ORTHO05D007669 2.0e-25 119.4 93 69.9
BraA03t10896Z Brassica rapa HOM05D006291 ORTHO05D007669 4.3e-23 111.7 92 68.5
SalBow3G3584 Salvia bowleyana HOM05D006291 ORTHO05D007669 9.5e-23 110.5 109 62.4
BolC9t56988H Brassica oleracea HOM05D006291 ORTHO05D007669 2.8e-22 109.0 92 67.4
Nitab4.5_0002603g0030 Nicotiana tabacum HOM05D006291 ORTHO05D007669 2.8e-22 109.0 72 76.4
AagrBONN_evm.TU.Sc2ySwM_362.1895 Anthoceros agrestis HOM05D006291 ORTHO05D007669 1.4e-21 106.7 99 50.5
C09p41100 Brassica napus HOM05D006291 ORTHO05D007669 1.4e-21 106.7 93 65.6
Actinidia07563 Actinidia chinensis HOM05D006291 ORTHO05D007669 5.2e-21 104.8 65 83.1
Os02g0462900 Oryza sativa ssp. japonica HOM05D006291 ORTHO05D007669 1.8e-18 96.3 63 74.6
ClCG11G011210 Citrullus lanatus HOM05D006291 ORTHO05D007669 7.0e-18 94.4 62 79.0
CARHR104040 Cardamine hirsuta HOM05D006291 ORTHO05D007669 1.2e-17 93.6 62 79.0
BcaB08g35517 Brassica carinata HOM05D006291 ORTHO05D007669 1.6e-17 93.2 64 75.0
BolC3t14281H Brassica oleracea HOM05D006291 ORTHO05D007669 4.6e-17 91.7 65 75.4
BolC3t14280H Brassica oleracea HOM05D006291 ORTHO05D007669 3.0e-16 89.0 62 74.2
Cpa.g.sc91.61 Carica papaya HOM05D006291 ORTHO05D007669 3.3e-15 85.5 55 83.6
SEGI_05817 Sequoiadendron giganteum HOM05D006291 ORTHO05D007669 5.6e-15 84.7 62 67.7
PRCOL_00006384 Prasinoderma coloniale HOM05D006291 ORTHO05D007669 1.5e-12 76.6 117 35.0
MCO11G208 Micromonas commoda HOM05D006291 ORTHO05D007669 2.4e-10 69.3 117 34.2
vmacro20755 Vaccinium macrocarpon HOM05D006291 ORTHO05D007669 2.7e-09 65.9 53 73.6
CBR_g16047 Chara braunii HOM05D006291 ORTHO05D007669 1.9e-07 59.7 61 47.5
Haze_19088 Corylus avellana HOM05D000287 ORTHO05D000319 1.9e-07 59.7 37 78.4


User provided reference genes

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