Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g23410 Coffea canephora HOM05D007151 ORTHO05D009056 4.9e-193 677.6 324 100.0
Cc06_g23440 Coffea canephora HOM05D007151 ORTHO05D009056 4.9e-92 342.0 287 64.5
CSS0031191 Camellia sinensis var. sinensis HOM05D007151 ORTHO05D009056 2.6e-69 266.5 271 52.4
Nitab4.5_0000416g0100 Nicotiana tabacum HOM05D007151 ORTHO05D009056 3.2e-67 259.6 282 51.8
vmacro21874 Vaccinium macrocarpon HOM05D007151 ORTHO05D009056 2.7e-66 256.5 270 49.6
Nitab4.5_0010178g0030 Nicotiana tabacum HOM05D007151 ORTHO05D009056 6.0e-66 255.4 324 47.5
Eucgr.C00404 Eucalyptus grandis HOM05D007151 ORTHO05D009056 2.3e-65 253.4 270 48.9
Hund21618 Selenicereus undatus HOM05D007151 ORTHO05D009056 3.9e-65 252.7 285 46.7
Migut.K00359 Erythranthe guttata HOM05D007151 ORTHO05D009056 1.9e-64 250.4 272 48.2
GSVIVG01001047001 Vitis vinifera HOM05D007151 ORTHO05D009056 1.9e-64 250.4 281 47.0
Peaxi162Scf00347g00330 Petunia axillaris HOM05D007151 ORTHO05D009056 2.5e-64 250.0 271 49.4
Oeu052172.1 Olea europaea HOM05D007151 ORTHO05D009056 3.3e-64 249.6 270 49.3
Nn8g39757 Nelumbo nucifera HOM05D007151 ORTHO05D009056 9.6e-64 248.1 270 48.1
Manes.06G039800 Manihot esculenta HOM05D007151 ORTHO05D009056 1.6e-63 247.3 288 45.8
TAR626G0740 Trochodendron aralioides HOM05D007151 ORTHO05D009056 2.1e-63 246.9 267 48.3
Atru.chr7.189 Acer truncatum HOM05D007151 ORTHO05D009056 2.8e-63 246.5 294 44.6
Actinidia04263 Actinidia chinensis HOM05D007151 ORTHO05D009056 4.7e-63 245.7 271 50.6
Actinidia04269 Actinidia chinensis HOM05D007151 ORTHO05D009056 4.7e-63 245.7 288 47.2
DCAR_019364 Daucus carota HOM05D007151 ORTHO05D009056 4.7e-63 245.7 263 49.8
PGR142G3459 Punica granatum HOM05D007151 ORTHO05D009056 4.7e-63 245.7 276 48.9
Sabra18G0095800 Salix brachista HOM05D007151 ORTHO05D009056 6.2e-63 245.4 291 47.1
CAN.G520.35 Capsicum annuum HOM05D007151 ORTHO05D009056 8.1e-63 245.0 289 48.8
CANSAT11G1483 Cannabis sativa HOM05D007151 ORTHO05D009056 1.1e-62 244.6 296 44.9
Cpa.g.sc46.106 Carica papaya HOM05D007151 ORTHO05D009056 1.1e-62 244.6 266 48.1
TWI34G1895 Tripterygium wilfordii HOM05D007151 ORTHO05D009056 1.8e-62 243.8 276 47.8
PGSC0003DMG400011834 Solanum tuberosum HOM05D007151 ORTHO05D009056 2.4e-62 243.4 277 48.4
arahy.Tifrunner.gnm1.ann1.36BD1U Arachis hypogaea HOM05D007151 ORTHO05D009056 5.2e-62 242.3 276 47.5
Aqoxy7G03505 Aquilegia oxysepala HOM05D007151 ORTHO05D009056 1.2e-61 241.1 273 47.6
Cfa020867 Carpinus fangiana HOM05D007151 ORTHO05D009056 1.2e-61 241.1 288 47.9
Ciclev10008285m.g Citrus clementina HOM05D007151 ORTHO05D009056 2.0e-61 240.4 284 45.1
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 2.6e-61 240.0 275 46.5
arahy.Tifrunner.gnm1.ann1.BVF972 Arachis hypogaea HOM05D007151 ORTHO05D009056 3.4e-61 239.6 276 47.5
Potri.018G112600 Populus trichocarpa HOM05D007151 ORTHO05D009056 3.4e-61 239.6 293 46.1
CiPaw.15G171100 Carya illinoinensis HOM05D007151 ORTHO05D009056 4.4e-61 239.2 270 48.1
Gorai.013G218000 Gossypium raimondii HOM05D007151 ORTHO05D009056 7.6e-61 238.4 280 46.1
QL02p091761 Quercus lobata HOM05D007151 ORTHO05D009056 7.6e-61 238.4 274 47.8
Solyc07g005240.4 Solanum lycopersicum HOM05D007151 ORTHO05D009056 7.6e-61 238.4 277 47.7
Lsat_1_v5_gn_0_44621 Lactuca sativa HOM05D007151 ORTHO05D009056 9.9e-61 238.0 288 45.8
Lsat_1_v5_gn_5_90740 Lactuca sativa HOM05D007151 ORTHO05D009056 9.9e-61 238.0 288 45.8
Lj9A711T48 Lonicera japonica HOM05D007151 ORTHO05D009056 9.9e-61 238.0 290 47.9
BraA03t14189Z Brassica rapa HOM05D007151 ORTHO05D009056 1.7e-60 237.3 277 46.2
HanXRQChr10g0314511 Helianthus annuus HOM05D007151 ORTHO05D009056 1.7e-60 237.3 272 46.3
Sp7g16040 Schrenkiella parvula HOM05D007151 ORTHO05D009056 1.7e-60 237.3 279 46.2
Gohir.D13G192100 Gossypium hirsutum HOM05D007151 ORTHO05D009056 2.9e-60 236.5 280 45.7
A03p51030 Brassica napus HOM05D007151 ORTHO05D009056 8.4e-60 235.0 270 46.7
Gohir.A13G185600 Gossypium hirsutum HOM05D007151 ORTHO05D009056 8.4e-60 235.0 275 46.5
Thecc.09G036700 Theobroma cacao HOM05D007151 ORTHO05D009056 1.1e-59 234.6 286 45.8
Haze_19293 Corylus avellana HOM05D007151 ORTHO05D009056 1.4e-59 234.2 272 48.9
AT2G22650 Arabidopsis thaliana HOM05D007151 ORTHO05D009056 1.9e-59 233.8 277 44.4
Prupe.7G252600 Prunus persica HOM05D007151 ORTHO05D009056 1.9e-59 233.8 286 44.1
C07p49460 Brassica napus HOM05D007151 ORTHO05D009056 3.2e-59 233.0 279 46.6
Ca_25731_v3 Cicer arietinum L. HOM05D007151 ORTHO05D009056 3.2e-59 233.0 278 44.2
AL3G44210 Arabidopsis lyrata HOM05D007151 ORTHO05D009056 4.2e-59 232.6 279 45.9
MD02G1011800 Malus domestica HOM05D007151 ORTHO05D009056 5.4e-59 232.3 291 47.1
Sed0008117 Sechium edule HOM05D007151 ORTHO05D009056 7.1e-59 231.9 270 48.1
COL.COLO4_18747 Corchorus olitorius HOM05D007151 ORTHO05D009056 9.3e-59 231.5 291 44.7
CsaV3_1G028600 Cucumis sativus L. HOM05D007151 ORTHO05D009056 1.2e-58 231.1 270 47.8
Glyma.15G208200 Glycine max HOM05D007151 ORTHO05D009056 1.2e-58 231.1 280 43.9
Thhalv10025257m.g Eutrema salsugineum HOM05D007151 ORTHO05D009056 2.1e-58 230.3 270 45.9
Duzib168G1221 Durio zibethinus HOM05D007151 ORTHO05D009056 2.7e-58 229.9 280 44.6
BolC7t45451H Brassica oleracea HOM05D007151 ORTHO05D009056 4.6e-58 229.2 279 45.9
ClCG06G012110 Citrullus lanatus HOM05D007151 ORTHO05D009056 6.0e-58 228.8 272 48.9
VMungo1309G1509 Vigna mungo HOM05D007151 ORTHO05D009056 6.0e-58 228.8 272 45.2
Psat1g022920 Pisum sativum HOM05D007151 ORTHO05D009056 1.0e-57 228.0 292 42.5
FvH4_1g01491 Fragaria vesca HOM05D007151 ORTHO05D009056 1.3e-57 227.6 283 45.6
EL10Ac8g18840 Beta vulgaris HOM05D007151 ORTHO05D009056 1.7e-57 227.3 280 46.4
Lj6g0019652 Lotus japonicus HOM05D007151 ORTHO05D009056 1.7e-57 227.3 271 44.3
SGA_v2.0_scaffold206G41840 Striga asiatica HOM05D007151 ORTHO05D009056 3.9e-57 226.1 309 45.3
FAN26G2518 Fragaria x ananassa HOM05D007151 ORTHO05D009056 5.1e-57 225.7 283 45.9
THA.LOC104826576 Tarenaya hassleriana HOM05D007151 ORTHO05D009056 8.7e-57 224.9 272 45.6
SGA_v2.0_scaffold336G49159 Striga asiatica HOM05D007151 ORTHO05D009056 1.1e-56 224.6 279 46.6
Rhsim01G0049000 Rhododendron simsii HOM05D007151 ORTHO05D008498 1.9e-56 223.8 292 42.8
RcHm_v2.0_Chr2g0086401 Rosa chinensis HOM05D007151 ORTHO05D009056 2.5e-56 223.4 273 45.4
Sc08g0005090 Simmondsia chinensis HOM05D007151 ORTHO05D009056 2.5e-56 223.4 280 46.1
AUR62042027 Chenopodium quinoa HOM05D007151 ORTHO05D009056 3.3e-56 223.0 287 43.9
Dinv41414 Davidia involucrata HOM05D007151 ORTHO05D009056 1.6e-55 220.7 292 46.9
Aa31sc130G90 Aethionema arabicum HOM05D007151 ORTHO05D009056 3.6e-55 219.5 263 44.5
CARHR104080 Cardamine hirsuta HOM05D007151 ORTHO05D009056 4.8e-55 219.2 284 42.6
TPR.G31930 Trifolium pratense HOM05D007151 ORTHO05D009056 1.1e-54 218.0 288 41.7
PSO063G2965 Papaver somniferum HOM05D007151 ORTHO05D009056 1.8e-54 217.2 269 43.9
SEGI_09059 Sequoiadendron giganteum HOM05D007151 ORTHO05D009056 2.4e-54 216.9 286 40.9
MELO3C010253.2 Cucumis melo HOM05D007151 ORTHO05D009056 5.3e-54 215.7 262 47.7
Medtr2g449830 Medicago truncatula HOM05D007151 ORTHO05D009056 1.2e-53 214.5 275 41.5
Phvul.009G208100 Phaseolus vulgaris HOM05D007151 ORTHO05D009056 1.2e-53 214.5 266 44.0
FAN23G0937 Fragaria x ananassa HOM05D007151 ORTHO05D009056 1.3e-52 211.1 309 42.7
Os06g0181400 Oryza sativa ssp. japonica HOM05D007151 ORTHO05D009056 5.6e-48 195.7 272 41.5
CDE05G1962 Ceratophyllum demersum HOM05D007151 ORTHO05D009056 3.6e-47 193.0 268 40.3
Zm00001eb268060 Zea mays HOM05D007151 ORTHO05D009056 1.4e-46 191.0 273 40.7
Mapoly0072s0110 Marchantia polymorpha HOM05D007151 ORTHO05D009056 2.2e-44 183.7 311 35.4
unitig_899.g15451 Utricularia gibba HOM05D007151 ORTHO05D009056 4.9e-44 182.6 252 42.5
Ah.14g078500 Amaranthus hybridus HOM05D007151 ORTHO05D009056 4.2e-43 179.5 269 40.5
Pp3c21_4180 Physcomitrium patens HOM05D007151 ORTHO05D009056 4.2e-43 179.5 303 38.9
Sopen07g001150 Solanum pennellii HOM05D007151 ORTHO05D009056 7.1e-43 178.7 233 43.8
CSS0035136 Camellia sinensis var. sinensis HOM05D007151 ORTHO05D009056 9.3e-43 178.3 172 51.7
ATR0629G078 Amborella trichopoda HOM05D007151 ORTHO05D009056 5.3e-38 162.5 238 41.2
FvH4_5g35120 Fragaria vesca HOM05D007151 ORTHO05D009056 2.5e-32 143.7 136 52.2
Lalb_Chr08g0233881 Lupinus albus HOM05D007151 ORTHO05D009056 5.7e-32 142.5 166 44.6
Carub.0013s0015 Capsella rubella HOM05D007151 ORTHO05D009056 3.7e-31 139.8 167 46.1
AagrBONN_evm.TU.Sc2ySwM_117.1501 Anthoceros agrestis HOM05D007151 ORTHO05D009056 3.2e-27 126.7 202 35.6
Lalb_Chr08g0233871 Lupinus albus HOM05D007151 ORTHO05D009056 1.4e-19 101.3 103 49.5
PRCOL_00000450 Prasinoderma coloniale HOM05D007151 ORTHO05D009056 3.2e-19 100.1 272 32.0
CBR_g19142 Chara braunii HOM05D007151 ORTHO05D009056 1.7e-12 77.8 261 25.3
SMO364G0487 Selaginella moellendorffii HOM05D007151 ORTHO05D009056 9.4e-11 72.0 69 47.8
Cre02.g109800 Chlamydomonas reinhardtii HOM05D007151 ORTHO05D009056 1.8e-09 67.8 110 34.5
MCO12G285 Micromonas commoda HOM05D007151 ORTHO05D009056 2.3e-09 67.4 186 30.6
HPP92_018514 Vanilla planifolia HOM05D007151 ORTHO05D009056 2.8e-07 60.5 96 36.5


User provided reference genes

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