Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g22590 Coffea canephora HOM05D025805 ORTHO05D011265 8.1e-47 189.9 85 100.0
Cc00_g24240 Coffea canephora HOM05D025805 ORTHO05D011265 1.2e-45 186.0 85 96.5
Cc00_g34420 Coffea canephora HOM05D025805 ORTHO05D011265 2.8e-31 138.3 85 70.6
Cc06_g22580 Coffea canephora HOM05D025805 ORTHO05D011265 5.3e-30 134.0 89 69.7
Peaxi162Scf00324g00715 Petunia axillaris HOM05D002484 ORTHO05D002541 1.4e-11 72.8 86 47.7
Peaxi162Scf00324g00722 Petunia axillaris HOM05D002484 ORTHO05D002541 2.5e-11 72.0 85 47.1
PGSC0003DMG400011185 Solanum tuberosum HOM05D015613 ORTHO05D011265 7.9e-10 67.0 76 39.5
COL.COLO4_25964 Corchorus olitorius HOM05D002484 ORTHO05D002541 1.0e-09 66.6 87 47.1
Ciclev10029712m.g Citrus clementina HOM05D002484 ORTHO05D002541 1.8e-09 65.9 87 44.8
Ciclev10029828m.g Citrus clementina HOM05D002484 ORTHO05D002541 1.8e-09 65.9 87 44.8
Peaxi162Scf00324g00716 Petunia axillaris HOM05D002484 ORTHO05D002541 8.8e-09 63.5 87 43.7
Peaxi162Scf00324g00714 Petunia axillaris HOM05D024896 ORTHO05D002541 2.5e-08 62.0 87 43.7
Nitab4.5_0002537g0050 Nicotiana tabacum HOM05D024896 ORTHO05D011265 7.4e-08 60.5 67 47.8
CAN.G1126.34 Capsicum annuum HOM05D002484 ORTHO05D002541 1.3e-07 59.7 74 43.2
Ciclev10029711m.g Citrus clementina HOM05D002484 ORTHO05D002541 2.8e-07 58.5 87 39.1
Solyc07g009260.3 Solanum lycopersicum HOM05D002484 ORTHO05D002541 8.2e-07 57.0 74 41.9
Thecc.02G082200 Theobroma cacao HOM05D002484 ORTHO05D002541 4.1e-06 54.7 76 38.2
Sopen07g005010 Solanum pennellii HOM05D010303 ORTHO05D011265 6.9e-06 53.9 80 37.5


User provided reference genes

Program Settings