Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g21890 Coffea canephora HOM05D007235 ORTHO05D008985 0.0e+00 1561.2 765 100.0
Cc06_g21800 Coffea canephora HOM05D007235 ORTHO05D008985 0.0e+00 1459.1 772 93.0
Rhsim03G0070500 Rhododendron simsii HOM05D007235 ORTHO05D008985 3.0e-281 971.8 772 62.8
Lj2C141T11 Lonicera japonica HOM05D007235 ORTHO05D008985 1.1e-280 969.9 752 63.0
GSVIVG01033880001 Vitis vinifera HOM05D007235 ORTHO05D008985 2.5e-280 968.8 770 63.0
Rhsim03G0072800 Rhododendron simsii HOM05D007235 ORTHO05D008985 7.3e-280 967.2 772 62.8
Dinv31712 Davidia involucrata HOM05D007235 ORTHO05D008985 3.6e-279 964.9 751 63.6
Dinv31713 Davidia involucrata HOM05D007235 ORTHO05D008985 6.2e-279 964.1 751 63.4
TAR623G1371 Trochodendron aralioides HOM05D007235 ORTHO05D008985 2.7e-274 948.7 783 60.3
Cfa016637 Carpinus fangiana HOM05D007235 ORTHO05D008985 5.6e-272 941.0 755 62.1
QL07p038338 Quercus lobata HOM05D007235 ORTHO05D008985 1.1e-270 936.8 761 60.4
Atru.chr8.1458 Acer truncatum HOM05D007235 ORTHO05D008985 1.7e-268 929.5 756 61.4
CSS0040083 Camellia sinensis var. sinensis HOM05D007235 ORTHO05D008985 1.7e-268 929.5 765 61.2
Lsat_1_v5_gn_9_21080 Lactuca sativa HOM05D007235 ORTHO05D008985 2.7e-266 922.2 739 61.6
SalBow3G3787 Salvia bowleyana HOM05D007235 ORTHO05D008985 6.0e-266 921.0 760 60.1
Ciclev10011029m.g Citrus clementina HOM05D007235 ORTHO05D008985 1.0e-265 920.2 755 60.0
CiPaw.10G011900 Carya illinoinensis HOM05D007235 ORTHO05D008985 1.5e-264 916.4 763 60.8
Manes.09G053100 Manihot esculenta HOM05D007235 ORTHO05D008985 4.3e-264 914.8 762 59.2
Duzib093G1209 Durio zibethinus HOM05D007235 ORTHO05D008985 1.5e-261 906.4 757 59.3
CSS0012377 Camellia sinensis var. sinensis HOM05D007235 ORTHO05D008985 1.7e-260 902.9 767 60.4
SalBow3G1230 Salvia bowleyana HOM05D007235 ORTHO05D008985 3.8e-260 901.7 763 59.4
CSS0010120 Camellia sinensis var. sinensis HOM05D007235 ORTHO05D008985 1.9e-259 899.4 767 60.1
Potri.006G210325 Populus trichocarpa HOM05D007235 ORTHO05D008985 4.2e-259 898.3 758 59.1
Duzib106G1334 Durio zibethinus HOM05D007235 ORTHO05D008985 1.2e-258 896.7 766 57.6
Prupe.7G102400 Prunus persica HOM05D007235 ORTHO05D008985 2.7e-258 895.6 763 59.2
FAN02G2734 Fragaria x ananassa HOM05D007235 ORTHO05D008985 7.8e-258 894.0 759 58.9
Potri.006G210150 Populus trichocarpa HOM05D007235 ORTHO05D008985 1.3e-257 893.3 758 58.4
TWI74G0874 Tripterygium wilfordii HOM05D007235 ORTHO05D008985 3.9e-257 891.7 763 58.2
Migut.J01008 Erythranthe guttata HOM05D007235 ORTHO05D008985 6.6e-257 891.0 754 59.2
FvH4_6g19350 Fragaria vesca HOM05D007235 ORTHO05D008985 6.6e-257 891.0 759 58.5
TWI74G1128 Tripterygium wilfordii HOM05D007235 ORTHO05D008985 8.7e-257 890.6 763 58.3
Aqoxy2G01105 Aquilegia oxysepala HOM05D007235 ORTHO05D008985 1.9e-256 889.4 778 58.4
FAN14G5756 Fragaria x ananassa HOM05D007235 ORTHO05D008985 2.5e-256 889.0 759 58.4
MD12G1029200 Malus domestica HOM05D007235 ORTHO05D008985 4.4e-253 878.2 762 58.5
Actinidia05406 Actinidia chinensis HOM05D007235 ORTHO05D008985 2.2e-252 875.9 768 57.8
Gorai.002G238500 Gossypium raimondii HOM05D007235 ORTHO05D008985 2.9e-252 875.5 754 57.2
Aqoxy2G01076 Aquilegia oxysepala HOM05D007235 ORTHO05D008985 3.8e-252 875.2 777 57.8
MD10G1176100 Malus domestica HOM05D007235 ORTHO05D008985 7.9e-250 867.5 770 57.1
FvH4_6g19352 Fragaria vesca HOM05D007235 ORTHO05D008985 1.7e-249 866.3 755 58.7
PSO339G1765 Papaver somniferum HOM05D007235 ORTHO05D008985 6.6e-249 864.4 726 58.4
Haze_19642 Corylus avellana HOM05D007235 ORTHO05D008985 1.1e-248 863.6 764 57.9
RcHm_v2.0_Chr3g0474611 Rosa chinensis HOM05D007235 ORTHO05D008985 4.8e-247 858.2 758 57.5
FAN14G3457 Fragaria x ananassa HOM05D007235 ORTHO05D008985 8.1e-247 857.4 755 58.3
ClCG04G010150 Citrullus lanatus HOM05D007235 ORTHO05D008985 1.4e-246 856.7 759 57.4
PSO801G0111 Papaver somniferum HOM05D007235 ORTHO05D008985 5.8e-245 851.3 758 57.3
RcHm_v2.0_Chr3g0474651 Rosa chinensis HOM05D007235 ORTHO05D008985 1.4e-243 846.7 756 57.3
Migut.J01009 Erythranthe guttata HOM05D007235 ORTHO05D008985 4.2e-243 845.1 765 55.7
Rhsim03G0070400 Rhododendron simsii HOM05D007235 ORTHO05D008985 7.1e-243 844.3 769 56.7
Prupe.8G215200 Prunus persica HOM05D007235 ORTHO05D008985 1.6e-242 843.2 740 58.4
Sed0026179 Sechium edule HOM05D007235 ORTHO05D008985 3.0e-241 839.0 758 55.5
Sabra06G0161900 Salix brachista HOM05D007235 ORTHO05D008985 3.9e-241 838.6 759 56.1
Gohir.A01G204950 Gossypium hirsutum HOM05D007235 ORTHO05D008985 3.7e-239 832.0 753 55.0
CsaV3_6G040770 Cucumis sativus L. HOM05D007235 ORTHO05D008985 2.4e-238 829.3 758 55.4
MELO3C024556.2 Cucumis melo HOM05D007235 ORTHO05D008985 6.9e-238 827.8 762 55.1
DCAR_007760 Daucus carota HOM05D007235 ORTHO05D008985 1.0e-233 813.9 769 55.1
PSO801G0535 Papaver somniferum HOM05D007235 ORTHO05D008985 9.6e-232 807.4 758 54.0
ATR0820G239 Amborella trichopoda HOM05D007235 ORTHO05D008985 2.1e-231 806.2 739 54.1
DCAR_013408 Daucus carota HOM05D007235 ORTHO05D008985 4.8e-231 805.1 765 54.1
FAN02G0370 Fragaria x ananassa HOM05D007235 ORTHO05D008985 4.2e-227 792.0 753 55.5
Gohir.D01G194350 Gossypium hirsutum HOM05D007235 ORTHO05D008985 2.8e-223 779.2 686 56.9
HPP92_006812 Vanilla planifolia HOM05D007235 ORTHO05D008985 1.4e-217 760.4 782 49.7
MBI17_g35889_MAGBIO Magnolia biondii HOM05D007235 ORTHO05D008985 2.0e-208 729.9 805 49.1
MBI17_g41037_MAGBIO Magnolia biondii HOM05D007235 ORTHO05D008985 3.5e-205 719.2 683 57.2
SEGI_15434 Sequoiadendron giganteum HOM05D007235 ORTHO05D008985 5.9e-205 718.4 833 46.2
TAR623G0688 Trochodendron aralioides HOM05D007235 ORTHO05D008985 5.2e-169 599.0 474 61.0
SEGI_22450 Sequoiadendron giganteum HOM05D007235 ORTHO05D008985 1.1e-163 581.3 816 40.3
Atru.chr8.1456 Acer truncatum HOM05D007235 ORTHO05D008985 3.4e-160 569.7 469 61.2
AagrBONN_evm.TU.Sc2ySwM_228.2009 Anthoceros agrestis HOM05D007235 ORTHO05D008985 2.2e-159 567.0 757 40.8
Lj7C625T8 Lonicera japonica HOM05D007235 ORTHO05D008985 1.2e-154 551.2 471 59.2
Aqoxy2G01078 Aquilegia oxysepala HOM05D007235 ORTHO05D008985 9.2e-150 535.0 448 60.0
Mapoly0090s0057 Marchantia polymorpha HOM05D007235 ORTHO05D008985 9.2e-150 535.0 787 39.6
Haze_19643 Corylus avellana HOM05D007235 ORTHO05D008985 3.5e-141 506.5 505 53.7
Hma1.2p1_0769F.1_g215770 Hydrangea macrophylla HOM05D007235 ORTHO05D008985 5.1e-124 449.5 380 59.2
QL07p038322 Quercus lobata HOM05D007235 ORTHO05D008985 1.1e-113 415.2 352 58.0
Lj7A625G73 Lonicera japonica HOM05D007235 ORTHO05D008985 2.3e-108 397.5 280 68.9
Aqoxy2G01077 Aquilegia oxysepala HOM05D007235 ORTHO05D008985 5.9e-96 356.3 323 57.0
MBI17_g48244_MAGBIO Magnolia biondii HOM05D007235 ORTHO05D008985 6.7e-92 342.8 354 52.3
Atru.chr8.1457 Acer truncatum HOM05D007235 ORTHO05D008985 3.3e-91 340.5 259 63.3
COL.COLO4_29682 Corchorus olitorius HOM05D007235 ORTHO05D008985 2.4e-81 307.8 214 66.8
QL07p038324 Quercus lobata HOM05D007235 ORTHO05D008985 6.1e-77 293.1 211 64.5
RcHm_v2.0_Chr3g0474591 Rosa chinensis HOM05D007235 ORTHO05D008985 8.8e-76 289.3 220 62.3
COL.COLO4_29681 Corchorus olitorius HOM05D007235 ORTHO05D008985 1.3e-71 275.4 267 55.1
Cfa021070 Carpinus fangiana HOM05D007235 ORTHO05D008985 1.4e-68 265.4 181 68.0
COL.COLO4_29683 Corchorus olitorius HOM05D007235 ORTHO05D008985 3.8e-63 247.3 268 50.0
Haze_19644 Corylus avellana HOM05D007235 ORTHO05D008985 2.3e-60 238.0 226 54.9
COL.COLO4_29684 Corchorus olitorius HOM05D002712 ORTHO05D007713 3.4e-51 207.6 136 70.6
MBI17_g48245_MAGBIO Magnolia biondii HOM05D007235 ORTHO05D008985 2.5e-38 164.9 140 64.3
Cfa009503 Carpinus fangiana HOM05D007235 ORTHO05D008985 7.8e-24 116.7 651 23.2
MD14G1029500 Malus domestica HOM05D007235 ORTHO05D008985 1.2e-16 92.8 61 68.9
MBI17_g41038_MAGBIO Magnolia biondii HOM05D007235 ORTHO05D008985 1.9e-06 58.9 46 52.2
Carub.0007s1210 Capsella rubella HOM05D001324 ORTHO05D001220 3.3e-06 58.2 126 29.4


User provided reference genes

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