Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g21570 Coffea canephora HOM05D006321 ORTHO05D007929 2.2e-93 345.5 161 100.0
Dinv25432 Davidia involucrata HOM05D006321 ORTHO05D007929 8.9e-79 297.0 161 84.5
Nitab4.5_0002365g0010 Nicotiana tabacum HOM05D006321 ORTHO05D007929 9.2e-76 287.0 161 80.1
TWI60G1509 Tripterygium wilfordii HOM05D006321 ORTHO05D007929 1.6e-75 286.2 161 78.9
Nitab4.5_0000366g0180 Nicotiana tabacum HOM05D006321 ORTHO05D007929 2.1e-75 285.8 161 80.7
Prupe.1G076700 Prunus persica HOM05D006321 ORTHO05D007929 2.7e-75 285.4 161 78.9
Glyma.01G110600 Glycine max HOM05D006321 ORTHO05D007929 3.5e-75 285.0 161 80.1
Solyc07g008910.3 Solanum lycopersicum HOM05D006321 ORTHO05D007929 3.5e-75 285.0 157 81.5
CAN.G547.21 Capsicum annuum HOM05D006321 ORTHO05D007929 7.8e-75 283.9 157 82.2
CAN.G279.32 Capsicum annuum HOM05D006321 ORTHO05D007929 1.3e-74 283.1 157 82.2
QL02p047686 Quercus lobata HOM05D006321 ORTHO05D007929 1.3e-74 283.1 160 78.8
Rhsim01G0118600 Rhododendron simsii HOM05D006321 ORTHO05D007929 1.3e-74 283.1 161 79.5
Sc03g0007150 Simmondsia chinensis HOM05D006321 ORTHO05D007929 1.3e-74 283.1 161 79.5
Atru.chr7.791 Acer truncatum HOM05D006321 ORTHO05D007929 1.7e-74 282.7 157 80.9
Eucgr.C00122 Eucalyptus grandis HOM05D006321 ORTHO05D007929 3.9e-74 281.6 159 81.1
TAR622G0244 Trochodendron aralioides HOM05D006321 ORTHO05D007929 5.1e-74 281.2 157 80.3
VMungo0540G0928 Vigna mungo HOM05D006321 ORTHO05D007929 5.1e-74 281.2 161 79.5
FvH4_4g07380 Fragaria vesca HOM05D006321 ORTHO05D007929 1.1e-73 280.0 160 79.4
FAN12G2844 Fragaria x ananassa HOM05D006321 ORTHO05D007929 1.1e-73 280.0 160 79.4
FAN22G1279 Fragaria x ananassa HOM05D006321 ORTHO05D007929 1.1e-73 280.0 160 79.4
PGSC0003DMG400028738 Solanum tuberosum HOM05D006321 ORTHO05D007929 1.1e-73 280.0 157 79.6
Glyma.03G076300 Glycine max HOM05D006321 ORTHO05D007929 1.9e-73 279.3 161 78.3
MSTRG.10445 Avicennia marina HOM05D006321 ORTHO05D007929 2.5e-73 278.9 161 80.1
CiPaw.08G033200 Carya illinoinensis HOM05D006321 ORTHO05D007929 2.5e-73 278.9 157 80.3
COL.COLO4_27457 Corchorus olitorius HOM05D006321 ORTHO05D007929 2.5e-73 278.9 161 78.9
Potri.018G143500 Populus trichocarpa HOM05D006321 ORTHO05D007929 2.5e-73 278.9 157 82.2
RcHm_v2.0_Chr4g0399821 Rosa chinensis HOM05D006321 ORTHO05D007929 2.5e-73 278.9 161 78.9
arahy.Tifrunner.gnm1.ann1.CI6UTV Arachis hypogaea HOM05D006321 ORTHO05D007929 3.3e-73 278.5 157 80.3
CSS0046955 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 3.3e-73 278.5 157 80.3
MBI17_g07973_MAGBIO Magnolia biondii HOM05D006321 ORTHO05D007929 4.3e-73 278.1 157 79.0
GSVIVG01010872001 Vitis vinifera HOM05D006321 ORTHO05D007929 4.3e-73 278.1 154 81.8
PGR142G1933 Punica granatum HOM05D006321 ORTHO05D007929 5.6e-73 277.7 161 80.1
Sed0024765 Sechium edule HOM05D006321 ORTHO05D007929 5.6e-73 277.7 155 78.7
EL10Ac5g11827 Beta vulgaris HOM05D006321 ORTHO05D007929 7.3e-73 277.3 157 80.3
Phvul.006G013600 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 9.5e-73 276.9 161 78.9
Migut.L01889 Erythranthe guttata HOM05D006321 ORTHO05D007929 1.6e-72 276.2 157 80.9
FAN07G2214 Fragaria x ananassa HOM05D006321 ORTHO05D007929 2.1e-72 275.8 153 81.0
arahy.Tifrunner.gnm1.ann1.N3I1N2 Arachis hypogaea HOM05D006321 ORTHO05D007929 2.8e-72 275.4 152 82.2
CSS0019729 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 2.8e-72 275.4 157 80.3
CANSAT11G0316 Cannabis sativa HOM05D006321 ORTHO05D007929 2.8e-72 275.4 162 77.2
CSS0021189 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 1.1e-71 273.5 157 79.6
AUR62030694 Chenopodium quinoa HOM05D006321 ORTHO05D007929 1.8e-71 272.7 157 77.1
Duzib251G0486 Durio zibethinus HOM05D006321 ORTHO05D007929 1.8e-71 272.7 162 77.8
HanXRQChr16g0529271 Helianthus annuus HOM05D006321 ORTHO05D007929 2.4e-71 272.3 161 74.5
Aqoxy3G01064 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 3.1e-71 271.9 157 75.8
A10p14640 Brassica napus HOM05D006321 ORTHO05D007929 3.1e-71 271.9 161 74.5
BraA10t43551Z Brassica rapa HOM05D006321 ORTHO05D007929 3.1e-71 271.9 161 74.5
Ca_14974_v3 Cicer arietinum L. HOM05D006321 ORTHO05D007929 3.1e-71 271.9 161 77.0
ECA240G2363 Erigeron canadensis HOM05D006321 ORTHO05D007929 3.1e-71 271.9 154 78.6
AUR62030699 Chenopodium quinoa HOM05D006321 ORTHO05D007929 4.0e-71 271.6 157 76.4
Thhalv10014893m.g Eutrema salsugineum HOM05D006321 ORTHO05D007929 4.0e-71 271.6 161 74.5
BcaC04g19986 Brassica carinata HOM05D006321 ORTHO05D007929 5.2e-71 271.2 161 73.9
Lalb_Chr04g0263391 Lupinus albus HOM05D006321 ORTHO05D007929 5.2e-71 271.2 160 75.6
THA.LOC104817778 Tarenaya hassleriana HOM05D006321 ORTHO05D007929 6.8e-71 270.8 162 75.9
CARHR271020 Cardamine hirsuta HOM05D006321 ORTHO05D007929 8.9e-71 270.4 161 73.9
Ciclev10008911m.g Citrus clementina HOM05D006321 ORTHO05D007929 8.9e-71 270.4 160 75.6
Phvul.003G138800 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 8.9e-71 270.4 161 76.4
Phvul.003G139178 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 8.9e-71 270.4 161 76.4
Potri.006G076300 Populus trichocarpa HOM05D006321 ORTHO05D007929 1.2e-70 270.0 157 79.0
AL8G33200 Arabidopsis lyrata HOM05D006321 ORTHO05D007929 1.5e-70 269.6 161 73.3
Medtr3g465100 Medicago truncatula HOM05D006321 ORTHO05D007929 1.5e-70 269.6 161 76.4
Sp6g18970 Schrenkiella parvula HOM05D006321 ORTHO05D007929 1.5e-70 269.6 161 73.9
Thecc.09G184700 Theobroma cacao HOM05D006321 ORTHO05D007929 1.5e-70 269.6 154 79.9
Carub.0008s1773 Capsella rubella HOM05D006321 ORTHO05D007929 2.0e-70 269.2 161 72.7
Gohir.A06G171500 Gossypium hirsutum HOM05D006321 ORTHO05D007929 2.6e-70 268.9 153 79.7
Gorai.010G210200 Gossypium raimondii HOM05D006321 ORTHO05D007929 2.6e-70 268.9 153 79.7
Ah.12g059430 Amaranthus hybridus HOM05D006321 ORTHO05D007929 3.4e-70 268.5 155 79.4
BcaB08g36085 Brassica carinata HOM05D006321 ORTHO05D007929 3.4e-70 268.5 161 73.9
Psat2g182520 Pisum sativum HOM05D006321 ORTHO05D004512 3.4e-70 268.5 157 76.4
Psat4g027120 Pisum sativum HOM05D006321 ORTHO05D007929 3.4e-70 268.5 157 76.4
ECA234G0872 Erigeron canadensis HOM05D006321 ORTHO05D007929 5.8e-70 267.7 154 77.3
AT5G57230 Arabidopsis thaliana HOM05D006321 ORTHO05D007929 7.6e-70 267.3 161 72.7
Gohir.D06G179600 Gossypium hirsutum HOM05D006321 ORTHO05D007929 9.9e-70 266.9 153 79.1
Manes.02G106300 Manihot esculenta HOM05D006321 ORTHO05D007929 9.9e-70 266.9 157 77.1
MELO3C012967.2 Cucumis melo HOM05D006321 ORTHO05D007929 1.7e-69 266.2 155 75.5
Aa31LG3G13120 Aethionema arabicum HOM05D006321 ORTHO05D007929 2.2e-69 265.8 161 73.9
HPP92_002000 Vanilla planifolia HOM05D006321 ORTHO05D007929 2.2e-69 265.8 157 74.5
SGA_v2.0_scaffold21G09650 Striga asiatica HOM05D006321 ORTHO05D007929 2.9e-69 265.4 154 79.2
TPR.G32885 Trifolium pratense HOM05D006321 ORTHO05D007929 2.9e-69 265.4 161 75.8
CsaV3_3G025050 Cucumis sativus L. HOM05D006321 ORTHO05D007929 3.8e-69 265.0 155 75.5
COL.COLO4_07534 Corchorus olitorius HOM05D006321 ORTHO05D007929 4.9e-69 264.6 151 80.1
Lsat_1_v5_gn_7_55681 Lactuca sativa HOM05D006321 ORTHO05D007929 4.9e-69 264.6 157 77.7
HanXRQChr03g0068421 Helianthus annuus HOM05D006321 ORTHO05D007929 6.4e-69 264.2 148 78.4
C09p49090 Brassica napus HOM05D006321 ORTHO05D007929 8.4e-69 263.8 169 70.4
PSO339G6079 Papaver somniferum HOM05D006321 ORTHO05D007929 8.4e-69 263.8 162 74.1
BolC9t57758H Brassica oleracea HOM05D006321 ORTHO05D007929 1.9e-68 262.7 167 70.7
Lj6g0010246 Lotus japonicus HOM05D006321 ORTHO05D007929 1.9e-68 262.7 154 76.6
PSO384G3851 Papaver somniferum HOM05D006321 ORTHO05D007929 2.1e-67 259.2 162 72.8
MD16G1249800 Malus domestica HOM05D006321 ORTHO05D007929 2.7e-67 258.8 148 80.4
Os06g0482200 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 3.5e-67 258.5 156 73.1
Hund14984 Selenicereus undatus HOM05D006321 ORTHO05D007929 1.0e-66 256.9 214 58.9
Os10g0162834 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 5.1e-66 254.6 156 71.8
Zm00001eb161640 Zea mays HOM05D006321 ORTHO05D007929 2.8e-64 248.8 148 73.0
Actinidia01283 Actinidia chinensis HOM05D006321 ORTHO05D007929 6.2e-64 247.7 161 73.3
Sopen07g004840 Solanum pennellii HOM05D003168 ORTHO05D003590 8.1e-64 247.3 135 82.2
Nn2g12444 Nelumbo nucifera HOM05D006321 ORTHO05D007929 6.9e-63 244.2 137 78.8
Cpa.g.sc95.16 Carica papaya HOM05D006321 ORTHO05D007929 9.0e-63 243.8 161 71.4
unitig_736.g22252 Utricularia gibba HOM05D006321 ORTHO05D007929 7.6e-62 240.7 136 78.7
CDE06G2300 Ceratophyllum demersum HOM05D006321 ORTHO05D007929 2.2e-61 239.2 139 77.7
MD13G1243200 Malus domestica HOM05D006321 ORTHO05D007929 2.2e-61 239.2 138 78.3
AUR62036340 Chenopodium quinoa HOM05D006321 ORTHO05D007929 8.4e-61 237.3 135 77.8
SEGI_34333 Sequoiadendron giganteum HOM05D006321 ORTHO05D007929 7.1e-60 234.2 155 65.8
Sabra18G0117000 Salix brachista HOM05D003168 ORTHO05D003525 1.6e-56 223.0 117 87.2
Haze_22010 Corylus avellana HOM05D006321 ORTHO05D007929 4.8e-56 221.5 152 69.1
Migut.G01073 Erythranthe guttata HOM05D006321 ORTHO05D007929 1.4e-55 219.9 116 86.2
Oeu044678.1 Olea europaea HOM05D006321 ORTHO05D007929 2.6e-54 215.7 114 83.3
Psat5g235880 Pisum sativum HOM05D006321 ORTHO05D007929 3.4e-54 215.3 136 72.1
Sabra06G0057200 Salix brachista HOM05D006321 ORTHO05D007929 7.1e-52 207.6 205 54.1
Mapoly0003s0233 Marchantia polymorpha HOM05D006321 ORTHO05D007929 9.3e-52 207.2 142 61.3
Oeu030095.1 Olea europaea HOM05D006321 ORTHO05D007929 1.6e-51 206.5 121 78.5
vmacro20823 Vaccinium macrocarpon HOM05D006321 ORTHO05D007929 6.0e-51 204.5 135 68.9
Pp3c22_13020 Physcomitrium patens HOM05D006321 ORTHO05D007929 7.9e-51 204.1 152 58.6
Mapoly0003s0169 Marchantia polymorpha HOM05D006321 ORTHO05D007929 6.7e-50 201.1 142 59.9
FAN17G2672 Fragaria x ananassa HOM05D006321 ORTHO05D007929 1.1e-49 200.3 158 62.7
PSO541G2755 Papaver somniferum HOM05D006321 ORTHO05D007929 6.2e-48 194.5 116 73.3
ATR1152G025 Amborella trichopoda HOM05D006321 ORTHO05D007929 2.6e-46 189.1 101 82.2
Peaxi162Scf00324g00017 Petunia axillaris HOM05D006321 ORTHO05D007929 9.9e-46 187.2 161 57.8
Aqoxy108s003 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 1.2e-43 180.3 132 61.4
Lj6A87G16 Lonicera japonica HOM05D006321 ORTHO05D007929 1.6e-43 179.9 95 83.2
DCAR_005801 Daucus carota HOM05D006321 ORTHO05D007929 5.6e-41 171.4 100 73.0
CBR_g19745 Chara braunii HOM05D006321 ORTHO05D007929 2.2e-37 159.5 171 49.1
BcaB05g22329 Brassica carinata HOM05D006321 ORTHO05D007929 3.8e-37 158.7 152 56.6
TAR629G2308 Trochodendron aralioides HOM05D006321 ORTHO05D007929 2.7e-35 152.5 135 58.5
Dinv41168 Davidia involucrata HOM05D000015 ORTHO05D003525 6.0e-35 151.4 86 80.2
COL.COLO4_32845 Corchorus olitorius HOM05D006321 ORTHO05D007929 2.5e-33 146.0 85 77.6
Lj6A100T20 Lonicera japonica HOM05D006321 ORTHO05D007929 2.5e-25 119.4 67 79.1
Sopen00g012850 Solanum pennellii HOM05D006321 ORTHO05D007929 4.2e-20 102.1 57 78.9
BolC2t07570H Brassica oleracea HOM05D006321 ORTHO05D007929 1.0e-13 80.9 60 63.3


User provided reference genes

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