Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g21500 Coffea canephora HOM05D005516 ORTHO05D006713 3.1e-76 288.5 159 100.0
FAN23G0165 Fragaria x ananassa HOM05D005516 ORTHO05D006713 1.1e-36 157.1 153 65.4
FAN26G2397 Fragaria x ananassa HOM05D005516 ORTHO05D006713 3.2e-36 155.6 153 64.7
GSVIVG01029962001 Vitis vinifera HOM05D005516 ORTHO05D006713 3.2e-36 155.6 163 63.8
FvH4_1g29880 Fragaria vesca HOM05D005516 ORTHO05D006713 4.1e-36 155.2 153 64.7
FAN19G1175 Fragaria x ananassa HOM05D005516 ORTHO05D006713 5.4e-36 154.8 132 59.1
Dinv13791 Davidia involucrata HOM05D005516 ORTHO05D006713 9.2e-36 154.1 143 60.1
Manes.08G152800 Manihot esculenta HOM05D005516 ORTHO05D006713 1.2e-35 153.7 169 63.3
Thecc.05G241500 Theobroma cacao HOM05D005516 ORTHO05D006713 2.3e-34 149.4 165 61.2
Cfa017721 Carpinus fangiana HOM05D005516 ORTHO05D006713 3.0e-34 149.1 104 82.7
QL07p017420 Quercus lobata HOM05D005516 ORTHO05D006713 8.6e-34 147.5 85 82.4
RcHm_v2.0_Chr3g0496031 Rosa chinensis HOM05D005516 ORTHO05D006713 1.5e-33 146.7 101 89.1
VMungo1383G1686 Vigna mungo HOM05D005516 ORTHO05D006713 1.5e-33 146.7 108 82.4
Atru.chr2.1522 Acer truncatum HOM05D005516 ORTHO05D006713 1.9e-33 146.4 105 81.9
Duzib128G1828 Durio zibethinus HOM05D005516 ORTHO05D006713 1.9e-33 146.4 149 54.4
Lj1g0004780 Lotus japonicus HOM05D005516 ORTHO05D006713 1.9e-33 146.4 155 62.6
Phvul.001G105600 Phaseolus vulgaris HOM05D005516 ORTHO05D006713 1.9e-33 146.4 108 82.4
Haze_20402 Corylus avellana HOM05D005516 ORTHO05D006713 2.5e-33 146.0 104 85.6
MELO3C008865.2 Cucumis melo HOM05D005516 ORTHO05D006713 3.3e-33 145.6 103 85.4
CsaV3_4G031610 Cucumis sativus L. HOM05D005516 ORTHO05D006713 3.3e-33 145.6 103 85.4
Hma1.2p1_0526F.1_g172910 Hydrangea macrophylla HOM05D005516 ORTHO05D006713 7.3e-33 144.4 112 69.6
Potri.019G040400 Populus trichocarpa HOM05D005516 ORTHO05D006713 9.5e-33 144.1 82 79.3
CSS0003853 Camellia sinensis var. sinensis HOM05D005516 ORTHO05D006713 1.2e-32 143.7 84 78.6
CSS0039228 Camellia sinensis var. sinensis HOM05D005516 ORTHO05D006713 1.6e-32 143.3 87 78.2
Hma1.2p1_0106F.1_g051205 Hydrangea macrophylla HOM05D005516 ORTHO05D006713 1.6e-32 143.3 82 81.7
MD14G1009500 Malus domestica HOM05D005516 ORTHO05D006713 2.1e-32 142.9 163 62.0
Hma1.2p1_0526F.1_g172920 Hydrangea macrophylla HOM05D005516 ORTHO05D006713 2.8e-32 142.5 86 75.6
arahy.Tifrunner.gnm1.ann1.BMR428 Arachis hypogaea HOM05D005516 ORTHO05D006713 3.6e-32 142.1 106 70.8
Glyma.16G035800 Glycine max HOM05D005516 ORTHO05D006713 3.6e-32 142.1 122 59.8
Gorai.013G196100 Gossypium raimondii HOM05D005516 ORTHO05D006713 3.6e-32 142.1 86 74.4
Nitab4.5_0000811g0010 Nicotiana tabacum HOM05D005516 ORTHO05D006713 3.6e-32 142.1 162 59.3
ClCG04G004680 Citrullus lanatus HOM05D005516 ORTHO05D006713 4.7e-32 141.7 81 80.2
Duzib177G0157 Durio zibethinus HOM05D005516 ORTHO05D006713 4.7e-32 141.7 145 54.5
Potri.013G066000 Populus trichocarpa HOM05D005516 ORTHO05D006713 4.7e-32 141.7 82 81.7
Lalb_Chr14g0364851 Lupinus albus HOM05D005516 ORTHO05D006713 6.2e-32 141.4 107 73.8
Prupe.7G015800 Prunus persica HOM05D005516 ORTHO05D006713 6.2e-32 141.4 102 86.3
CiPaw.09G166400 Carya illinoinensis HOM05D005516 ORTHO05D006713 8.1e-32 141.0 82 80.5
Ca_08316_v3 Cicer arietinum L. HOM05D005516 ORTHO05D006713 8.1e-32 141.0 156 56.4
Glyma.19G117300 Glycine max HOM05D005516 ORTHO05D006713 8.1e-32 141.0 157 62.4
MD12G1011900 Malus domestica HOM05D005516 ORTHO05D006713 8.1e-32 141.0 102 85.3
Actinidia06205 Actinidia chinensis HOM05D005516 ORTHO05D006713 1.1e-31 140.6 105 82.9
Oeu044207.1 Olea europaea HOM05D005516 ORTHO05D006713 1.8e-31 139.8 134 55.2
CANSAT78G1214 Cannabis sativa HOM05D005516 ORTHO05D006713 2.3e-31 139.4 100 76.0
Sed0005064 Sechium edule HOM05D005516 ORTHO05D006713 2.3e-31 139.4 103 80.6
TWI60G0181 Tripterygium wilfordii HOM05D005516 ORTHO05D006713 2.3e-31 139.4 104 81.7
MBI05_g16554_MAGBIO Magnolia biondii HOM05D005516 ORTHO05D006713 4.0e-31 138.7 170 54.7
PSO339G3932 Papaver somniferum HOM05D005516 ORTHO05D006713 4.0e-31 138.7 106 67.0
TWI32G0326 Tripterygium wilfordii HOM05D005516 ORTHO05D006713 4.0e-31 138.7 165 57.6
arahy.Tifrunner.gnm1.ann1.253MNK Arachis hypogaea HOM05D005516 ORTHO05D006713 5.2e-31 138.3 106 79.2
Nitab4.5_0000613g0140 Nicotiana tabacum HOM05D005516 ORTHO05D006713 5.2e-31 138.3 140 52.9
Sc07g0007460 Simmondsia chinensis HOM05D005516 ORTHO05D006713 1.2e-30 137.1 95 68.4
CSS0031486 Camellia sinensis var. sinensis HOM05D005516 ORTHO05D006713 1.5e-30 136.7 86 74.4
COL.COLO4_20092 Corchorus olitorius HOM05D005516 ORTHO05D006713 1.5e-30 136.7 84 72.6
Gorai.004G252300 Gossypium raimondii HOM05D005516 ORTHO05D006713 1.5e-30 136.7 163 52.8
HanXRQChr13g0406451 Helianthus annuus HOM05D005516 ORTHO05D006713 2.0e-30 136.3 81 72.8
Duzib106G1703 Durio zibethinus HOM05D005516 ORTHO05D006713 2.6e-30 136.0 170 50.6
PSO384G4582 Papaver somniferum HOM05D005516 ORTHO05D006713 2.6e-30 136.0 106 66.0
Psat3g086560 Pisum sativum HOM05D005516 ORTHO05D006713 2.6e-30 136.0 106 76.4
Rhsim08G0097500 Rhododendron simsii HOM05D005516 ORTHO05D006713 2.6e-30 136.0 142 52.8
PGSC0003DMG400028211 Solanum tuberosum HOM05D005516 ORTHO05D006713 2.6e-30 136.0 85 71.8
vmacro08774 Vaccinium macrocarpon HOM05D005516 ORTHO05D006713 2.6e-30 136.0 81 76.5
Sabra13G0057700 Salix brachista HOM05D005516 ORTHO05D006713 3.4e-30 135.6 80 80.0
SGA_v2.0_scaffold69G23215 Striga asiatica HOM05D000039 ORTHO05D000370 4.4e-30 135.2 85 70.6
DCAR_020653 Daucus carota HOM05D005516 ORTHO05D006713 5.8e-30 134.8 160 59.4
Hund20711 Selenicereus undatus HOM05D005516 ORTHO05D006713 5.8e-30 134.8 105 61.0
Sopen10g031880 Solanum pennellii HOM05D005516 ORTHO05D006713 5.8e-30 134.8 85 71.8
Eucgr.K01534 Eucalyptus grandis HOM05D005516 ORTHO05D006713 7.6e-30 134.4 136 52.2
Hund20712 Selenicereus undatus HOM05D005516 ORTHO05D006713 7.6e-30 134.4 105 61.0
CAN.G128.137 Capsicum annuum HOM05D005516 ORTHO05D006713 9.9e-30 134.0 85 70.6
Ciclev10022543m.g Citrus clementina HOM05D005516 ORTHO05D006713 9.9e-30 134.0 169 57.4
Solyc10g081380.2 Solanum lycopersicum HOM05D005516 ORTHO05D006713 1.3e-29 133.7 85 70.6
MSTRG.6254 Avicennia marina HOM05D005516 ORTHO05D006713 2.2e-29 132.9 141 52.5
Carub.0006s1607 Capsella rubella HOM05D005516 ORTHO05D006713 2.9e-29 132.5 108 73.1
AT5G17840 Arabidopsis thaliana HOM05D005516 ORTHO05D006713 3.7e-29 132.1 108 71.3
Thhalv10014907m.g Eutrema salsugineum HOM05D005516 ORTHO05D006713 3.7e-29 132.1 108 72.2
Lsat_1_v5_gn_5_154420 Lactuca sativa HOM05D005516 ORTHO05D006713 4.9e-29 131.7 82 72.0
Gohir.A08G219566 Gossypium hirsutum HOM05D005516 ORTHO05D006713 6.4e-29 131.3 156 56.4
Sp6g26410 Schrenkiella parvula HOM05D005516 ORTHO05D006713 6.4e-29 131.3 119 64.7
Medtr7g086700 Medicago truncatula HOM05D005516 ORTHO05D006713 8.4e-29 131.0 95 83.2
AL6G28930 Arabidopsis lyrata HOM05D005516 ORTHO05D006713 1.1e-28 130.6 86 66.3
CARHR195330 Cardamine hirsuta HOM05D005516 ORTHO05D006713 1.1e-28 130.6 87 69.0
Peaxi162Scf00575g00619 Petunia axillaris HOM05D005516 ORTHO05D006713 1.1e-28 130.6 85 69.4
TPR.G34794 Trifolium pratense HOM05D005516 ORTHO05D006713 1.4e-28 130.2 77 75.3
SGA_v2.0_scaffold66G22373 Striga asiatica HOM05D005516 ORTHO05D006713 4.1e-28 128.6 85 67.1
C02p25840 Brassica napus HOM05D005516 ORTHO05D006713 9.2e-28 127.5 109 67.9
ECA248G2342 Erigeron canadensis HOM05D005516 ORTHO05D006713 9.2e-28 127.5 103 74.8
vmacro04358 Vaccinium macrocarpon HOM05D005516 ORTHO05D006713 9.2e-28 127.5 84 70.2
MSTRG.26204 Avicennia marina HOM05D005516 ORTHO05D006713 1.6e-27 126.7 163 47.9
vmacro18891 Vaccinium macrocarpon HOM05D005516 ORTHO05D006713 2.7e-27 125.9 84 69.0
Gohir.A13G161100 Gossypium hirsutum HOM05D005516 ORTHO05D006713 3.5e-27 125.6 146 50.7
SEGI_32239 Sequoiadendron giganteum HOM05D005516 ORTHO05D006713 3.5e-27 125.6 77 71.4
THA.LOC104820795 Tarenaya hassleriana HOM05D005516 ORTHO05D006713 3.5e-27 125.6 102 57.8
A03p08520 Brassica napus HOM05D005516 ORTHO05D006713 6.0e-27 124.8 108 69.4
CDE07G0498 Ceratophyllum demersum HOM05D005516 ORTHO05D006713 6.0e-27 124.8 84 66.7
BcaB01g04919 Brassica carinata HOM05D005516 ORTHO05D006713 1.0e-26 124.0 98 57.1
Aa31LG11G11740 Aethionema arabicum HOM05D005516 ORTHO05D006713 1.3e-26 123.6 104 55.8
Gohir.D13G166400 Gossypium hirsutum HOM05D005516 ORTHO05D006713 1.3e-26 123.6 149 47.0
BcaB01g05159 Brassica carinata HOM05D005516 ORTHO05D006713 2.3e-26 122.9 86 64.0
C03p09930 Brassica napus HOM05D005516 ORTHO05D006713 2.3e-26 122.9 86 64.0
BolC3t13481H Brassica oleracea HOM05D005516 ORTHO05D006713 2.3e-26 122.9 86 64.0
BraA03t10176Z Brassica rapa HOM05D005516 ORTHO05D006713 2.3e-26 122.9 86 64.0
Zm00001eb052720 Zea mays HOM05D005516 ORTHO05D006713 2.3e-26 122.9 107 68.2
AUR62032011 Chenopodium quinoa HOM05D005516 ORTHO05D006713 3.9e-26 122.1 136 45.6
AUR62018088 Chenopodium quinoa HOM05D005516 ORTHO05D006713 5.1e-26 121.7 83 65.1
Nitab4.5_0000404g0040 Nicotiana tabacum HOM05D005516 ORTHO05D006713 6.6e-26 121.3 79 69.6
DCAR_016961 Daucus carota HOM05D005516 ORTHO05D006713 1.1e-25 120.6 68 76.5
EL10Ac3g06621 Beta vulgaris HOM05D005516 ORTHO05D006713 1.9e-25 119.8 103 75.7
Cpa.g.sc161.38 Carica papaya HOM05D005516 ORTHO05D006713 2.5e-25 119.4 84 63.1
Ah.13g074870 Amaranthus hybridus HOM05D005516 ORTHO05D006713 7.3e-25 117.9 144 46.5
HPP92_000977 Vanilla planifolia HOM05D005516 ORTHO05D006713 9.6e-25 117.5 138 46.4
Os03g0656201 Oryza sativa ssp. japonica HOM05D005516 ORTHO05D006713 2.8e-24 115.9 98 72.4
HPP92_001001 Vanilla planifolia HOM05D005516 ORTHO05D006713 2.8e-24 115.9 130 47.7
Zm00001eb218270 Zea mays HOM05D005516 ORTHO05D006713 3.6e-24 115.5 107 65.4
Aqoxy1G00508 Aquilegia oxysepala HOM05D005516 ORTHO05D006713 1.4e-23 113.6 130 49.2
unitig_0.g583 Utricularia gibba HOM05D005516 ORTHO05D006713 5.2e-23 111.7 87 60.9
Pp3c8_890 Physcomitrium patens HOM05D005516 ORTHO05D006713 9.9e-22 107.5 109 57.8
Lalb_Chr24g0401101 Lupinus albus HOM05D005516 ORTHO05D006713 1.3e-21 107.1 61 82.0
Mapoly0020s0169 Marchantia polymorpha HOM05D005516 ORTHO05D006713 1.4e-20 103.6 100 64.0
Oeu029775.1 Olea europaea HOM05D005516 ORTHO05D006713 5.4e-20 101.7 121 47.1
BcaB05g23282 Brassica carinata HOM05D005516 ORTHO05D006713 1.6e-19 100.1 148 39.2
Actinidia07963 Actinidia chinensis HOM05D005516 ORTHO05D006713 1.3e-18 97.1 69 66.7
Peaxi162Scf00575g00620 Petunia axillaris HOM05D005516 ORTHO05D006713 1.3e-18 97.1 84 53.6
Ciclev10013836m.g Citrus clementina HOM05D005516 ORTHO05D006713 1.9e-17 93.2 66 62.1
SalBow6G3354 Salvia bowleyana HOM05D005516 ORTHO05D006713 7.3e-17 91.3 52 71.2
BcaC03g15036 Brassica carinata HOM05D005516 ORTHO05D006713 1.8e-15 86.7 64 57.8
BolC2t08658H Brassica oleracea HOM05D005516 ORTHO05D006713 1.8e-15 86.7 64 57.8
Gohir.A06G040900 Gossypium hirsutum HOM05D005516 ORTHO05D006713 4.4e-14 82.0 79 72.2
Gohir.D05G109301 Gossypium hirsutum HOM05D005516 ORTHO05D006713 4.4e-14 82.0 79 72.2
Gohir.D02G044500 Gossypium hirsutum HOM05D005516 ORTHO05D006713 9.9e-14 80.9 79 62.0
TAR633G1766 Trochodendron aralioides HOM05D005516 ORTHO05D006713 1.1e-12 77.4 45 73.3
Nn6g32378 Nelumbo nucifera HOM05D005516 ORTHO05D006713 6.6e-10 68.2 48 62.5
CBR_g28089 Chara braunii HOM05D005516 ORTHO05D006713 8.1e-08 61.2 64 59.4
SMO367G1142 Selaginella moellendorffii HOM05D005516 ORTHO05D006713 9.9e-06 54.3 43 58.1


User provided reference genes

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