Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g21190 Coffea canephora HOM05D006876 ORTHO05D008708 4.7e-135 484.6 251 100.0
Sopen10g028620 Solanum pennellii HOM05D006876 ORTHO05D008708 1.5e-80 303.5 251 61.4
Solyc10g076930.2 Solanum lycopersicum HOM05D006876 ORTHO05D008708 3.3e-80 302.4 251 61.4
Peaxi162Scf00003g05358 Petunia axillaris HOM05D006876 ORTHO05D008708 7.4e-80 301.2 251 61.8
PGSC0003DMG400007191 Solanum tuberosum HOM05D006876 ORTHO05D008708 8.1e-79 297.7 252 61.9
MSTRG.10760 Avicennia marina HOM05D006876 ORTHO05D008708 2.6e-77 292.7 254 61.4
SalBow1G4764 Salvia bowleyana HOM05D006876 ORTHO05D008708 1.0e-76 290.8 236 61.0
Dinv13650 Davidia involucrata HOM05D006876 ORTHO05D008708 8.4e-76 287.7 216 66.2
Nitab4.5_0000123g0090 Nicotiana tabacum HOM05D006876 ORTHO05D008708 1.6e-74 283.5 252 58.7
SGA_v2.0_scaffold123G33492 Striga asiatica HOM05D001269 ORTHO05D001083 1.6e-74 283.5 254 59.1
Migut.K00190 Erythranthe guttata HOM05D006876 ORTHO05D008708 2.7e-74 282.7 205 66.3
RhsimUnG0021300 Rhododendron simsii HOM05D006876 ORTHO05D008708 4.6e-74 282.0 260 59.6
Nitab4.5_0002131g0070 Nicotiana tabacum HOM05D006876 ORTHO05D008708 1.3e-73 280.4 259 58.3
CiPaw.09G161500 Carya illinoinensis HOM05D006876 ORTHO05D008708 7.4e-72 274.6 196 68.4
MD12G1111100 Malus domestica HOM05D006876 ORTHO05D008708 1.3e-71 273.9 201 66.7
CSS0024544 Camellia sinensis var. sinensis HOM05D006876 ORTHO05D008708 3.7e-71 272.3 228 58.3
Hma1.2p1_0694F.1_g204340 Hydrangea macrophylla HOM05D006876 ORTHO05D008708 4.1e-70 268.9 248 56.9
MELO3C019167.2 Cucumis melo HOM05D006876 ORTHO05D008708 6.9e-70 268.1 199 67.3
Sed0006068 Sechium edule HOM05D006876 ORTHO05D008708 6.9e-70 268.1 208 63.0
unitig_899.g15477 Utricularia gibba HOM05D006876 ORTHO05D008708 6.9e-70 268.1 207 63.3
Manes.09G001600 Manihot esculenta HOM05D006876 ORTHO05D008708 9.0e-70 267.7 205 64.9
vmacro07595 Vaccinium macrocarpon HOM05D006876 ORTHO05D008708 9.0e-70 267.7 281 55.9
CsaV3_4G029000 Cucumis sativus L. HOM05D006876 ORTHO05D008708 2.0e-69 266.5 199 65.8
ClCG04G005040 Citrullus lanatus HOM05D006876 ORTHO05D008708 7.6e-69 264.6 203 65.0
Potri.006G026300 Populus trichocarpa HOM05D006876 ORTHO05D008708 1.0e-68 264.2 224 61.2
Prupe.7G023500 Prunus persica HOM05D006876 ORTHO05D008708 5.0e-68 261.9 214 59.8
PGR142G2444 Punica granatum HOM05D006876 ORTHO05D008708 5.0e-68 261.9 207 63.8
Migut.K00192 Erythranthe guttata HOM05D006876 ORTHO05D008708 1.1e-67 260.8 193 65.3
PSO384G4569 Papaver somniferum HOM05D006876 ORTHO05D008708 1.9e-67 260.0 208 59.6
FAN19G1913 Fragaria x ananassa HOM05D006876 ORTHO05D008708 4.2e-67 258.8 200 64.0
PSO339G4949 Papaver somniferum HOM05D006876 ORTHO05D008708 4.2e-67 258.8 261 53.3
Gohir.A13G086570 Gossypium hirsutum HOM05D006876 ORTHO05D008708 1.6e-66 256.9 218 59.6
GSVIVG01025828001 Vitis vinifera HOM05D006876 ORTHO05D008708 1.6e-66 256.9 213 62.0
Atru.chr8.919 Acer truncatum HOM05D006876 ORTHO05D008708 2.7e-66 256.1 195 64.6
Cpa.g.sc33.174 Carica papaya HOM05D006876 ORTHO05D008708 2.7e-66 256.1 202 61.9
Sabra06G0019500 Salix brachista HOM05D006876 ORTHO05D008708 2.7e-66 256.1 224 58.9
Gohir.D13G092600 Gossypium hirsutum HOM05D006876 ORTHO05D008708 4.6e-66 255.4 221 59.3
FAN28G2491 Fragaria x ananassa HOM05D006876 ORTHO05D008708 1.3e-65 253.8 200 63.0
RcHm_v2.0_Chr7g0183121 Rosa chinensis HOM05D006876 ORTHO05D008708 1.3e-65 253.8 200 62.5
MBI19_g10813_MAGBIO Magnolia biondii HOM05D006876 ORTHO05D008708 2.3e-65 253.1 216 59.7
QL07p015416 Quercus lobata HOM05D006876 ORTHO05D008708 2.3e-65 253.1 225 56.9
THA.LOC104803253 Tarenaya hassleriana HOM05D006876 ORTHO05D008708 3.0e-65 252.7 208 60.1
Ciclev10012641m.g Citrus clementina HOM05D006876 ORTHO05D008708 3.9e-65 252.3 207 60.4
Thecc.05G117700 Theobroma cacao HOM05D006876 ORTHO05D008708 3.9e-65 252.3 229 59.0
Cfa019902 Carpinus fangiana HOM05D006876 ORTHO05D008708 5.1e-65 251.9 205 61.5
Ah.13g077470 Amaranthus hybridus HOM05D006876 ORTHO05D008708 6.7e-65 251.5 215 59.5
Gorai.010G139600 Gossypium raimondii HOM05D006876 ORTHO05D008708 1.1e-64 250.8 226 58.8
Sc19g0007790 Simmondsia chinensis HOM05D006876 ORTHO05D008708 1.1e-64 250.8 203 59.6
EL10Ac3g07376 Beta vulgaris HOM05D006876 ORTHO05D008708 3.3e-64 249.2 226 56.6
Duzib114G0933 Durio zibethinus HOM05D006876 ORTHO05D008708 4.3e-64 248.8 224 58.5
Hund24486 Selenicereus undatus HOM05D006876 ORTHO05D008708 4.3e-64 248.8 233 54.1
Lalb_Chr24g0400801 Lupinus albus HOM05D006876 ORTHO05D008708 1.6e-63 246.9 202 61.4
TWI53G1364 Tripterygium wilfordii HOM05D006876 ORTHO05D008708 8.2e-63 244.6 207 58.5
Aa31LG10G11670 Aethionema arabicum HOM05D006876 ORTHO05D008708 1.1e-62 244.2 196 61.2
Lsat_1_v5_gn_6_24200 Lactuca sativa HOM05D006876 ORTHO05D008708 1.4e-62 243.8 258 51.2
Carub.0005s2355 Capsella rubella HOM05D006876 ORTHO05D008708 1.8e-62 243.4 201 59.2
AL5G38200 Arabidopsis lyrata HOM05D006876 ORTHO05D008708 4.1e-62 242.3 202 61.9
CANSAT78G2074 Cannabis sativa HOM05D006876 ORTHO05D008708 5.3e-62 241.9 195 60.5
Lj1g0024709 Lotus japonicus HOM05D006876 ORTHO05D008708 1.2e-61 240.7 200 60.5
Sp5g05770 Schrenkiella parvula HOM05D006876 ORTHO05D008708 1.2e-61 240.7 201 58.7
Thhalv10006232m.g Eutrema salsugineum HOM05D006876 ORTHO05D008708 1.5e-61 240.4 200 61.5
Phvul.001G101300 Phaseolus vulgaris HOM05D006876 ORTHO05D008708 1.5e-61 240.4 196 59.7
Eucgr.K01704 Eucalyptus grandis HOM05D006876 ORTHO05D008708 3.4e-61 239.2 198 61.6
CARHR166970 Cardamine hirsuta HOM05D006876 ORTHO05D008708 4.5e-61 238.8 200 60.0
COL.COLO4_21445 Corchorus olitorius HOM05D006876 ORTHO05D008708 5.9e-61 238.4 226 54.4
Glyma.03G003700 Glycine max HOM05D006876 ORTHO05D008708 7.7e-61 238.0 194 58.2
arahy.Tifrunner.gnm1.ann1.SXUX32 Arachis hypogaea HOM05D006876 ORTHO05D008708 1.3e-60 237.3 200 60.5
AT3G56820 Arabidopsis thaliana HOM05D006876 ORTHO05D008708 2.2e-60 236.5 203 59.6
BcaC07g40117 Brassica carinata HOM05D006876 ORTHO05D008708 2.2e-60 236.5 197 58.4
arahy.Tifrunner.gnm1.ann1.U8TZLL Arachis hypogaea HOM05D006876 ORTHO05D008708 5.0e-60 235.3 200 60.0
Glyma.19G122400 Glycine max HOM05D006876 ORTHO05D008708 5.0e-60 235.3 204 56.4
Medtr7g088040 Medicago truncatula HOM05D006876 ORTHO05D008708 6.5e-60 235.0 196 58.7
BcaC07g39992 Brassica carinata HOM05D006876 ORTHO05D008708 1.9e-59 233.4 204 56.4
AUR62020968 Chenopodium quinoa HOM05D006876 ORTHO05D008708 3.2e-59 232.6 203 59.1
A09p49640 Brassica napus HOM05D006876 ORTHO05D008708 4.2e-59 232.3 202 56.9
C08p32050 Brassica napus HOM05D006876 ORTHO05D008708 4.2e-59 232.3 204 56.4
BolC8t50823H Brassica oleracea HOM05D006876 ORTHO05D008708 4.2e-59 232.3 204 56.4
BraA09t40417Z Brassica rapa HOM05D006876 ORTHO05D008708 4.2e-59 232.3 202 56.9
VMungo1383G0045 Vigna mungo HOM05D006876 ORTHO05D008708 1.6e-58 230.3 216 53.7
Hund24492 Selenicereus undatus HOM05D006876 ORTHO05D008708 3.6e-58 229.2 202 57.4
Haze_20349 Corylus avellana HOM05D006876 ORTHO05D008708 2.0e-56 223.4 236 51.7
Aqoxy1G01501 Aquilegia oxysepala HOM05D006876 ORTHO05D008708 8.2e-55 218.0 190 57.9
arahy.Tifrunner.gnm1.ann1.R6YTNA Arachis hypogaea HOM05D006876 ORTHO05D008708 8.2e-55 218.0 196 56.6
Os01g0810200 Oryza sativa ssp. japonica HOM05D006876 ORTHO05D008708 2.6e-53 213.0 213 52.1
TAR623G1567 Trochodendron aralioides HOM05D006876 ORTHO05D008708 3.4e-53 212.6 149 69.1
Zm00001eb150270 Zea mays HOM05D006876 ORTHO05D008708 1.0e-52 211.1 214 51.4
Nn7g37203 Nelumbo nucifera HOM05D006876 ORTHO05D008708 8.5e-52 208.0 177 60.5
Oeu032953.2 Olea europaea HOM05D006876 ORTHO05D008708 1.8e-49 200.3 328 42.7
Aqoxy1G01505 Aquilegia oxysepala HOM05D006876 ORTHO05D008708 3.9e-49 199.1 130 67.7
ATR1096G134 Amborella trichopoda HOM05D006876 ORTHO05D008708 1.5e-48 197.2 207 47.3
Psat3g083640 Pisum sativum HOM05D006876 ORTHO05D008708 2.6e-45 186.4 135 63.0
Lj4A828G46 Lonicera japonica HOM05D006876 ORTHO05D008708 1.7e-44 183.7 110 75.5
Hma1.2p1_0694F.1_g204350 Hydrangea macrophylla HOM05D006876 ORTHO05D008708 5.0e-44 182.2 108 75.9
SEGI_40976 Sequoiadendron giganteum HOM05D006876 ORTHO05D008708 5.0e-44 182.2 141 58.2
DCAR_020618 Daucus carota HOM05D006876 ORTHO05D008708 1.9e-43 180.3 113 72.6
CSS0021314 Camellia sinensis var. sinensis HOM05D006876 ORTHO05D008708 4.0e-41 172.6 109 70.6
ECA233G0065 Erigeron canadensis HOM05D000444 ORTHO05D000489 2.6e-40 169.9 108 65.7
FvH4_1g29600 Fragaria vesca HOM05D006876 ORTHO05D008708 3.7e-39 166.0 133 63.2
Actinidia37859 Actinidia chinensis HOM05D006876 ORTHO05D008708 1.6e-34 150.6 87 77.0
QL05p001451 Quercus lobata HOM05D006876 ORTHO05D008708 1.5e-32 144.1 96 69.8
Lalb_Chr02g0157641 Lupinus albus HOM05D006876 ORTHO05D008708 2.0e-32 143.7 161 47.2
arahy.Tifrunner.gnm1.ann1.S4H51W Arachis hypogaea HOM05D006876 ORTHO05D008708 2.0e-29 133.7 128 53.1
arahy.Tifrunner.gnm1.ann1.QI3NWI Arachis hypogaea HOM05D006876 ORTHO05D008708 1.2e-21 107.8 77 64.9
CBR_g17867 Chara braunii HOM05D006876 ORTHO05D008708 2.0e-21 107.1 122 43.4
arahy.Tifrunner.gnm1.ann1.ERVJ4V Arachis hypogaea HOM05D006876 ORTHO05D008708 2.7e-21 106.7 178 36.5
arahy.Tifrunner.gnm1.ann1.8Z6XIB Arachis hypogaea HOM05D006876 ORTHO05D008708 5.9e-21 105.5 76 64.5
Oeu039192.1 Olea europaea HOM05D006876 ORTHO05D008708 5.9e-21 105.5 148 49.3
QL05p001731 Quercus lobata HOM05D006876 ORTHO05D008708 1.0e-20 104.8 68 70.6
QL05p085390 Quercus lobata HOM05D006876 ORTHO05D008708 1.0e-20 104.8 68 70.6
DCAR_020619 Daucus carota HOM05D006876 ORTHO05D008708 1.6e-18 97.4 110 50.0
Oeu007164.1 Olea europaea HOM05D006876 ORTHO05D008708 1.6e-18 97.4 72 62.5
Ca_08331_v3 Cicer arietinum L. HOM05D006876 ORTHO05D008708 6.1e-18 95.5 66 63.6
MCO02G060 Micromonas commoda HOM05D006876 ORTHO05D008708 7.0e-14 82.0 125 35.2
arahy.Tifrunner.gnm1.ann1.Q5BN79 Arachis hypogaea HOM05D006876 ORTHO05D008708 6.6e-12 75.5 58 63.8
Oeu013881.1 Olea europaea HOM05D006876 ORTHO05D008708 2.1e-10 70.5 103 42.7
Glyma.10G143650 Glycine max HOM05D006876 ORTHO05D008708 1.0e-09 68.2 44 63.6
C06p23790 Brassica napus HOM05D006876 ORTHO05D040197 3.4e-08 63.2 53 60.4
BolC6t37548H Brassica oleracea HOM05D006876 ORTHO05D040197 3.4e-08 63.2 53 60.4
HPP92_016900 Vanilla planifolia HOM05D006876 ORTHO05D008708 9.8e-08 61.6 96 37.5


User provided reference genes

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