Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g21120 Coffea canephora HOM05D000751 ORTHO05D005618 5.7e-86 320.9 160 100.0
Cc06_g22130 Coffea canephora HOM05D000751 ORTHO05D005618 8.3e-77 290.4 156 92.9
Sc06g0007900 Simmondsia chinensis HOM05D000751 ORTHO05D005618 1.4e-71 273.1 156 85.3
Actinidia06357 Actinidia chinensis HOM05D000751 ORTHO05D005618 2.3e-71 272.3 156 84.6
GSVIVG01010908001 Vitis vinifera HOM05D000751 ORTHO05D005618 8.9e-71 270.4 156 84.0
CSS0048015 Camellia sinensis var. sinensis HOM05D000751 ORTHO05D005618 2.6e-70 268.9 156 82.7
Eucgr.A01411 Eucalyptus grandis HOM05D000751 ORTHO05D005618 3.7e-69 265.0 156 82.1
vmacro08789 Vaccinium macrocarpon HOM05D000751 ORTHO05D005618 1.1e-68 263.5 156 82.1
Nn8g40996 Nelumbo nucifera HOM05D000751 ORTHO05D005618 1.9e-68 262.7 156 81.4
TAR636G3589 Trochodendron aralioides HOM05D000751 ORTHO05D005618 2.4e-68 262.3 156 80.8
Ciclev10030781m.g Citrus clementina HOM05D000751 ORTHO05D005618 5.4e-68 261.2 156 80.8
Atru.chr11.2504 Acer truncatum HOM05D000751 ORTHO05D005618 9.2e-68 260.4 156 80.1
Hma1.2p1_0207F.1_g087810 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 4.6e-67 258.1 154 80.5
Cfa016755 Carpinus fangiana HOM05D000751 ORTHO05D005618 1.3e-66 256.5 153 81.0
CiPaw.14G110300 Carya illinoinensis HOM05D000751 ORTHO05D005618 1.3e-66 256.5 156 80.8
ECA240G3678 Erigeron canadensis HOM05D000751 ORTHO05D005618 1.3e-66 256.5 156 78.8
Nitab4.5_0008918g0010 Nicotiana tabacum HOM05D000751 ORTHO05D005618 2.3e-66 255.8 156 80.8
Aqoxy2G02196 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 8.6e-66 253.8 155 78.1
EL10Ac2g02594 Beta vulgaris HOM05D000751 ORTHO05D005618 1.1e-65 253.4 154 79.2
EL10As14g24084 Beta vulgaris HOM05D000751 ORTHO05D005618 1.5e-65 253.1 154 79.2
Nitab4.5_0000074g0030 Nicotiana tabacum HOM05D000751 ORTHO05D005618 1.5e-65 253.1 156 80.8
Aqoxy2G02322 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 1.9e-65 252.7 155 78.1
Thecc.09G180200 Theobroma cacao HOM05D000751 ORTHO05D005618 5.6e-65 251.1 156 79.5
Sed0012322 Sechium edule HOM05D000751 ORTHO05D005618 4.7e-64 248.1 156 76.3
CANSAT11G2085 Cannabis sativa HOM05D000751 ORTHO05D005618 6.2e-64 247.7 156 75.6
Lj6g0015551 Lotus japonicus HOM05D000751 ORTHO05D005618 1.1e-63 246.9 155 75.5
MELO3C017440.2 Cucumis melo HOM05D000751 ORTHO05D005618 1.8e-63 246.1 156 76.9
Lalb_Chr02g0148081 Lupinus albus HOM05D000751 ORTHO05D005618 2.3e-63 245.7 155 75.5
Duzib168G1036 Durio zibethinus HOM05D000751 ORTHO05D005618 4.0e-63 245.0 156 77.6
Gohir.D05G003900 Gossypium hirsutum HOM05D000751 ORTHO05D005618 4.0e-63 245.0 156 76.9
Gorai.009G003500 Gossypium raimondii HOM05D000751 ORTHO05D005618 6.8e-63 244.2 156 76.9
Hund24686 Selenicereus undatus HOM05D000751 ORTHO05D005618 6.8e-63 244.2 191 65.4
VMungo1309G0231 Vigna mungo HOM05D000751 ORTHO05D005618 8.9e-63 243.8 155 74.2
PSO017G1776 Papaver somniferum HOM05D000751 ORTHO05D005618 1.5e-62 243.0 156 72.4
PSO478G0715 Papaver somniferum HOM05D000751 ORTHO05D005618 1.5e-62 243.0 156 72.4
CsaV3_1G031770 Cucumis sativus L. HOM05D000751 ORTHO05D005618 4.4e-62 241.5 156 75.6
Glyma.09G057700 Glycine max HOM05D000751 ORTHO05D005618 4.4e-62 241.5 155 72.9
Gohir.A05G003500 Gossypium hirsutum HOM05D000751 ORTHO05D005618 1.7e-61 239.6 156 74.4
Phvul.009G238100 Phaseolus vulgaris HOM05D000751 ORTHO05D005618 1.7e-61 239.6 155 72.9
Manes.17G002500 Manihot esculenta HOM05D000751 ORTHO05D005618 2.2e-61 239.2 156 71.8
SEGI_35111 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 3.7e-61 238.4 155 72.9
arahy.Tifrunner.gnm1.ann1.QPM7FK Arachis hypogaea HOM05D000751 ORTHO05D005618 6.4e-61 237.7 155 71.0
Cpa.g.sc86.27 Carica papaya HOM05D000751 ORTHO05D005618 6.4e-61 237.7 154 75.3
MD13G1251200 Malus domestica HOM05D000751 ORTHO05D005618 6.4e-61 237.7 149 75.8
THA.LOC104813512 Tarenaya hassleriana HOM05D000751 ORTHO05D005618 1.1e-60 236.9 157 74.5
FvH4_4g07640 Fragaria vesca HOM05D000751 ORTHO05D005618 5.4e-60 234.6 156 73.1
FAN12G3496 Fragaria x ananassa HOM05D000751 ORTHO05D005618 5.4e-60 234.6 156 73.1
RcHm_v2.0_Chr4g0400251 Rosa chinensis HOM05D000751 ORTHO05D005618 5.4e-60 234.6 156 71.2
Peaxi162Scf00324g00731 Petunia axillaris HOM05D000751 ORTHO05D005618 9.2e-60 233.8 138 81.9
SEGI_01124 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 1.2e-59 233.4 160 70.0
TWI38G2172 Tripterygium wilfordii HOM05D000751 ORTHO05D005618 1.6e-59 233.0 156 73.7
TPR.G9024 Trifolium pratense HOM05D000751 ORTHO05D005618 2.1e-59 232.6 157 71.3
Aa31LG7G2520 Aethionema arabicum HOM05D000751 ORTHO05D005618 2.3e-58 229.2 156 73.1
Potri.003G010000 Populus trichocarpa HOM05D000751 ORTHO05D005618 3.0e-58 228.8 156 69.2
CARHR018290 Cardamine hirsuta HOM05D000751 ORTHO05D005618 5.1e-58 228.0 157 72.0
C08p18130 Brassica napus HOM05D000751 ORTHO05D005618 1.5e-57 226.5 157 68.8
BolC8t49447H Brassica oleracea HOM05D000751 ORTHO05D005618 1.5e-57 226.5 157 68.8
Carub.0001s1742 Capsella rubella HOM05D000751 ORTHO05D005618 1.5e-57 226.5 157 72.0
Migut.L01901 Erythranthe guttata HOM05D000751 ORTHO05D005618 1.5e-57 226.5 156 70.5
Thhalv10006892m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 1.5e-57 226.5 156 68.6
A08p30790 Brassica napus HOM05D000751 ORTHO05D005618 3.3e-57 225.3 157 68.2
BraA08t35010Z Brassica rapa HOM05D000751 ORTHO05D005618 3.3e-57 225.3 157 68.2
HanXRQChr03g0068331 Helianthus annuus HOM05D000751 ORTHO05D005618 5.6e-57 224.6 156 67.9
arahy.Tifrunner.gnm1.ann1.EK4LKE Arachis hypogaea HOM05D000751 ORTHO05D005618 9.5e-57 223.8 148 73.0
MSTRG.26530 Avicennia marina HOM05D000751 ORTHO05D005618 9.5e-57 223.8 156 70.5
Prupe.1G079600 Prunus persica HOM05D000751 ORTHO05D005618 9.5e-57 223.8 154 72.1
SGA_v2.0_scaffold595G53113 Striga asiatica HOM05D000751 ORTHO05D005618 1.6e-56 223.0 156 69.9
AT1G17690 Arabidopsis thaliana HOM05D000751 ORTHO05D005618 2.1e-56 222.6 157 70.1
MBI16_g18209_MAGBIO Magnolia biondii HOM05D000751 ORTHO05D000889 2.8e-56 222.2 156 71.8
HPP92_003076 Vanilla planifolia HOM05D000751 ORTHO05D005618 8.1e-56 220.7 156 69.2
DCAR_007397 Daucus carota HOM05D000751 ORTHO05D005618 1.8e-55 219.5 132 81.8
AL1G30040 Arabidopsis lyrata HOM05D000751 ORTHO05D005618 5.2e-55 218.0 157 68.2
HPP92_028565 Vanilla planifolia HOM05D000751 ORTHO05D005618 2.0e-54 216.1 135 75.6
Medtr2g036890 Medicago truncatula HOM05D000751 ORTHO05D005618 2.6e-54 215.7 159 65.4
Zm00001eb406370 Zea mays HOM05D000751 ORTHO05D005618 9.9e-54 213.8 156 62.2
CBR_g38171 Chara braunii HOM05D000751 ORTHO05D005618 1.3e-53 213.4 155 62.6
AagrBONN_evm.TU.Sc2ySwM_369.592 Anthoceros agrestis HOM05D000751 ORTHO05D005618 3.7e-53 211.8 159 64.2
CDE02G3188 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 3.7e-53 211.8 156 66.0
ClCG06G013510 Citrullus lanatus HOM05D000751 ORTHO05D005618 3.7e-53 211.8 136 76.5
SMO296G0020 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 8.3e-53 210.7 154 61.7
Mapoly0074s0025 Marchantia polymorpha HOM05D000751 ORTHO05D005618 1.9e-52 209.5 153 62.7
CDE06G1960 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 2.4e-52 209.1 131 73.3
Lsat_1_v5_gn_7_56501 Lactuca sativa HOM05D000751 ORTHO05D005618 2.4e-52 209.1 156 67.3
Os05g0295100 Oryza sativa ssp. japonica HOM05D000751 ORTHO05D005618 5.4e-52 208.0 154 61.0
Thhalv10023137m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 1.0e-50 203.8 154 63.6
FAN07G1720 Fragaria x ananassa HOM05D000751 ORTHO05D005618 2.3e-50 202.6 155 66.5
SalBow6G2294 Salvia bowleyana HOM05D000751 ORTHO05D005618 4.3e-49 198.4 191 56.0
Pp3c10_17670 Physcomitrium patens HOM05D000751 ORTHO05D005618 5.6e-49 198.0 154 65.6
Medtr2g012650 Medicago truncatula HOM05D000751 ORTHO05D005618 9.5e-49 197.2 155 63.2
Sp4g05240 Schrenkiella parvula HOM05D000751 ORTHO05D005618 1.4e-47 193.4 147 61.9
ATR0626G151 Amborella trichopoda HOM05D000751 ORTHO05D005618 1.9e-44 183.0 131 64.9
SalBow1G4534 Salvia bowleyana HOM05D000751 ORTHO05D005618 1.1e-41 173.7 156 58.3
Carub.0003s1065 Capsella rubella HOM05D000751 ORTHO05D005618 1.9e-41 172.9 154 54.5
SalBow6G0847 Salvia bowleyana HOM05D000751 ORTHO05D005618 3.3e-41 172.2 156 57.7
unitig_8.g3549 Utricularia gibba HOM05D000751 ORTHO05D005618 8.1e-40 167.5 156 56.4
Cc06_g21130 Coffea canephora HOM05D000751 ORTHO05D005618 3.1e-39 165.6 89 88.8
Cc10_g11360 Coffea canephora HOM05D000751 ORTHO05D005618 3.1e-39 165.6 87 90.8
FAN17G2112 Fragaria x ananassa HOM05D000751 ORTHO05D005618 3.1e-39 165.6 105 75.2
arahy.Tifrunner.gnm1.ann1.4Y102Q Arachis hypogaea HOM05D000751 ORTHO05D005618 5.3e-39 164.9 130 60.8
COL.COLO4_25459 Corchorus olitorius HOM05D000751 ORTHO05D005618 9.9e-38 160.6 118 70.3
Cre04.g218300 Chlamydomonas reinhardtii HOM05D000751 ORTHO05D005618 9.3e-36 154.1 173 41.6
Nn2g10857 Nelumbo nucifera HOM05D000751 ORTHO05D005618 2.1e-35 152.9 84 85.7
Aqoxy3G01439 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 6.0e-35 151.4 92 79.3
Sopen07g005110 Solanum pennellii HOM05D000751 ORTHO05D005618 1.5e-33 146.7 91 74.7
CAN.G266.4 Capsicum annuum HOM05D000751 ORTHO05D005618 4.3e-33 145.2 87 78.2
Psat4g182280 Pisum sativum HOM05D000751 ORTHO05D005618 1.7e-29 133.3 83 73.5
Medtr8g466490 Medicago truncatula HOM05D000751 ORTHO05D005618 3.2e-28 129.0 133 48.1
CAN.G101.3 Capsicum annuum HOM05D000751 ORTHO05D005618 4.6e-27 125.2 105 62.9
Oeu047314.3 Olea europaea HOM05D000751 ORTHO05D005618 6.0e-27 124.8 130 53.8
Rhsim01G0197100 Rhododendron simsii HOM05D000751 ORTHO05D005618 6.0e-27 124.8 70 84.3
MCO16G456 Micromonas commoda HOM05D000751 ORTHO05D005618 2.1e-24 116.3 159 36.5
Sopen07g005100 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-23 113.6 70 78.6
AUR62014975 Chenopodium quinoa HOM05D000751 ORTHO05D005618 5.3e-23 111.7 70 77.1
Gorai.003G081200 Gossypium raimondii HOM05D000751 ORTHO05D005618 6.9e-23 111.3 70 77.1
DCAR_007396 Daucus carota HOM05D000751 ORTHO05D005618 2.2e-21 106.3 90 56.7
Cfa022413 Carpinus fangiana HOM05D000751 ORTHO05D005618 1.3e-18 97.1 143 37.1
PRCOL_00003641 Prasinoderma coloniale HOM05D000751 ORTHO05D005618 5.6e-17 91.7 138 34.8
SMO174G0270 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 1.7e-13 80.1 69 50.7
Aqoxy1G02674 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 4.2e-12 75.5 55 63.6
SalBow6G6994 Salvia bowleyana HOM05D000751 ORTHO05D005618 1.5e-09 67.0 48 62.5
Glyma.15G163800 Glycine max HOM05D000751 ORTHO05D005618 3.3e-09 65.9 51 60.8
MD13G1245100 Malus domestica HOM05D000751 ORTHO05D005618 4.8e-08 62.0 104 38.5
BolC2t08163H Brassica oleracea HOM05D000751 ORTHO05D005618 1.0e-05 54.3 51 45.1


User provided reference genes

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