Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g21050 Coffea canephora HOM05D000457 ORTHO05D000560 1.8e-78 295.8 147 100.0
Cc02_g36770 Coffea canephora HOM05D000457 ORTHO05D000560 2.1e-50 202.6 144 72.2
Rhsim10G0099300 Rhododendron simsii HOM05D000457 ORTHO05D000560 8.2e-31 137.5 117 59.0
vmacro19811 Vaccinium macrocarpon HOM05D000457 ORTHO05D000560 2.0e-29 132.9 101 62.4
Dinv30977 Davidia involucrata HOM05D000457 ORTHO05D000560 2.7e-29 132.5 101 67.3
Atru.chr6.28 Acer truncatum HOM05D000457 ORTHO05D000560 1.3e-28 130.2 114 57.0
Oeu016664.1 Olea europaea HOM05D000457 ORTHO05D000560 1.3e-28 130.2 102 63.7
THA.LOC104800318 Tarenaya hassleriana HOM05D000457 ORTHO05D000560 1.3e-28 130.2 101 63.4
MSTRG.20345 Avicennia marina HOM05D000457 ORTHO05D000560 1.7e-28 129.8 101 58.4
Lalb_Chr20g0119821 Lupinus albus HOM05D000457 ORTHO05D000560 8.5e-28 127.5 101 59.4
Lj5A309T28 Lonicera japonica HOM05D000457 ORTHO05D000560 1.5e-27 126.7 101 62.4
Ciclev10000235m.g Citrus clementina HOM05D000457 ORTHO05D000560 2.5e-27 125.9 101 61.4
MD15G1140500 Malus domestica HOM05D000457 ORTHO05D000560 2.5e-27 125.9 101 59.4
GSVIVG01023105001 Vitis vinifera HOM05D000457 ORTHO05D000560 5.5e-27 124.8 102 62.7
COL.COLO4_06788 Corchorus olitorius HOM05D000457 ORTHO05D000560 9.4e-27 124.0 101 62.4
FvH4_5g27150 Fragaria vesca HOM05D000457 ORTHO05D000560 9.4e-27 124.0 102 60.8
FAN08G0526 Fragaria x ananassa HOM05D000457 ORTHO05D000560 9.4e-27 124.0 102 60.8
FAN13G2432 Fragaria x ananassa HOM05D000457 ORTHO05D000560 9.4e-27 124.0 102 60.8
QL02p104109 Quercus lobata HOM05D000457 ORTHO05D000560 9.4e-27 124.0 101 58.4
Prupe.1G587800 Prunus persica HOM05D000457 ORTHO05D000560 1.2e-26 123.6 101 61.4
Rhsim05G0110400 Rhododendron simsii HOM05D000457 ORTHO05D000560 1.6e-26 123.2 103 61.2
TWI59G1411 Tripterygium wilfordii HOM05D000457 ORTHO05D000560 1.6e-26 123.2 101 62.4
arahy.Tifrunner.gnm1.ann1.ALC201 Arachis hypogaea HOM05D000457 ORTHO05D000560 2.1e-26 122.9 100 58.0
Duzib114G0620 Durio zibethinus HOM05D000457 ORTHO05D000560 2.7e-26 122.5 101 61.4
Cfa004411 Carpinus fangiana HOM05D000457 ORTHO05D000560 4.7e-26 121.7 101 58.4
DCAR_022318 Daucus carota HOM05D000457 ORTHO05D000560 6.1e-26 121.3 115 55.7
Nitab4.5_0004090g0120 Nicotiana tabacum HOM05D000457 ORTHO05D000560 6.1e-26 121.3 101 59.4
Actinidia01649 Actinidia chinensis HOM05D000457 ORTHO05D000560 8.0e-26 120.9 101 59.4
Medtr2g028530 Medicago truncatula HOM05D000457 ORTHO05D000560 8.0e-26 120.9 113 54.0
RcHm_v2.0_Chr7g0218171 Rosa chinensis HOM05D000457 ORTHO05D000560 8.0e-26 120.9 100 59.0
Ca_11365_v3 Cicer arietinum L. HOM05D000457 ORTHO05D000560 1.0e-25 120.6 100 59.0
Thecc.10G064400 Theobroma cacao HOM05D000457 ORTHO05D000560 1.4e-25 120.2 101 59.4
Migut.B00686 Erythranthe guttata HOM05D000457 ORTHO05D000560 1.8e-25 119.8 100 56.0
Sp6g11000 Schrenkiella parvula HOM05D000457 ORTHO05D000560 2.3e-25 119.4 115 53.0
CiPaw.12G009700 Carya illinoinensis HOM05D000457 ORTHO05D000560 3.0e-25 119.0 101 57.4
Manes.06G016725 Manihot esculenta HOM05D000457 ORTHO05D000560 4.0e-25 118.6 101 60.4
vmacro19809 Vaccinium macrocarpon HOM05D000457 ORTHO05D000560 4.0e-25 118.6 101 59.4
COL.COLO4_06789 Corchorus olitorius HOM05D000457 ORTHO05D000560 1.2e-24 117.1 101 58.4
Manes.06G016800 Manihot esculenta HOM05D000457 ORTHO05D000560 1.2e-24 117.1 101 59.4
arahy.Tifrunner.gnm1.ann1.HUI7W7 Arachis hypogaea HOM05D000457 ORTHO05D000560 1.5e-24 116.7 98 56.1
TAR626G0432 Trochodendron aralioides HOM05D000457 ORTHO05D000560 1.5e-24 116.7 101 56.4
CARHR259040 Cardamine hirsuta HOM05D000457 ORTHO05D000560 2.0e-24 116.3 136 47.1
Carub.0008s0961 Capsella rubella HOM05D000457 ORTHO05D000560 3.4e-24 115.5 115 52.2
Glyma.15G124700 Glycine max HOM05D000457 ORTHO05D000560 3.4e-24 115.5 100 56.0
Gohir.A10G208200 Gossypium hirsutum HOM05D000457 ORTHO05D000560 3.4e-24 115.5 100 61.0
HanXRQChr14g0440361 Helianthus annuus HOM05D000457 ORTHO05D000560 3.4e-24 115.5 100 56.0
Thhalv10012839m.g Eutrema salsugineum HOM05D000457 ORTHO05D000560 5.7e-24 114.8 115 50.4
AL8G23670 Arabidopsis lyrata HOM05D000457 ORTHO05D000560 7.5e-24 114.4 115 51.3
Glyma.09G018600 Glycine max HOM05D000457 ORTHO05D000560 7.5e-24 114.4 100 55.0
Nitab4.5_0004176g0050 Nicotiana tabacum HOM05D000457 ORTHO05D000560 7.5e-24 114.4 101 53.5
CiPaw.05G000200 Carya illinoinensis HOM05D000457 ORTHO05D000560 9.8e-24 114.0 123 50.4
Psat1g170720 Pisum sativum HOM05D000457 ORTHO05D000560 9.8e-24 114.0 101 55.4
A10p08720 Brassica napus HOM05D000457 ORTHO05D000560 1.3e-23 113.6 132 47.0
BraSC37t46130Z Brassica rapa HOM05D000457 ORTHO05D000560 1.3e-23 113.6 132 47.0
Nitab4.5_0004176g0030 Nicotiana tabacum HOM05D000457 ORTHO05D000560 1.3e-23 113.6 101 55.4
AT5G49740 Arabidopsis thaliana HOM05D000457 ORTHO05D000560 1.7e-23 113.2 115 50.4
BcaC04g20829 Brassica carinata HOM05D000457 ORTHO05D000560 1.7e-23 113.2 101 55.4
C09p38720 Brassica napus HOM05D000457 ORTHO05D000560 1.7e-23 113.2 101 55.4
BolC9t56727H Brassica oleracea HOM05D000457 ORTHO05D000560 1.7e-23 113.2 101 55.4
FAN18G0649 Fragaria x ananassa HOM05D000457 ORTHO05D000560 1.7e-23 113.2 102 56.9
Gohir.D10G216500 Gossypium hirsutum HOM05D000457 ORTHO05D000560 2.2e-23 112.8 100 60.0
Gorai.011G242100 Gossypium raimondii HOM05D000457 ORTHO05D000560 2.2e-23 112.8 100 60.0
BcaB08g35344 Brassica carinata HOM05D000457 ORTHO05D000560 2.8e-23 112.5 113 51.3
QL02p103996 Quercus lobata HOM05D000457 ORTHO05D000560 2.8e-23 112.5 101 51.5
TWI59G0951 Tripterygium wilfordii HOM05D000457 ORTHO05D000560 2.8e-23 112.5 101 59.4
Aa31sc75G60 Aethionema arabicum HOM05D000457 ORTHO05D000560 4.8e-23 111.7 100 54.0
MD08G1250800 Malus domestica HOM05D000457 ORTHO05D000560 4.8e-23 111.7 143 46.9
Haze_09946 Corylus avellana HOM05D000457 ORTHO05D000560 6.3e-23 111.3 113 50.4
CAN.G1379.26 Capsicum annuum HOM05D000457 ORTHO05D000560 8.3e-23 110.9 101 55.4
QL10p023888 Quercus lobata HOM05D000457 ORTHO05D000560 8.3e-23 110.9 101 51.5
AUR62032510 Chenopodium quinoa HOM05D000457 ORTHO05D000560 1.8e-22 109.8 114 50.9
Eucgr.I01139 Eucalyptus grandis HOM05D000457 ORTHO05D000560 2.4e-22 109.4 99 53.5
Peaxi162Scf00194g00817 Petunia axillaris HOM05D000457 ORTHO05D000560 2.4e-22 109.4 101 54.5
CiPaw.05G000100 Carya illinoinensis HOM05D000457 ORTHO05D000560 3.1e-22 109.0 123 48.8
DCAR_001876 Daucus carota HOM05D000457 ORTHO05D000560 3.1e-22 109.0 100 56.0
Lsat_1_v5_gn_9_81901 Lactuca sativa HOM05D000457 ORTHO05D000560 4.1e-22 108.6 113 50.4
Cfa004735 Carpinus fangiana HOM05D000457 ORTHO05D000560 5.4e-22 108.2 115 49.6
Lj6g0019314 Lotus japonicus HOM05D000457 ORTHO05D000560 5.4e-22 108.2 113 51.3
PGSC0003DMG401018223 Solanum tuberosum HOM05D000457 ORTHO05D000560 9.1e-22 107.5 101 53.5
Cfa004410 Carpinus fangiana HOM05D000457 ORTHO05D000560 1.2e-21 107.1 113 48.7
MBI03_g28959_MAGBIO Magnolia biondii HOM05D000457 ORTHO05D000560 1.2e-21 107.1 101 52.5
PGR142G3572 Punica granatum HOM05D000457 ORTHO05D000560 1.2e-21 107.1 104 52.9
Solyc01g102610.3 Solanum lycopersicum HOM05D000457 ORTHO05D000560 1.6e-21 106.7 101 55.4
PGR142G1709 Punica granatum HOM05D000457 ORTHO05D000560 2.0e-21 106.3 119 46.2
PGR142G2765 Punica granatum HOM05D000457 ORTHO05D000560 2.0e-21 106.3 100 55.0
Rhsim05G0110600 Rhododendron simsii HOM05D000457 ORTHO05D000560 2.0e-21 106.3 149 43.6
ECA240G2196 Erigeron canadensis HOM05D000457 ORTHO05D000560 3.5e-21 105.5 111 50.5
Sopen01g045020 Solanum pennellii HOM05D000457 ORTHO05D000560 3.5e-21 105.5 101 54.5
CANSAT01G0014 Cannabis sativa HOM05D000457 ORTHO05D000560 4.5e-21 105.1 100 55.0
HanXRQChr00c0020g0571101 Helianthus annuus HOM05D000457 ORTHO05D000560 4.5e-21 105.1 131 48.9
Cfa004732 Carpinus fangiana HOM05D000457 ORTHO05D000560 7.7e-21 104.4 98 54.1
ECA236G4330 Erigeron canadensis HOM05D000457 ORTHO05D000560 7.7e-21 104.4 115 47.8
Peaxi162Scf00194g00728 Petunia axillaris HOM05D000457 ORTHO05D000560 7.7e-21 104.4 101 51.5
QL02p104068 Quercus lobata HOM05D000457 ORTHO05D000560 7.7e-21 104.4 115 47.8
FvH4_5g27140 Fragaria vesca HOM05D000457 ORTHO05D000560 1.0e-20 104.0 113 47.8
FAN18G2270 Fragaria x ananassa HOM05D000457 ORTHO05D000560 1.0e-20 104.0 113 47.8
Sabra01G0056600 Salix brachista HOM05D000457 ORTHO05D000560 1.0e-20 104.0 109 51.4
FAN08G2989 Fragaria x ananassa HOM05D000457 ORTHO05D000560 1.3e-20 103.6 113 47.8
VMungo0540G0366 Vigna mungo HOM05D000457 ORTHO05D000560 1.7e-20 103.2 100 50.0
CSS0014734 Camellia sinensis var. sinensis HOM05D000457 ORTHO05D000560 2.3e-20 102.8 102 53.9
Potri.001G079000 Populus trichocarpa HOM05D000457 ORTHO05D000560 3.8e-20 102.1 111 50.5
AT5G49730 Arabidopsis thaliana HOM05D000457 ORTHO05D000560 5.0e-20 101.7 138 44.2
FAN13G3293 Fragaria x ananassa HOM05D000457 ORTHO05D000560 5.0e-20 101.7 113 46.9
Cfa005110 Carpinus fangiana HOM05D000457 ORTHO05D000560 6.6e-20 101.3 110 50.9
Dinv24541 Davidia involucrata HOM05D000457 ORTHO05D000560 6.6e-20 101.3 102 52.9
Cfa005551 Carpinus fangiana HOM05D000457 ORTHO05D000560 8.6e-20 100.9 110 50.9
Eucgr.I01143 Eucalyptus grandis HOM05D000457 ORTHO05D000560 8.6e-20 100.9 99 50.5
PSO017G6043 Papaver somniferum HOM05D000457 ORTHO05D000560 8.6e-20 100.9 101 49.5
Phvul.006G133600 Phaseolus vulgaris HOM05D000457 ORTHO05D000560 1.1e-19 100.5 100 49.0
PGR142G2562 Punica granatum HOM05D000457 ORTHO05D000560 1.5e-19 100.1 127 44.1
AL8G23660 Arabidopsis lyrata HOM05D000457 ORTHO05D000560 2.5e-19 99.4 116 49.1
EL10Ac6g13935 Beta vulgaris HOM05D000457 ORTHO05D000560 2.5e-19 99.4 101 49.5
Cpa.g.sc17.26 Carica papaya HOM05D000457 ORTHO05D000560 2.5e-19 99.4 100 54.0
PSO170G2371 Papaver somniferum HOM05D000457 ORTHO05D000560 2.5e-19 99.4 113 46.9
MELO3C016426.2 Cucumis melo HOM05D000457 ORTHO05D000560 3.3e-19 99.0 100 49.0
SGA_v2.0_scaffold254G45213 Striga asiatica HOM05D000457 ORTHO05D000560 3.3e-19 99.0 111 48.6
RcHm_v2.0_Chr7g0218141 Rosa chinensis HOM05D000457 ORTHO05D000560 4.2e-19 98.6 147 41.5
Zm00001eb081810 Zea mays HOM05D000457 ORTHO05D000560 9.5e-19 97.4 111 49.5
Dinv24548 Davidia involucrata HOM05D000457 ORTHO05D000560 1.6e-18 96.7 102 50.0
PGR102G1669 Punica granatum HOM05D000457 ORTHO05D000560 1.6e-18 96.7 126 38.9
AUR62042817 Chenopodium quinoa HOM05D000457 ORTHO05D000560 2.1e-18 96.3 84 56.0
CsaV3_3G006820 Cucumis sativus L. HOM05D000457 ORTHO05D000560 6.1e-18 94.7 100 46.0
Atru.chr6.30 Acer truncatum HOM05D000457 ORTHO05D000560 8.0e-18 94.4 107 50.5
Lsat_1_v5_gn_7_54801 Lactuca sativa HOM05D000457 ORTHO05D000560 8.0e-18 94.4 111 50.5
RcHm_v2.0_Chr7g0218161 Rosa chinensis HOM05D000457 ORTHO05D000560 1.0e-17 94.0 128 42.2
ClCG10G007690 Citrullus lanatus HOM05D000457 ORTHO05D000560 1.8e-17 93.2 104 47.1
Eucgr.I01142 Eucalyptus grandis HOM05D000457 ORTHO05D000560 3.0e-17 92.4 100 46.0
Aqoxy6G00006 Aquilegia oxysepala HOM05D000457 ORTHO05D000560 4.0e-17 92.0 119 43.7
Dinv24542 Davidia involucrata HOM05D000457 ORTHO05D000560 4.0e-17 92.0 102 50.0
CDE08G0417 Ceratophyllum demersum HOM05D000457 ORTHO05D000560 8.9e-17 90.9 102 43.1
Hund23749 Selenicereus undatus HOM05D000457 ORTHO05D000560 1.2e-16 90.5 101 46.5
Eucgr.I01144 Eucalyptus grandis HOM05D000457 ORTHO05D000560 1.5e-16 90.1 89 51.7
Peaxi162Scf00071g00030 Petunia axillaris HOM05D000457 ORTHO05D000560 1.5e-16 90.1 80 58.8
Os04g0444800 Oryza sativa ssp. japonica HOM05D000457 ORTHO05D000560 4.4e-16 88.6 111 45.9
MBI19_g20764_MAGBIO Magnolia biondii HOM05D000457 ORTHO05D000560 5.7e-16 88.2 115 43.5
Sed0027163 Sechium edule HOM05D000457 ORTHO05D000560 5.7e-16 88.2 103 46.6
CDE02G3687 Ceratophyllum demersum HOM05D000457 ORTHO05D000560 4.9e-15 85.1 102 43.1
Sabra01G0056400 Salix brachista HOM05D000457 ORTHO05D000560 6.3e-15 84.7 68 64.7
HPP92_011444 Vanilla planifolia HOM05D000457 ORTHO05D000560 1.1e-14 84.0 81 53.1
ATR1089G123 Amborella trichopoda HOM05D000457 ORTHO05D000560 1.8e-14 83.2 103 42.7
QL04p018484 Quercus lobata HOM05D000457 ORTHO05D000560 5.4e-14 81.6 64 62.5
Eucgr.B03992 Eucalyptus grandis HOM05D000457 ORTHO05D000560 2.3e-12 76.3 94 43.6
SEGI_39283 Sequoiadendron giganteum HOM05D000457 ORTHO05D000560 2.9e-12 75.9 97 47.4
TPR.G17525 Trifolium pratense HOM05D000457 ORTHO05D000560 1.5e-11 73.6 78 48.7
Peaxi162Scf00194g00818 Petunia axillaris HOM05D000457 ORTHO05D000560 3.3e-11 72.4 59 62.7
QL04p018402 Quercus lobata HOM05D000457 ORTHO05D000560 6.1e-10 68.2 105 39.0
SEGI_31396 Sequoiadendron giganteum HOM05D000457 ORTHO05D000560 8.0e-10 67.8 114 36.0
SEGI_11146 Sequoiadendron giganteum HOM05D000457 ORTHO05D000560 5.2e-09 65.1 70 52.9
SEGI_29329 Sequoiadendron giganteum HOM05D000457 ORTHO05D000560 6.8e-09 64.7 70 52.9
Nitab4.5_0012023g0010 Nicotiana tabacum HOM05D000457 ORTHO05D000560 7.5e-08 61.2 50 62.0
Sc03g0005550 Simmondsia chinensis HOM05D000457 ORTHO05D000560 7.5e-08 61.2 35 77.1
Mapoly0193s0015 Marchantia polymorpha HOM05D000457 ORTHO05D000560 9.8e-08 60.8 100 29.0
AagrBONN_evm.TU.Sc2ySwM_344.3655 Anthoceros agrestis HOM05D000457 ORTHO05D000560 1.3e-07 60.5 73 43.8
Mapoly2108s0001 Marchantia polymorpha HOM05D000457 ORTHO05D000560 1.7e-07 60.1 100 28.0
AagrBONN_evm.TU.Sc2ySwM_117.2054 Anthoceros agrestis HOM05D000457 ORTHO05D000560 3.7e-07 58.9 109 31.2
SEGI_01803 Sequoiadendron giganteum HOM05D000457 ORTHO05D000560 3.7e-07 58.9 103 33.0
TPR.G17487 Trifolium pratense HOM05D000457 ORTHO05D000560 3.7e-07 58.9 35 68.6
Cpa.g.sc107.99 Carica papaya HOM05D000457 ORTHO05D000560 1.1e-06 57.4 82 35.4
TPR.G23244 Trifolium pratense HOM05D000457 ORTHO05D000560 1.4e-06 57.0 35 65.7
Hma1.2p1_0274F.1_g110230 Hydrangea macrophylla HOM05D000457 ORTHO05D000560 1.9e-06 56.6 113 31.0
Eucgr.E00107 Eucalyptus grandis HOM05D000457 ORTHO05D000560 4.1e-06 55.5 78 35.9
Dinv24547 Davidia involucrata HOM05D000457 ORTHO05D000560 9.2e-06 54.3 70 40.0


User provided reference genes

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