Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g20610 Coffea canephora HOM05D007678 ORTHO05D009658 7.6e-53 210.3 111 100.0
Oeu044217.3 Olea europaea HOM05D007678 ORTHO05D009658 1.7e-28 129.4 89 68.5
Dinv31528 Davidia involucrata HOM05D007678 ORTHO05D009658 3.8e-28 128.3 85 74.1
ECA248G0545 Erigeron canadensis HOM05D007678 ORTHO05D009658 1.1e-27 126.7 85 68.2
Lsat_1_v5_gn_7_114920 Lactuca sativa HOM05D007678 ORTHO05D009658 1.1e-27 126.7 85 75.3
Peaxi162Scf00153g00057 Petunia axillaris HOM05D007678 ORTHO05D009658 3.2e-27 125.2 85 69.4
Solyc10g081280.2 Solanum lycopersicum HOM05D007678 ORTHO05D009658 1.2e-26 123.2 87 66.7
Atru.chr2.1713_Atru.chr2.1714 Acer truncatum HOM05D007678 ORTHO05D009658 1.6e-26 122.9 85 70.6
Sabra01G0023800 Salix brachista HOM05D007678 ORTHO05D009658 2.7e-26 122.1 85 69.4
Sopen10g031780 Solanum pennellii HOM05D007678 ORTHO05D009658 2.7e-26 122.1 87 65.5
Nn7g37012 Nelumbo nucifera HOM05D007678 ORTHO05D009658 3.5e-26 121.7 85 68.2
Potri.001G033500 Populus trichocarpa HOM05D007678 ORTHO05D009658 4.6e-26 121.3 85 69.4
Prupe.2G048500 Prunus persica HOM05D007678 ORTHO05D009658 4.6e-26 121.3 85 69.4
TAR623G0324 Trochodendron aralioides HOM05D007678 ORTHO05D009658 4.6e-26 121.3 84 70.2
SalBow6G2419 Salvia bowleyana HOM05D007678 ORTHO05D009658 6.0e-26 120.9 90 64.4
PGSC0003DMG401028118 Solanum tuberosum HOM05D007678 ORTHO05D009658 6.0e-26 120.9 87 65.5
FAN06G1516 Fragaria x ananassa HOM05D007678 ORTHO05D009658 7.9e-26 120.6 88 68.2
CAN.G128.118 Capsicum annuum HOM05D001269 ORTHO05D001083 1.3e-25 119.8 84 67.9
MELO3C034052.2 Cucumis melo HOM05D007678 ORTHO05D009658 1.3e-25 119.8 84 67.9
MD02G1272300 Malus domestica HOM05D007678 ORTHO05D009658 1.3e-25 119.8 85 68.2
Actinidia01693 Actinidia chinensis HOM05D007678 ORTHO05D009658 2.3e-25 119.0 85 68.2
RcHm_v2.0_Chr1g0328821 Rosa chinensis HOM05D007678 ORTHO05D009658 3.0e-25 118.6 85 67.1
Sed0019894 Sechium edule HOM05D000001 ORTHO05D000003 3.0e-25 118.6 84 67.9
Rhsim01G0121700 Rhododendron simsii HOM05D007678 ORTHO05D009658 3.9e-25 118.2 88 65.9
Thecc.10G137600 Theobroma cacao HOM05D007678 ORTHO05D009658 3.9e-25 118.2 84 67.9
Duzib106G1843 Durio zibethinus HOM05D007678 ORTHO05D009658 5.1e-25 117.9 85 65.9
HanXRQChr12g0376111 Helianthus annuus HOM05D007678 ORTHO05D009658 5.1e-25 117.9 87 66.7
Nitab4.5_0000062g0570 Nicotiana tabacum HOM05D007678 ORTHO05D009658 5.1e-25 117.9 84 65.5
FvH4_7g04260 Fragaria vesca HOM05D007678 ORTHO05D009658 6.7e-25 117.5 85 68.2
FAN10G0661 Fragaria x ananassa HOM05D007678 ORTHO05D009658 6.7e-25 117.5 85 68.2
CiPaw.14G011000 Carya illinoinensis HOM05D007678 ORTHO05D009658 1.5e-24 116.3 86 67.4
Nitab4.5_0008005g0010 Nicotiana tabacum HOM05D007678 ORTHO05D009658 1.5e-24 116.3 78 69.2
TWI38G1059 Tripterygium wilfordii HOM05D007678 ORTHO05D009658 1.5e-24 116.3 85 64.7
COL.COLO4_04659 Corchorus olitorius HOM05D007678 ORTHO05D009658 1.9e-24 115.9 85 67.1
Manes.04G155050 Manihot esculenta HOM05D007678 ORTHO05D009658 1.9e-24 115.9 87 66.7
Gohir.D10G198600 Gossypium hirsutum HOM05D007678 ORTHO05D009658 3.3e-24 115.2 85 63.5
Gorai.011G222500 Gossypium raimondii HOM05D007678 ORTHO05D009658 3.3e-24 115.2 85 63.5
MBI13_g30074_MAGBIO Magnolia biondii HOM05D007678 ORTHO05D009658 5.6e-24 114.4 85 64.7
Gohir.A10G190900 Gossypium hirsutum HOM05D007678 ORTHO05D009658 7.4e-24 114.0 85 64.7
Hund13420 Selenicereus undatus HOM05D007678 ORTHO05D009658 9.6e-24 113.6 86 64.0
Lalb_Chr17g0337231 Lupinus albus HOM05D007678 ORTHO05D009658 1.6e-23 112.8 85 67.1
CANSAT56G0191 Cannabis sativa HOM05D007678 ORTHO05D009658 2.1e-23 112.5 84 65.5
Haze_02966 Corylus avellana HOM05D007678 ORTHO05D009658 2.1e-23 112.5 85 64.7
TPR.G8973 Trifolium pratense HOM05D007678 ORTHO05D009658 2.1e-23 112.5 85 62.4
Ah.12g064780 Amaranthus hybridus HOM05D007678 ORTHO05D009658 4.8e-23 111.3 89 58.4
PGR031G1114 Punica granatum HOM05D007678 ORTHO05D009658 8.2e-23 110.5 85 61.2
Ca_04109_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 1.1e-22 110.2 85 62.4
Ca_04118_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 1.1e-22 110.2 85 62.4
EL10Ac2g02701 Beta vulgaris HOM05D007678 ORTHO05D009658 2.4e-22 109.0 89 59.6
Migut.J01589 Erythranthe guttata HOM05D007678 ORTHO05D009658 2.4e-22 109.0 85 62.4
Medtr7g009670 Medicago truncatula HOM05D007678 ORTHO05D009658 3.1e-22 108.6 85 61.2
Sc10g0003150 Simmondsia chinensis HOM05D007678 ORTHO05D009658 4.0e-22 108.2 86 64.0
arahy.Tifrunner.gnm1.ann1.EB95VJ Arachis hypogaea HOM05D007678 ORTHO05D009658 5.3e-22 107.8 85 58.8
Lj1g0010481 Lotus japonicus HOM05D007678 ORTHO05D009658 5.3e-22 107.8 75 65.3
Psat3g196520 Pisum sativum HOM05D007678 ORTHO05D009658 6.9e-22 107.5 85 61.2
VMungo1383G0210 Vigna mungo HOM05D000430 ORTHO05D009658 1.5e-21 106.3 75 64.0
unitig_37.g12769 Utricularia gibba HOM05D007678 ORTHO05D009658 2.0e-21 105.9 75 68.0
DCAR_001914 Daucus carota HOM05D007678 ORTHO05D009658 2.6e-21 105.5 86 61.6
Eucgr.G03196 Eucalyptus grandis HOM05D007678 ORTHO05D009658 7.6e-21 104.0 85 61.2
Glyma.09G240200 Glycine max HOM05D007678 ORTHO05D009658 2.9e-20 102.1 85 57.6
QL04p022035 Quercus lobata HOM05D007678 ORTHO05D009658 2.5e-19 99.0 84 59.5
QL04p021923 Quercus lobata HOM05D007678 ORTHO05D009658 3.2e-19 98.6 83 59.0
vmacro20847 Vaccinium macrocarpon HOM05D007678 ORTHO05D009658 5.5e-19 97.8 100 53.0
ATR0307G037 Amborella trichopoda HOM05D007678 ORTHO05D009658 1.2e-18 96.7 86 55.8
AUR62031676 Chenopodium quinoa HOM05D007678 ORTHO05D009658 1.0e-17 93.6 90 51.1
Glyma.18G256300 Glycine max HOM05D007678 ORTHO05D009658 1.0e-17 93.6 102 48.0
HPP92_018248 Vanilla planifolia HOM05D007678 ORTHO05D009658 1.3e-17 93.2 82 53.7
Lsat_1_v5_gn_5_155661 Lactuca sativa HOM05D007678 ORTHO05D009658 6.7e-17 90.9 98 52.0
Zm00001eb303400 Zea mays HOM05D007678 ORTHO05D009658 9.0e-14 80.5 81 46.9
arahy.Tifrunner.gnm1.ann1.L3S1G4 Arachis hypogaea HOM05D007678 ORTHO05D009658 1.2e-13 80.1 80 52.5
Mapoly0003s0067 Marchantia polymorpha HOM05D007678 ORTHO05D009658 3.4e-13 78.6 80 43.8
CDE09G0612 Ceratophyllum demersum HOM05D007678 ORTHO05D009658 5.0e-12 74.7 49 63.3
CBR_g30334 Chara braunii HOM05D007678 ORTHO05D009658 5.0e-12 74.7 83 43.4
SMO174G0167 Selaginella moellendorffii HOM05D007678 ORTHO05D009658 3.2e-11 72.0 79 41.8
Pp3c18_7980 Physcomitrium patens HOM05D007678 ORTHO05D009658 9.4e-11 70.5 81 39.5
QL04p021975 Quercus lobata HOM05D007678 ORTHO05D009658 2.3e-09 65.9 59 55.9
CsaV3_5G029470 Cucumis sativus L. HOM05D007678 ORTHO05D000003 1.5e-08 63.2 42 71.4
Cpa.g.sc33.162 Carica papaya HOM05D007678 ORTHO05D009658 1.1e-06 57.0 34 73.5
arahy.Tifrunner.gnm1.ann1.1DGF2A Arachis hypogaea HOM05D007678 ORTHO05D009658 1.4e-06 56.6 32 68.8


User provided reference genes

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