Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g20370 Coffea canephora HOM05D007667 ORTHO05D008033 2.7e-184 648.7 360 100.0
Oeu041986.1 Olea europaea HOM05D007667 ORTHO05D008033 6.5e-53 212.2 373 42.6
QL07p015392 Quercus lobata HOM05D007667 ORTHO05D008033 5.1e-50 202.6 374 40.4
CiPaw.09G161700 Carya illinoinensis HOM05D007667 ORTHO05D008033 6.3e-48 195.7 373 38.3
Cfa019904 Carpinus fangiana HOM05D007667 ORTHO05D008033 5.9e-46 189.1 370 38.1
Oeu060747.1 Olea europaea HOM05D007667 ORTHO05D008033 7.2e-44 182.2 371 39.9
arahy.Tifrunner.gnm1.ann1.2JVN0K Arachis hypogaea HOM05D007667 ORTHO05D008033 2.7e-43 180.3 383 39.4
arahy.Tifrunner.gnm1.ann1.B2YDCU Arachis hypogaea HOM05D007667 ORTHO05D008033 7.9e-43 178.7 384 38.8
MSTRG.6277 Avicennia marina HOM05D007667 ORTHO05D008033 2.3e-42 177.2 405 37.8
GSVIVG01025830001 Vitis vinifera HOM05D007667 ORTHO05D008033 2.3e-42 177.2 390 35.4
MD12G1111200 Malus domestica HOM05D007667 ORTHO05D008033 2.5e-41 173.7 381 35.4
Potri.016G024600 Populus trichocarpa HOM05D007667 ORTHO05D008033 7.4e-41 172.2 374 35.6
CANSAT01G1982 Cannabis sativa HOM05D007667 ORTHO05D008033 3.7e-40 169.9 405 32.8
Sabra16G0030500 Salix brachista HOM05D007667 ORTHO05D008033 3.7e-40 169.9 381 36.5
Phvul.001G101500 Phaseolus vulgaris HOM05D007667 ORTHO05D008033 6.3e-40 169.1 380 37.1
Migut.J01575 Erythranthe guttata HOM05D007667 ORTHO05D008033 1.8e-39 167.5 372 36.0
Glyma.19G122200 Glycine max HOM05D007667 ORTHO05D008033 2.6e-38 163.7 383 36.6
Sabra06G0019700 Salix brachista HOM05D007667 ORTHO05D008033 3.4e-38 163.3 381 33.9
Lalb_Chr14g0365211 Lupinus albus HOM05D007667 ORTHO05D008033 8.5e-37 158.7 379 35.1
SGA_v2.0_scaffold66G22329 Striga asiatica HOM05D007667 ORTHO05D008033 8.5e-37 158.7 373 33.8
Glyma.03G003800 Glycine max HOM05D007667 ORTHO05D008033 1.4e-36 157.9 380 36.1
VMungo1383G2866 Vigna mungo HOM05D007667 ORTHO05D008033 2.5e-36 157.1 380 35.8
Psat0s3111g0200 Pisum sativum HOM05D007667 ORTHO05D008033 1.6e-35 154.5 369 35.5
Lj1g0016001 Lotus japonicus HOM05D007667 ORTHO05D008033 7.9e-35 152.1 378 35.2
Medtr7g087970 Medicago truncatula HOM05D007667 ORTHO05D008033 1.0e-34 151.8 370 35.1
PGR142G2092 Punica granatum HOM05D007667 ORTHO05D008033 5.1e-34 149.4 420 32.9
Potri.006G026600 Populus trichocarpa HOM05D007667 ORTHO05D008033 8.8e-34 148.7 379 32.2
Haze_20347 Corylus avellana HOM05D007667 ORTHO05D008033 2.5e-33 147.1 304 38.2
SalBow6G3731 Salvia bowleyana HOM05D007667 ORTHO05D008033 9.7e-33 145.2 512 28.5
TAR623G0652 Trochodendron aralioides HOM05D007667 ORTHO05D008033 3.1e-31 140.2 410 32.9
CsaV3_4G028970 Cucumis sativus L. HOM05D007667 ORTHO05D008033 5.9e-30 136.0 430 30.9
CSS0027019 Camellia sinensis var. sinensis HOM05D007667 ORTHO05D008033 7.7e-30 135.6 313 35.8
ClCG04G005020 Citrullus lanatus HOM05D007667 ORTHO05D008033 7.7e-30 135.6 446 31.6
TWI77G1010 Tripterygium wilfordii HOM05D007667 ORTHO05D008033 2.2e-29 134.0 380 35.0
Thecc.05G130400 Theobroma cacao HOM05D007667 ORTHO05D008033 2.9e-29 133.7 365 31.5
Ciclev10012153m.g Citrus clementina HOM05D007667 ORTHO05D008033 6.5e-29 132.5 384 33.1
MBI13_g29622_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 8.5e-29 132.1 408 33.6
Sed0012185 Sechium edule HOM05D007667 ORTHO05D008033 1.9e-28 131.0 431 31.1
Atru.chr8.918 Acer truncatum HOM05D007667 ORTHO05D008033 1.2e-27 128.3 373 32.2
Eucgr.K01702 Eucalyptus grandis HOM05D007667 ORTHO05D008033 2.7e-27 127.1 433 30.0
Duzib128G0300 Durio zibethinus HOM05D007667 ORTHO05D008033 4.7e-27 126.3 339 30.4
Manes.08G067300 Manihot esculenta HOM05D007667 ORTHO05D008033 6.7e-26 122.5 261 32.6
COL.COLO4_22773 Corchorus olitorius HOM05D007667 ORTHO05D008033 8.8e-26 122.1 270 33.3
Aqoxy3G03841 Aquilegia oxysepala HOM05D007667 ORTHO05D008033 3.3e-25 120.2 391 29.4
TPR.G23684 Trifolium pratense HOM05D007667 ORTHO05D008033 7.4e-25 119.0 344 32.3
Nitab4.5_0002201g0030 Nicotiana tabacum HOM05D007667 ORTHO05D008033 3.7e-24 116.7 367 31.6
Lj1A1064T35 Lonicera japonica HOM05D007667 ORTHO05D008033 1.1e-23 115.2 214 41.1
RhsimUnG0021200 Rhododendron simsii HOM05D007667 ORTHO05D008033 1.8e-23 114.4 398 29.4
vmacro07594 Vaccinium macrocarpon HOM05D007667 ORTHO05D008033 4.1e-23 113.2 414 30.2
Sc13g0000730 Simmondsia chinensis HOM05D007667 ORTHO05D008033 1.6e-22 111.3 492 27.8
RcHm_v2.0_Chr3g0495051 Rosa chinensis HOM05D007667 ORTHO05D008033 2.6e-22 110.5 406 30.8
SalBow6G3030 Salvia bowleyana HOM05D007667 ORTHO05D008033 2.6e-22 110.5 505 25.9
ClCG10G016970 Citrullus lanatus HOM05D007667 ORTHO05D008033 1.3e-21 108.2 267 33.7
Nn7g37184 Nelumbo nucifera HOM05D007667 ORTHO05D001109 2.2e-21 107.5 383 29.5
Solyc08g067000.3 Solanum lycopersicum HOM05D007667 ORTHO05D008033 2.2e-21 107.5 368 30.4
PGSC0003DMG400029088 Solanum tuberosum HOM05D007667 ORTHO05D008033 2.1e-19 100.9 351 29.3
EL10Ac3g07362 Beta vulgaris HOM05D007667 ORTHO05D008033 2.7e-19 100.5 398 31.4
Sopen08g020950 Solanum pennellii HOM05D007667 ORTHO05D008033 1.0e-18 98.6 366 30.1
DCAR_020622 Daucus carota HOM05D007667 ORTHO05D008033 3.0e-18 97.1 153 41.2
Hund19052 Selenicereus undatus HOM05D007667 ORTHO05D008033 9.7e-17 92.0 429 28.7
Lalb_Chr22g0358161 Lupinus albus HOM05D007667 ORTHO05D008033 1.7e-16 91.3 103 50.5
MELO3C030720.2 Cucumis melo HOM05D007667 ORTHO05D008033 1.1e-15 88.6 273 31.5
Dinv02787 Davidia involucrata HOM05D007667 ORTHO05D008033 1.3e-13 81.6 264 34.1
Prupe.7G023900 Prunus persica HOM05D007667 ORTHO05D008033 1.1e-12 78.6 248 33.9
arahy.Tifrunner.gnm1.ann1.EU10QV Arachis hypogaea HOM05D007667 ORTHO05D008033 4.2e-12 76.6 202 37.6
Ca_08329_v3 Cicer arietinum L. HOM05D007667 ORTHO05D008033 4.2e-12 76.6 251 33.5
Sed0023543 Sechium edule HOM05D007667 ORTHO05D008033 1.2e-11 75.1 236 32.2
Ah.13g077440 Amaranthus hybridus HOM05D007667 ORTHO05D008033 1.6e-11 74.7 409 25.9
arahy.Tifrunner.gnm1.ann1.8XR3F9 Arachis hypogaea HOM05D007667 ORTHO05D008033 2.7e-11 73.9 201 37.3
MELO3C019169.2 Cucumis melo HOM05D007667 ORTHO05D008033 8.0e-11 72.4 163 32.5
HPP92_012452 Vanilla planifolia HOM05D007667 ORTHO05D008033 8.0e-11 72.4 378 26.5
CsaV3_3G039420 Cucumis sativus L. HOM05D007667 ORTHO05D008033 1.0e-10 72.0 405 26.4
Actinidia37860 Actinidia chinensis HOM05D007667 ORTHO05D008033 1.4e-10 71.6 77 48.1
AUR62043193 Chenopodium quinoa HOM05D003743 ORTHO05D004311 3.0e-10 70.5 357 29.1
Cfa010473 Carpinus fangiana HOM05D007667 ORTHO05D008033 1.5e-09 68.2 187 34.8
THA.LOC104803305 Tarenaya hassleriana HOM05D009749 ORTHO05D008033 2.0e-09 67.8 208 27.9
Lalb_Chr22g0358171 Lupinus albus HOM05D007667 ORTHO05D008033 3.4e-09 67.0 192 35.9
BcaC08g44807 Brassica carinata HOM05D009749 ORTHO05D008033 5.7e-09 66.2 232 27.2
C06p23780 Brassica napus HOM05D009749 ORTHO05D008033 9.8e-09 65.5 232 27.2
MBI13_g08646_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 1.7e-08 64.7 69 47.8
arahy.Tifrunner.gnm1.ann1.3W78Z9 Arachis hypogaea HOM05D007667 ORTHO05D008033 2.2e-08 64.3 96 49.0
arahy.Tifrunner.gnm1.ann1.8931ZB Arachis hypogaea HOM05D007667 ORTHO05D008033 2.8e-08 63.9 155 38.7
BolC6t37547H Brassica oleracea HOM05D009749 ORTHO05D008033 2.8e-08 63.9 227 26.9
A04p03560 Brassica napus HOM05D009749 ORTHO05D008033 4.8e-08 63.2 236 24.6
A07p23080 Brassica napus HOM05D009749 ORTHO05D008033 6.3e-08 62.8 229 26.6
BraA07t29970Z Brassica rapa HOM05D009749 ORTHO05D008033 6.3e-08 62.8 229 26.6
Thhalv10006250m.g Eutrema salsugineum HOM05D009749 ORTHO05D008033 1.1e-07 62.0 89 32.6
C04p35700 Brassica napus HOM05D009749 ORTHO05D008033 1.4e-07 61.6 234 22.2
AL5G38190 Arabidopsis lyrata HOM05D009749 ORTHO05D008033 1.8e-07 61.2 235 23.4
AUR62020980 Chenopodium quinoa HOM05D007667 ORTHO05D008033 1.8e-07 61.2 104 37.5
PSO339G5815 Papaver somniferum HOM05D007667 ORTHO05D008033 1.8e-07 61.2 458 24.0
AT3G56810 Arabidopsis thaliana HOM05D009749 ORTHO05D008033 4.1e-07 60.1 235 22.6
BraA04t16080Z Brassica rapa HOM05D009749 ORTHO05D008033 4.1e-07 60.1 240 23.3
BolC4t25234H Brassica oleracea HOM05D009749 ORTHO05D008033 5.4e-07 59.7 239 23.8
CDE02G4005 Ceratophyllum demersum HOM05D000558 ORTHO05D008033 5.4e-07 59.7 268 24.6
BcaC07g39991 Brassica carinata HOM05D009749 ORTHO05D008033 7.0e-07 59.3 231 23.8
BolC8t50822H Brassica oleracea HOM05D009749 ORTHO05D008033 7.0e-07 59.3 231 23.8
BcaB02g08346 Brassica carinata HOM05D009749 ORTHO05D008033 1.2e-06 58.5 234 21.8
BcaC07g40118 Brassica carinata HOM05D009749 ORTHO05D008033 1.2e-06 58.5 88 31.8
arahy.Tifrunner.gnm1.ann1.S7MPKE Arachis hypogaea HOM05D007667 ORTHO05D008033 1.6e-06 58.2 96 46.9
BcaB02g07636 Brassica carinata HOM05D009749 ORTHO05D008033 1.6e-06 58.2 229 24.0
CARHR166960 Cardamine hirsuta HOM05D009749 ORTHO05D008033 2.0e-06 57.8 240 22.5
C08p32040 Brassica napus HOM05D009749 ORTHO05D008033 3.5e-06 57.0 231 23.4
A09p49630 Brassica napus HOM05D009749 ORTHO05D008033 5.9e-06 56.2 258 22.9
BraA09t40416Z Brassica rapa HOM05D009749 ORTHO05D008033 5.9e-06 56.2 258 22.9
PSO384G0308 Papaver somniferum HOM05D007667 ORTHO05D008033 5.9e-06 56.2 239 28.9


User provided reference genes

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