Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g20250 Coffea canephora HOM05D000003 ORTHO05D000126 2.2e-140 502.3 251 100.0
COL.COLO4_18925 Corchorus olitorius HOM05D000003 ORTHO05D000126 1.8e-09 67.4 83 39.8
QL08p022458 Quercus lobata HOM05D000003 ORTHO05D000126 1.8e-09 67.4 83 36.1
Dinv38130 Davidia involucrata HOM05D000003 ORTHO05D000126 5.2e-09 65.9 79 43.0
QL08p063412 Quercus lobata HOM05D000003 ORTHO05D000126 3.4e-08 63.2 67 47.8
QL07p048591 Quercus lobata HOM05D000003 ORTHO05D000126 4.4e-08 62.8 62 41.9
QL10p058267 Quercus lobata HOM05D000003 ORTHO05D000126 4.4e-08 62.8 52 50.0
QL12p015288 Quercus lobata HOM05D000003 ORTHO05D000126 4.4e-08 62.8 52 50.0
QL93p2011_0013 Quercus lobata HOM05D000003 ORTHO05D000126 4.4e-08 62.8 52 50.0
Dinv19695 Davidia involucrata HOM05D000003 ORTHO05D000126 5.8e-08 62.4 74 41.9
QL06p037254 Quercus lobata HOM05D000003 ORTHO05D000126 5.8e-08 62.4 127 28.3
QL10p014656 Quercus lobata HOM05D000003 ORTHO05D000126 5.8e-08 62.4 111 36.0
QL01p000768 Quercus lobata HOM05D000003 ORTHO05D000126 7.5e-08 62.0 52 50.0
Haze_05455 Corylus avellana HOM05D000003 ORTHO05D000126 9.8e-08 61.6 63 41.3
TWI38G2234 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 1.3e-07 61.2 128 27.3
QL11p053357 Quercus lobata HOM05D000005 ORTHO05D000012 1.7e-07 60.8 71 36.6
QL10p010330 Quercus lobata HOM05D000003 ORTHO05D000126 2.2e-07 60.5 82 34.1
CANSAT64G1905 Cannabis sativa HOM05D000003 ORTHO05D000126 3.7e-07 59.7 51 49.0
QL02p012498 Quercus lobata HOM05D000003 ORTHO05D000126 3.7e-07 59.7 71 38.0
QL06p025438 Quercus lobata HOM05D000003 ORTHO05D000126 3.7e-07 59.7 58 43.1
COL.COLO4_37225 Corchorus olitorius HOM05D000003 ORTHO05D000126 4.9e-07 59.3 125 30.4
QL10p065510 Quercus lobata HOM05D000003 ORTHO05D000126 4.9e-07 59.3 65 40.0
QL11p049571 Quercus lobata HOM05D000003 ORTHO05D000126 4.9e-07 59.3 52 46.2
Rhsim03G0083400 Rhododendron simsii HOM05D000003 ORTHO05D000126 6.4e-07 58.9 50 52.0
COL.COLO4_10561 Corchorus olitorius HOM05D000003 ORTHO05D000126 8.3e-07 58.5 116 29.3
Dinv17959 Davidia involucrata HOM05D000003 ORTHO05D000126 8.3e-07 58.5 53 43.4
QL06p038048 Quercus lobata HOM05D000029 ORTHO05D001395 8.3e-07 58.5 95 33.7
QL09p054237 Quercus lobata HOM05D000003 ORTHO05D000126 8.3e-07 58.5 84 35.7
Rhsim02G0238400 Rhododendron simsii HOM05D000003 ORTHO05D000126 8.3e-07 58.5 68 44.1
Rhsim04G0242400 Rhododendron simsii HOM05D000003 ORTHO05D000004 8.3e-07 58.5 105 34.3
Dinv24168 Davidia involucrata HOM05D000723 ORTHO05D001760 1.1e-06 58.2 58 39.7
Dinv44808 Davidia involucrata HOM05D000003 ORTHO05D000126 1.1e-06 58.2 58 39.7
QL11p021813 Quercus lobata HOM05D000003 ORTHO05D000126 1.1e-06 58.2 84 33.3
AUR62036218 Chenopodium quinoa HOM05D000003 ORTHO05D000126 1.4e-06 57.8 120 34.2
AUR62044363 Chenopodium quinoa HOM05D000003 ORTHO05D000126 1.4e-06 57.8 120 34.2
CSS0013263 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 1.9e-06 57.4 123 27.6
AUR62022378 Chenopodium quinoa HOM05D000003 ORTHO05D000126 1.9e-06 57.4 141 29.8
FvH4_7g06172 Fragaria vesca HOM05D015790 ORTHO05D000126 1.9e-06 57.4 65 40.0
QL02p095319 Quercus lobata HOM05D000003 ORTHO05D000126 1.9e-06 57.4 63 38.1
QL04p042331 Quercus lobata HOM05D010191 ORTHO05D012369 1.9e-06 57.4 60 41.7
QL04p042338 Quercus lobata HOM05D000003 ORTHO05D000126 1.9e-06 57.4 60 41.7
QL04p056296 Quercus lobata HOM05D000003 ORTHO05D000004 1.9e-06 57.4 62 43.5
QL05p054887 Quercus lobata HOM05D000003 ORTHO05D000126 1.9e-06 57.4 133 31.6
CSS0044481 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 2.4e-06 57.0 48 50.0
COL.COLO4_36557 Corchorus olitorius HOM05D000003 ORTHO05D000126 2.4e-06 57.0 210 27.6
Rhsim06G0091800 Rhododendron simsii HOM05D000003 ORTHO05D000126 2.4e-06 57.0 111 31.5
Dinv10706 Davidia involucrata HOM05D000003 ORTHO05D000126 3.2e-06 56.6 53 45.3
Dinv25744 Davidia involucrata HOM05D000003 ORTHO05D000126 3.2e-06 56.6 64 42.2
Lj1P554T9 Lonicera japonica HOM05D000003 ORTHO05D000126 3.2e-06 56.6 72 36.1
QL04p053003 Quercus lobata HOM05D000003 ORTHO05D000126 3.2e-06 56.6 58 39.7
QL05p063585 Quercus lobata HOM05D000003 ORTHO05D000126 3.2e-06 56.6 50 48.0
QL08p005297 Quercus lobata HOM05D000003 ORTHO05D000006 3.2e-06 56.6 50 48.0
QL08p015746 Quercus lobata HOM05D000003 ORTHO05D000126 3.2e-06 56.6 49 46.9
QL10p002713 Quercus lobata HOM05D000003 ORTHO05D000126 3.2e-06 56.6 73 38.4
QL11p047246 Quercus lobata HOM05D000003 ORTHO05D000126 3.2e-06 56.6 62 38.7
EL10Ac9g20692 Beta vulgaris HOM05D000003 ORTHO05D000126 4.1e-06 56.2 69 42.0
CANSAT25G1151 Cannabis sativa HOM05D000003 ORTHO05D000126 4.1e-06 56.2 51 47.1
COL.COLO4_13287 Corchorus olitorius HOM05D000003 ORTHO05D000126 4.1e-06 56.2 260 27.3
QL04p039774 Quercus lobata HOM05D000003 ORTHO05D000126 4.1e-06 56.2 108 29.6
Oeu013934.1 Olea europaea HOM05D000003 ORTHO05D000126 5.4e-06 55.8 61 42.6
QL01p027611 Quercus lobata HOM05D000003 ORTHO05D000126 5.4e-06 55.8 68 39.7
QL02p097725 Quercus lobata HOM05D000003 ORTHO05D000004 5.4e-06 55.8 111 31.5
SGA_v2.0_scaffold19G08685 Striga asiatica HOM05D017992 ORTHO05D000126 5.4e-06 55.8 61 41.0
CANSAT11G0488 Cannabis sativa HOM05D000003 ORTHO05D000126 7.0e-06 55.5 154 26.0
Dinv00188 Davidia involucrata HOM05D000003 ORTHO05D000126 7.0e-06 55.5 76 38.2
Dinv11094 Davidia involucrata HOM05D000003 ORTHO05D000126 7.0e-06 55.5 57 49.1
QL03p033500 Quercus lobata HOM05D000003 ORTHO05D000126 7.0e-06 55.5 69 37.7
QL08p015957 Quercus lobata HOM05D000003 ORTHO05D000126 7.0e-06 55.5 67 37.3
QL09p041419 Quercus lobata HOM05D000003 ORTHO05D000126 7.0e-06 55.5 53 43.4
Rhsim03G0167400 Rhododendron simsii HOM05D000003 ORTHO05D000126 7.0e-06 55.5 119 31.9
TWI31G0369 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 7.0e-06 55.5 141 31.9
CANSAT21G2347 Cannabis sativa HOM05D000003 ORTHO05D000126 9.2e-06 55.1 46 47.8
CANSAT78G0953 Cannabis sativa HOM05D000003 ORTHO05D000006 9.2e-06 55.1 52 44.2
AUR62032102 Chenopodium quinoa HOM05D000003 ORTHO05D000126 9.2e-06 55.1 49 49.0
AUR62039640 Chenopodium quinoa HOM05D000003 ORTHO05D000126 9.2e-06 55.1 58 43.1
COL.COLO4_26026 Corchorus olitorius HOM05D000003 ORTHO05D000126 9.2e-06 55.1 59 44.1
QL05p062331 Quercus lobata HOM05D000003 ORTHO05D000126 9.2e-06 55.1 54 40.7
QL06p023978 Quercus lobata HOM05D000003 ORTHO05D000126 9.2e-06 55.1 86 30.2
Rhsim01G0092500 Rhododendron simsii HOM05D000003 ORTHO05D000126 9.2e-06 55.1 69 39.1


User provided reference genes

Program Settings