Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g19610 Coffea canephora HOM05D006326 ORTHO05D007589 0.0e+00 1087.4 669 100.0
Actinidia37880 Actinidia chinensis HOM05D006326 ORTHO05D007589 4.1e-101 373.2 543 47.0
Prupe.7G034100 Prunus persica HOM05D006326 ORTHO05D007589 6.7e-80 302.8 546 41.6
Dinv05303 Davidia involucrata HOM05D006326 ORTHO05D007589 4.8e-70 270.0 452 47.8
Actinidia17957 Actinidia chinensis HOM05D006326 ORTHO05D007589 1.4e-69 268.5 449 44.1
Sopen12g010520 Solanum pennellii HOM05D006326 ORTHO05D007589 5.4e-69 266.5 585 40.0
GSVIVG01033643001 Vitis vinifera HOM05D006326 ORTHO05D007589 2.0e-68 264.6 462 41.1
CSS0039389 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 1.7e-67 261.5 456 49.1
TWI74G0746 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 2.1e-65 254.6 503 40.6
MELO3C019097.2 Cucumis melo HOM05D006326 ORTHO05D007589 2.3e-64 251.1 504 43.1
TWI53G1954 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 2.6e-63 247.7 531 38.8
CiPaw.10G040500 Carya illinoinensis HOM05D006326 ORTHO05D007589 7.5e-63 246.1 573 37.9
CANSAT64G1393 Cannabis sativa HOM05D006326 ORTHO05D007589 5.4e-61 240.0 549 37.9
Dinv07946 Davidia involucrata HOM05D006326 ORTHO05D007589 7.0e-61 239.6 460 42.8
Migut.J01646 Erythranthe guttata HOM05D006326 ORTHO05D007589 1.6e-60 238.4 565 36.1
Ciclev10011438m.g Citrus clementina HOM05D006326 ORTHO05D007589 2.0e-60 238.0 532 38.7
Atru.chr1.1394 Acer truncatum HOM05D006326 ORTHO05D007589 3.8e-59 233.8 456 37.9
Peaxi162Scf00076g00325 Petunia axillaris HOM05D006326 ORTHO05D007589 5.0e-59 233.4 456 47.1
Eucgr.B03116 Eucalyptus grandis HOM05D006326 ORTHO05D007589 9.5e-58 229.2 522 35.6
FAN24G3485 Fragaria x ananassa HOM05D006326 ORTHO05D007589 1.0e-56 225.7 523 37.7
Sc13g0001090 Simmondsia chinensis HOM05D006326 ORTHO05D007589 1.4e-56 225.3 511 39.5
Manes.09G004100 Manihot esculenta HOM05D006326 ORTHO05D007589 2.0e-55 221.5 431 42.5
Oeu057784.1 Olea europaea HOM05D006326 ORTHO05D007589 5.8e-55 219.9 445 39.6
PSO384G3095 Papaver somniferum HOM05D006326 ORTHO05D007589 5.8e-55 219.9 525 37.0
PSO339G2802 Papaver somniferum HOM05D006326 ORTHO05D007589 7.5e-55 219.5 522 35.4
SalBow6G7225 Salvia bowleyana HOM05D006326 ORTHO05D007589 1.7e-54 218.4 442 38.2
Oeu057785.1 Olea europaea HOM05D006326 ORTHO05D007589 2.2e-54 218.0 445 39.3
Oeu022970.2 Olea europaea HOM05D006326 ORTHO05D007589 3.2e-53 214.2 466 40.3
Duzib128G1973 Durio zibethinus HOM05D006326 ORTHO05D007589 2.0e-52 211.5 491 37.1
MD14G1089900 Malus domestica HOM05D006326 ORTHO05D007589 7.8e-52 209.5 476 35.7
CiPaw.09G048500 Carya illinoinensis HOM05D006326 ORTHO05D007589 1.0e-51 209.1 450 37.6
Thecc.05G128800 Theobroma cacao HOM05D006326 ORTHO05D007589 2.3e-51 208.0 456 41.9
CsaV3_4G029490 Cucumis sativus L. HOM05D006326 ORTHO05D007589 4.7e-49 200.3 437 37.8
RcHm_v2.0_Chr6g0276151 Rosa chinensis HOM05D006326 ORTHO05D007589 5.2e-48 196.8 449 38.1
THA.LOC104815890 Tarenaya hassleriana HOM05D006326 ORTHO05D007589 1.5e-47 195.3 516 43.8
DCAR_013645 Daucus carota HOM05D002003 ORTHO05D002037 2.6e-47 194.5 444 36.0
Nitab4.5_0002982g0070 Nicotiana tabacum HOM05D006326 ORTHO05D007589 1.3e-46 192.2 460 41.7
MSTRG.19798 Avicennia marina HOM05D006326 ORTHO05D007589 2.9e-46 191.0 465 37.4
Nitab4.5_0000237g0060 Nicotiana tabacum HOM05D006326 ORTHO05D007589 4.9e-46 190.3 463 42.1
SGA_v2.0_scaffold69G23160 Striga asiatica HOM05D006326 ORTHO05D007589 4.6e-44 183.7 434 35.5
TAR623G0088 Trochodendron aralioides HOM05D006326 ORTHO05D007589 7.8e-44 183.0 475 33.7
Glyma.02G166100 Glycine max HOM05D006326 ORTHO05D007589 1.7e-43 181.8 439 35.3
Potri.016G036000 Populus trichocarpa HOM05D006326 ORTHO05D007589 5.1e-43 180.3 441 37.2
Ca_05361_v3 Cicer arietinum L. HOM05D006326 ORTHO05D007589 5.6e-42 176.8 445 36.9
Psat6g129480 Pisum sativum HOM05D006326 ORTHO05D007589 5.6e-42 176.8 449 36.3
ClCG04G005630 Citrullus lanatus HOM05D006326 ORTHO05D007589 1.2e-41 175.6 474 35.0
CAN.G51.3 Capsicum annuum HOM05D006326 ORTHO05D007589 1.8e-40 171.8 456 36.4
Dinv01681 Davidia involucrata HOM05D006326 ORTHO05D007589 1.5e-39 168.7 394 43.4
Haze_20235 Corylus avellana HOM05D006326 ORTHO05D007589 2.0e-39 168.3 419 42.7
Lj5g0016845 Lotus japonicus HOM05D006326 ORTHO05D007589 4.4e-39 167.2 445 35.7
Potri.006G039900 Populus trichocarpa HOM05D006326 ORTHO05D007589 7.1e-37 159.8 448 42.0
Lalb_Chr02g0156611 Lupinus albus HOM05D006326 ORTHO05D007589 9.2e-37 159.5 466 33.7
Gohir.D09G115200 Gossypium hirsutum HOM05D006326 ORTHO05D007589 1.2e-36 159.1 445 39.1
Gorai.006G132800 Gossypium raimondii HOM05D006326 ORTHO05D007589 6.0e-36 156.8 446 39.7
Sabra06G0026900 Salix brachista HOM05D006326 ORTHO05D007589 6.0e-36 156.8 453 41.5
SabraUnG0002500 Salix brachista HOM05D006326 ORTHO05D007589 6.0e-36 156.8 453 41.5
FAN20G2839 Fragaria x ananassa HOM05D006326 ORTHO05D007589 1.7e-35 155.2 467 34.5
FAN15G3215 Fragaria x ananassa HOM05D006326 ORTHO05D007589 3.0e-35 154.5 440 35.0
ATR0317G072 Amborella trichopoda HOM05D006326 ORTHO05D007589 6.6e-35 153.3 490 34.1
AUR62018355 Chenopodium quinoa HOM05D006326 ORTHO05D007589 4.3e-34 150.6 446 42.2
Sed0018260 Sechium edule HOM05D006326 ORTHO05D007589 6.2e-33 146.7 390 36.4
Aqoxy1G00376 Aquilegia oxysepala HOM05D006326 ORTHO05D007589 1.4e-32 145.6 450 33.6
Gohir.A09G118300 Gossypium hirsutum HOM05D006326 ORTHO05D007589 1.4e-32 145.6 445 37.5
Glyma.10G102200 Glycine max HOM05D006326 ORTHO05D007589 1.8e-32 145.2 445 32.6
Phvul.007G233400 Phaseolus vulgaris HOM05D006326 ORTHO05D007589 5.2e-32 143.7 455 31.2
FvH4_2g14070 Fragaria vesca HOM05D006326 ORTHO05D007589 6.8e-32 143.3 440 33.9
Lsat_1_v5_gn_9_29721 Lactuca sativa HOM05D006326 ORTHO05D007589 8.9e-32 142.9 442 34.2
Hma1.2p1_0252F.1_g102780 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 1.2e-31 142.5 378 45.0
AUR62030307 Chenopodium quinoa HOM05D006326 ORTHO05D007589 1.5e-31 142.1 446 41.5
PGR142G2735 Punica granatum HOM05D006326 ORTHO05D007589 1.3e-30 139.0 537 36.3
unitig_60.g25479 Utricularia gibba HOM05D006326 ORTHO05D007589 6.4e-30 136.7 443 32.7
A09p49570 Brassica napus HOM05D006326 ORTHO05D007589 1.4e-29 135.6 209 43.5
BraA09t40410Z Brassica rapa HOM05D006326 ORTHO05D007589 1.4e-29 135.6 209 43.5
vmacro07781 Vaccinium macrocarpon HOM05D006326 ORTHO05D007589 5.4e-29 133.7 458 41.5
QL07p011201 Quercus lobata HOM05D006326 ORTHO05D007589 7.8e-28 129.8 451 33.5
CSS0038712 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 1.7e-27 128.6 361 38.8
Hund19089 Selenicereus undatus HOM05D006326 ORTHO05D007589 2.3e-27 128.3 479 38.0
Cpa.g.sc92.89 Carica papaya HOM05D006326 ORTHO05D007589 6.6e-27 126.7 464 36.4
VMungo0720G1800 Vigna mungo HOM05D006326 ORTHO05D007589 1.1e-26 125.9 412 30.6
Thhalv10005957m.g Eutrema salsugineum HOM05D006326 ORTHO05D007589 3.3e-26 124.4 517 32.7
SGA_v2.0_scaffold66G22355 Striga asiatica HOM05D006326 ORTHO05D007589 5.6e-26 123.6 81 71.6
arahy.Tifrunner.gnm1.ann1.Z1KKER Arachis hypogaea HOM05D006326 ORTHO05D007589 1.2e-25 122.5 448 30.8
COL.COLO4_37458 Corchorus olitorius HOM05D006326 ORTHO05D007589 1.6e-25 122.1 425 33.2
arahy.Tifrunner.gnm1.ann1.0NJ1V1 Arachis hypogaea HOM05D006326 ORTHO05D007589 2.1e-25 121.7 448 31.2
SGA_v2.0_scaffold1000G53781 Striga asiatica HOM05D006326 ORTHO05D007589 1.1e-24 119.4 242 36.0
unitig_0.g603 Utricularia gibba HOM05D006326 ORTHO05D007589 1.4e-24 119.0 141 53.2
CARHR166860 Cardamine hirsuta HOM05D006326 ORTHO05D007589 1.8e-24 118.6 449 35.0
Solyc12g020000.3 Solanum lycopersicum HOM05D006326 ORTHO05D007589 6.9e-24 116.7 411 41.8
Medtr1g050510 Medicago truncatula HOM05D006326 ORTHO05D007589 1.5e-23 115.5 452 31.6
HPP92_019182 Vanilla planifolia HOM05D006326 ORTHO05D007589 8.4e-22 109.8 461 29.9
Zm00001eb185630 Zea mays HOM05D006326 ORTHO05D007589 8.4e-22 109.8 469 29.2
BolC8t50813H Brassica oleracea HOM05D006326 ORTHO05D007589 1.1e-21 109.4 129 46.5
Aa31LG10G11560 Aethionema arabicum HOM05D006326 ORTHO05D007589 1.4e-21 109.0 472 29.4
ECA247G0820 Erigeron canadensis HOM05D006326 ORTHO05D007589 5.4e-21 107.1 432 38.0
Nn7g36809 Nelumbo nucifera HOM05D006326 ORTHO05D007589 7.1e-21 106.7 461 30.2
Rhsim03G0036800 Rhododendron simsii HOM05D006326 ORTHO05D007589 1.2e-20 105.9 586 32.1
Sp5g05840 Schrenkiella parvula HOM05D006326 ORTHO05D007589 6.0e-20 103.6 451 29.3
Ah.13g076820 Amaranthus hybridus HOM05D002003 ORTHO05D002037 1.3e-19 102.4 451 32.6
BcaC07g39981 Brassica carinata HOM05D006326 ORTHO05D007589 1.3e-19 102.4 146 42.5
EL10Ac3g07247 Beta vulgaris HOM05D006326 ORTHO05D007589 1.7e-19 102.1 446 39.0
Hma1.2p1_0975F.1_g243130 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 3.0e-19 101.3 242 36.0
Hma1.2p1_0975F.1_g243140 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 3.0e-19 101.3 242 36.0
HanXRQChr15g0491141 Helianthus annuus HOM05D006326 ORTHO05D007589 1.1e-18 99.4 129 49.6
CDE04G2458 Ceratophyllum demersum HOM05D006326 ORTHO05D007589 1.9e-18 98.6 98 52.0
Carub.0005s2347 Capsella rubella HOM05D006326 ORTHO05D007589 2.1e-17 95.1 144 43.1
Mapoly0069s0088 Marchantia polymorpha HOM05D006326 ORTHO05D007589 6.9e-16 90.1 152 44.1
Pp3c14_4840 Physcomitrium patens HOM05D006326 ORTHO05D007589 1.5e-15 89.0 137 43.1
BcaC07g40122 Brassica carinata HOM05D006326 ORTHO05D007589 5.8e-15 87.0 441 30.4
C08p31960 Brassica napus HOM05D004518 ORTHO05D005434 7.6e-15 86.7 441 28.3
TPR.G7607 Trifolium pratense HOM05D006326 ORTHO05D007589 1.3e-14 85.9 448 33.9
AagrBONN_evm.TU.Sc2ySwM_344.979 Anthoceros agrestis HOM05D006326 ORTHO05D007589 2.4e-13 81.6 152 41.4
AL5G38090 Arabidopsis lyrata HOM05D006326 ORTHO05D007589 2.7e-12 78.2 459 27.2
CSS0022371 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 1.8e-11 75.5 63 57.1
Actinidia01832 Actinidia chinensis HOM05D006326 ORTHO05D007589 3.7e-09 67.8 68 57.4
Pp3c1_21670 Physcomitrium patens HOM05D006326 ORTHO05D007589 6.2e-09 67.0 62 53.2
SMO351G0508 Selaginella moellendorffii HOM05D006326 ORTHO05D007589 8.1e-09 66.6 144 36.8
CBR_g50470 Chara braunii HOM05D006326 ORTHO05D007589 1.3e-06 59.3 179 33.0
SGA_v2.0_scaffold66G22360 Striga asiatica HOM05D006326 ORTHO05D007589 8.4e-06 56.6 245 40.8


User provided reference genes

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