Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g19180 Coffea canephora HOM05D007488 ORTHO05D009461 1.1e-84 316.6 157 100.0
Migut.K00133 Erythranthe guttata HOM05D007488 ORTHO05D009461 3.7e-61 238.4 157 73.9
MSTRG.19810 Avicennia marina HOM05D007488 ORTHO05D009461 1.6e-56 223.0 157 68.8
Rhsim03G0039700 Rhododendron simsii HOM05D007488 ORTHO05D009461 2.3e-55 219.2 160 68.1
SGA_v2.0_scaffold94G28540 Striga asiatica HOM05D007488 ORTHO05D009461 1.6e-53 213.0 147 68.0
Ciclev10006109m.g Citrus clementina HOM05D007488 ORTHO05D009461 3.7e-53 211.8 160 63.1
Lsat_1_v5_gn_5_157940 Lactuca sativa HOM05D007488 ORTHO05D009461 1.8e-52 209.5 158 64.6
Haze_15889 Corylus avellana HOM05D007488 ORTHO05D009461 2.6e-51 205.7 161 64.6
Cfa003623 Carpinus fangiana HOM05D007488 ORTHO05D009461 5.9e-51 204.5 160 64.4
DCAR_016880 Daucus carota HOM05D007488 ORTHO05D009461 5.0e-50 201.4 160 64.4
Dinv09710 Davidia involucrata HOM05D007488 ORTHO05D009461 5.0e-50 201.4 160 63.1
Eucgr.A02247 Eucalyptus grandis HOM05D007488 ORTHO05D009461 8.5e-50 200.7 160 62.5
Actinidia01825 Actinidia chinensis HOM05D007488 ORTHO05D009461 1.9e-49 199.5 160 63.1
Nitab4.5_0001937g0020 Nicotiana tabacum HOM05D007488 ORTHO05D009461 1.9e-49 199.5 158 64.6
Nitab4.5_0000424g0040 Nicotiana tabacum HOM05D007488 ORTHO05D009461 4.2e-49 198.4 158 65.2
PGR142G4416 Punica granatum HOM05D007488 ORTHO05D009461 9.4e-49 197.2 161 59.6
Manes.09G005400 Manihot esculenta HOM05D007488 ORTHO05D009461 1.6e-48 196.4 160 60.0
ECA248G2641 Erigeron canadensis HOM05D007488 ORTHO05D009461 3.6e-48 195.3 158 62.0
HanXRQChr03g0061531 Helianthus annuus HOM05D007488 ORTHO05D009461 1.8e-47 193.0 158 60.8
SalBow1G5076 Salvia bowleyana HOM05D007488 ORTHO05D009461 1.8e-47 193.0 158 62.0
SalBow1G6194 Salvia bowleyana HOM05D007488 ORTHO05D009461 1.8e-47 193.0 158 62.0
CAN.G317.6 Capsicum annuum HOM05D007488 ORTHO05D009461 3.0e-47 192.2 157 62.4
Hund19096 Selenicereus undatus HOM05D007488 ORTHO05D009461 1.5e-46 189.9 162 61.7
Peaxi162Scf00076g00524 Petunia axillaris HOM05D007488 ORTHO05D009461 4.4e-46 188.3 146 60.3
MD14G1087900 Malus domestica HOM05D007488 ORTHO05D009461 1.3e-45 186.8 160 58.1
Sc18g0003830 Simmondsia chinensis HOM05D007488 ORTHO05D009461 1.7e-45 186.4 141 63.1
Lalb_Chr22g0357421 Lupinus albus HOM05D007488 ORTHO05D009461 2.8e-45 185.7 160 61.9
QL07p010346 Quercus lobata HOM05D007488 ORTHO05D009461 1.4e-44 183.3 158 58.9
TWI74G0203 Tripterygium wilfordii HOM05D007488 ORTHO05D009461 4.1e-44 181.8 148 58.8
CiPaw.09G047600 Carya illinoinensis HOM05D007488 ORTHO05D009461 1.5e-43 179.9 161 56.5
Nn4g25823 Nelumbo nucifera HOM05D007488 ORTHO05D009461 2.0e-43 179.5 162 58.0
Prupe.7G038600 Prunus persica HOM05D007488 ORTHO05D009461 2.6e-43 179.1 184 54.9
Psat3g078680 Pisum sativum HOM05D007488 ORTHO05D009461 3.4e-43 178.7 159 55.3
Ca_08393_v3 Cicer arietinum L. HOM05D007488 ORTHO05D009461 4.5e-43 178.3 159 56.6
Nitab4.5_0000812g0120 Nicotiana tabacum HOM05D007488 ORTHO05D009461 5.9e-43 177.9 162 56.2
Nitab4.5_0006279g0050 Nicotiana tabacum HOM05D007488 ORTHO05D009461 7.7e-43 177.6 162 54.9
Medtr7g089940 Medicago truncatula HOM05D007488 ORTHO05D009461 1.3e-42 176.8 161 56.5
TPR.G30624 Trifolium pratense HOM05D007488 ORTHO05D009461 8.5e-42 174.1 159 55.3
Sopen03g012080 Solanum pennellii HOM05D007488 ORTHO05D009461 1.9e-41 172.9 157 55.4
EL10Ac3g07236 Beta vulgaris HOM05D007488 ORTHO05D009461 2.5e-41 172.6 160 59.4
Duzib106G1788 Durio zibethinus HOM05D007488 ORTHO05D009461 3.6e-40 168.7 157 54.8
Aqoxy2G00394 Aquilegia oxysepala HOM05D007488 ORTHO05D009461 2.3e-39 166.0 188 49.5
Cpa.g.sc5.171 Carica papaya HOM05D007488 ORTHO05D009461 3.9e-39 165.2 163 52.8
CARHR136300 Cardamine hirsuta HOM05D007488 ORTHO05D009461 5.2e-39 164.9 162 51.9
Thecc.05G135000 Theobroma cacao HOM05D007488 ORTHO05D009461 5.2e-39 164.9 146 56.8
Atru.chr1.1442 Acer truncatum HOM05D007488 ORTHO05D009461 8.8e-39 164.1 162 54.3
Sp4g23500 Schrenkiella parvula HOM05D007488 ORTHO05D009461 1.5e-38 163.3 162 51.9
AL4G39170 Arabidopsis lyrata HOM05D007488 ORTHO05D009461 2.6e-38 162.5 162 51.2
AUR62030320 Chenopodium quinoa HOM05D007488 ORTHO05D009461 2.6e-38 162.5 164 51.8
AT2G41200 Arabidopsis thaliana HOM05D007488 ORTHO05D009461 7.4e-38 161.0 162 50.6
PSO339G1058 Papaver somniferum HOM05D007488 ORTHO05D009461 7.4e-38 161.0 161 51.6
Oeu063781.2 Olea europaea HOM05D004518 ORTHO05D005434 1.3e-37 160.2 108 73.1
Lj1g0022068 Lotus japonicus HOM05D007488 ORTHO05D009461 4.8e-37 158.3 162 52.5
BcaB01g03485 Brassica carinata HOM05D007488 ORTHO05D009461 6.3e-37 157.9 162 49.4
Thhalv10017345m.g Eutrema salsugineum HOM05D007488 ORTHO05D009461 1.1e-36 157.1 162 50.0
A03p23120 Brassica napus HOM05D007488 ORTHO05D009461 3.1e-36 155.6 162 48.8
BraA03t11533Z Brassica rapa HOM05D007488 ORTHO05D009461 3.1e-36 155.6 162 48.8
Carub.0004s2351 Capsella rubella HOM05D007488 ORTHO05D009461 5.3e-36 154.8 141 54.6
Gohir.A11G307200 Gossypium hirsutum HOM05D007488 ORTHO05D009461 5.3e-36 154.8 158 52.5
BcaC01g05355 Brassica carinata HOM05D007488 ORTHO05D009461 7.0e-36 154.5 162 48.8
C03p27550 Brassica napus HOM05D007488 ORTHO05D009461 7.0e-36 154.5 162 48.8
BolC3t15128H Brassica oleracea HOM05D007488 ORTHO05D009461 7.0e-36 154.5 162 48.8
Gohir.D11G322700 Gossypium hirsutum HOM05D007488 ORTHO05D009461 9.1e-36 154.1 158 51.3
TAR369G0408 Trochodendron aralioides HOM05D007488 ORTHO05D009461 9.1e-36 154.1 178 50.0
FAN05G4359 Fragaria x ananassa HOM05D007488 ORTHO05D009461 2.0e-35 152.9 186 47.3
Gorai.007G352800 Gossypium raimondii HOM05D007488 ORTHO05D009461 2.6e-35 152.5 158 50.6
FvH4_6g45840 Fragaria vesca HOM05D007488 ORTHO05D009461 3.5e-35 152.1 187 45.5
THA.LOC104803261 Tarenaya hassleriana HOM05D007488 ORTHO05D009461 4.5e-35 151.8 152 48.7
arahy.Tifrunner.gnm1.ann1.Z4B7ZU Arachis hypogaea HOM05D007488 ORTHO05D009461 1.3e-34 150.2 165 46.1
CANSAT64G0776 Cannabis sativa HOM05D007488 ORTHO05D009461 1.3e-34 150.2 163 48.5
AUR62018346 Chenopodium quinoa HOM05D007488 ORTHO05D009461 2.2e-34 149.4 164 49.4
FAN02G3897 Fragaria x ananassa HOM05D007488 ORTHO05D009461 5.0e-34 148.3 187 45.5
Glyma.19G130600 Glycine max HOM05D007488 ORTHO05D009461 8.5e-34 147.5 162 47.5
VMungo1383G0792 Vigna mungo HOM05D007488 ORTHO05D009461 2.5e-33 146.0 162 46.9
Phvul.001G123700 Phaseolus vulgaris HOM05D007488 ORTHO05D009461 3.2e-33 145.6 164 47.6
Ah.04g150940 Amaranthus hybridus HOM05D007488 ORTHO05D009461 2.7e-32 142.5 113 66.4
arahy.Tifrunner.gnm1.ann1.8RZU3Q Arachis hypogaea HOM05D007488 ORTHO05D009461 1.4e-31 140.2 166 45.2
Glyma.03G128000 Glycine max HOM05D007488 ORTHO05D009461 1.4e-31 140.2 162 45.7
Potri.006G038600 Populus trichocarpa HOM05D007488 ORTHO05D009461 4.0e-31 138.7 117 57.3
Lj1P1093T64 Lonicera japonica HOM05D007488 ORTHO05D009461 3.7e-29 132.1 83 74.7
RcHm_v2.0_Chr2g0164041 Rosa chinensis HOM05D007488 ORTHO05D009461 3.7e-29 132.1 162 45.1
Sopen10g029120 Solanum pennellii HOM05D000484 ORTHO05D000346 1.8e-28 129.8 138 47.1
BcaC02g12760 Brassica carinata HOM05D007488 ORTHO05D009461 5.5e-25 118.2 160 40.6
GSVIVG01033626001 Vitis vinifera HOM05D007488 ORTHO05D009461 8.0e-24 114.4 160 40.6
Peaxi162Scf00701g00057 Petunia axillaris HOM05D007488 ORTHO05D009461 2.3e-23 112.8 84 61.9
FAN14G1565 Fragaria x ananassa HOM05D007488 ORTHO05D009461 1.3e-21 107.1 82 61.0
PSO384G4473 Papaver somniferum HOM05D007488 ORTHO05D009461 2.2e-21 106.3 83 61.4
Aa31LG3G800 Aethionema arabicum HOM05D007488 ORTHO05D009461 8.3e-21 104.4 84 58.3
FAN09G2471 Fragaria x ananassa HOM05D007488 ORTHO05D009461 7.0e-20 101.3 156 39.1
C04p02520 Brassica napus HOM05D007488 ORTHO05D009461 9.1e-20 100.9 96 55.2
CDE09G0800 Ceratophyllum demersum HOM05D007488 ORTHO05D009461 5.9e-19 98.2 163 36.8
BolC4t21895H Brassica oleracea HOM05D007488 ORTHO05D009461 8.6e-18 94.4 79 59.5
unitig_21.g20692 Utricularia gibba HOM05D007488 ORTHO05D009461 8.6e-18 94.4 75 52.0
Zm00001eb347080 Zea mays HOM05D007488 ORTHO05D009461 2.8e-16 89.4 143 35.7
A05p02110 Brassica napus HOM05D007488 ORTHO05D009461 5.2e-15 85.1 98 50.0
BraA05t19207Z Brassica rapa HOM05D007488 ORTHO05D009461 5.2e-15 85.1 98 50.0
Solyc03g058440.1 Solanum lycopersicum HOM05D007488 ORTHO05D009461 8.9e-15 84.3 66 62.1
MBI18_g37945_MAGBIO Magnolia biondii HOM05D007488 ORTHO05D009461 1.1e-12 77.4 176 32.4
Zm00001eb362710 Zea mays HOM05D007488 ORTHO05D009461 2.1e-08 63.2 143 28.0
Os01g0955600 Oryza sativa ssp. japonica HOM05D007488 ORTHO05D009461 2.8e-08 62.8 112 34.8
ATR0057G037 Amborella trichopoda HOM05D007488 ORTHO05D009461 3.0e-07 59.3 167 29.9
Peaxi162Scf00245g00322 Petunia axillaris HOM05D005192 ORTHO05D006023 2.0e-06 56.6 131 31.3
MSTRG.17088 Avicennia marina HOM05D005192 ORTHO05D006023 7.5e-06 54.7 160 27.5


User provided reference genes

Program Settings