Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g18470 Coffea canephora HOM05D005891 ORTHO05D007214 0.0e+00 1482.6 737 100.0
Oeu015292.1 Olea europaea HOM05D005891 ORTHO05D007214 2.5e-213 746.1 653 57.9
Solyc04g017700.4 Solanum lycopersicum HOM05D005891 ORTHO05D007214 5.3e-211 738.4 738 53.1
Nitab4.5_0008674g0030 Nicotiana tabacum HOM05D005891 ORTHO05D007214 8.5e-209 731.1 733 52.7
Nitab4.5_0001618g0090 Nicotiana tabacum HOM05D005891 ORTHO05D007214 7.2e-208 728.0 733 52.7
Dinv14832 Davidia involucrata HOM05D005891 ORTHO05D007214 2.4e-203 713.0 667 55.5
Actinidia39186 Actinidia chinensis HOM05D005891 ORTHO05D007214 5.5e-200 701.8 735 50.1
Migut.K00113 Erythranthe guttata HOM05D005891 ORTHO05D007214 5.1e-198 695.3 745 51.9
CAN.G1237.25 Capsicum annuum HOM05D005891 ORTHO05D007214 1.1e-197 694.1 689 52.7
Haze_19761 Corylus avellana HOM05D005891 ORTHO05D007214 8.2e-196 688.0 729 51.4
PGSC0003DMG402007625 Solanum tuberosum HOM05D005891 ORTHO05D007214 9.1e-195 684.5 655 54.2
Hma1.2p1_0275F.1_g110840 Hydrangea macrophylla HOM05D005891 ORTHO05D007214 1.2e-194 684.1 664 52.6
QL07p004892 Quercus lobata HOM05D005891 ORTHO05D007214 7.7e-194 681.4 755 48.9
Sopen04g008780 Solanum pennellii HOM05D005891 ORTHO05D007214 1.3e-193 680.6 655 54.4
Atru.chr11.2650 Acer truncatum HOM05D005891 ORTHO05D007214 4.2e-192 675.6 757 48.5
Prupe.4G274500 Prunus persica HOM05D005891 ORTHO05D007214 1.4e-190 670.6 732 49.3
Potri.006G044500 Populus trichocarpa HOM05D005891 ORTHO05D007214 5.2e-190 668.7 731 49.2
FvH4_6g24900 Fragaria vesca HOM05D005891 ORTHO05D007214 4.4e-189 665.6 733 49.1
FAN14G5310 Fragaria x ananassa HOM05D005891 ORTHO05D007214 6.3e-188 661.8 733 48.8
FAN05G1661 Fragaria x ananassa HOM05D005891 ORTHO05D007214 1.4e-187 660.6 734 48.9
Rhsim03G0031400 Rhododendron simsii HOM05D005891 ORTHO05D007214 1.8e-187 660.2 736 48.2
TAR633G2073 Trochodendron aralioides HOM05D005891 ORTHO05D007214 3.1e-187 659.4 730 48.2
MD14G1081800 Malus domestica HOM05D005891 ORTHO05D007214 1.6e-186 657.1 729 49.2
RcHm_v2.0_Chr2g0124601 Rosa chinensis HOM05D005891 ORTHO05D007214 3.5e-186 656.0 729 48.6
Peaxi162Scf00130g01129 Petunia axillaris HOM05D005891 ORTHO05D007214 4.5e-186 655.6 734 49.5
CiPaw.09G043200 Carya illinoinensis HOM05D005891 ORTHO05D007214 1.0e-185 654.4 734 50.1
Manes.09G010000 Manihot esculenta HOM05D005891 ORTHO05D007214 1.0e-185 654.4 728 49.2
SalBow4G2335 Salvia bowleyana HOM05D005891 ORTHO05D007214 1.3e-185 654.1 745 49.1
Thecc.04G215900 Theobroma cacao HOM05D005891 ORTHO05D007214 1.3e-185 654.1 732 49.0
MD12G1089200 Malus domestica HOM05D005891 ORTHO05D007214 8.5e-185 651.4 738 48.2
Lalb_Chr20g0110281 Lupinus albus HOM05D005891 ORTHO05D007214 3.2e-184 649.4 728 49.2
Lsat_1_v5_gn_3_23040 Lactuca sativa HOM05D005891 ORTHO05D007214 5.5e-184 648.7 734 48.9
HanXRQChr17g0536551 Helianthus annuus HOM05D005891 ORTHO05D007214 3.6e-183 646.0 738 47.7
CANSAT80G2643 Cannabis sativa HOM05D005891 ORTHO05D007214 1.8e-182 643.7 728 48.4
Lj1g0021626 Lotus japonicus HOM05D005891 ORTHO05D007214 8.8e-182 641.3 732 47.5
COL.COLO4_20863 Corchorus olitorius HOM05D005891 ORTHO05D007214 3.4e-181 639.4 730 48.2
Gorai.006G219000 Gossypium raimondii HOM05D005891 ORTHO05D007214 3.4e-181 639.4 729 47.6
Gohir.A09G201700 Gossypium hirsutum HOM05D005891 ORTHO05D007214 1.8e-179 633.6 729 47.5
Duzib212G0478 Durio zibethinus HOM05D005891 ORTHO05D007214 1.2e-178 630.9 732 46.7
Sabra06G0030700 Salix brachista HOM05D005891 ORTHO05D007214 1.0e-177 627.9 694 49.1
Phvul.001G127800 Phaseolus vulgaris HOM05D005891 ORTHO05D007214 1.7e-177 627.1 730 48.1
SalBow1G2481 Salvia bowleyana HOM05D005891 ORTHO05D007214 2.9e-177 626.3 752 48.7
Glyma.18G212600 Glycine max HOM05D005891 ORTHO05D007214 3.8e-177 625.9 728 47.3
TWI53G1500 Tripterygium wilfordii HOM05D005891 ORTHO05D007214 2.5e-176 623.2 730 47.9
Glyma.03G131800 Glycine max HOM05D005891 ORTHO05D007214 9.4e-176 621.3 728 46.8
Medtr7g090600 Medicago truncatula HOM05D005891 ORTHO05D007214 9.4e-176 621.3 728 47.0
Ca_08420_v3 Cicer arietinum L. HOM05D005891 ORTHO05D007214 4.7e-175 619.0 728 47.0
TPR.G32752 Trifolium pratense HOM05D005891 ORTHO05D007214 1.8e-174 617.1 728 47.4
ClCG04G004100 Citrullus lanatus HOM05D005891 ORTHO05D007214 4.8e-172 609.0 745 46.7
Nn7g36464 Nelumbo nucifera HOM05D005891 ORTHO05D007214 8.3e-172 608.2 741 46.0
CANSAT80G2523 Cannabis sativa HOM05D005891 ORTHO05D007214 3.1e-171 606.3 732 46.3
Sc19g0008430 Simmondsia chinensis HOM05D005891 ORTHO05D007214 7.0e-171 605.1 735 45.6
Aqoxy7G02967 Aquilegia oxysepala HOM05D005891 ORTHO05D007214 1.6e-170 604.0 730 45.5
PGR031G3404 Punica granatum HOM05D005891 ORTHO05D007214 1.2e-167 594.3 730 45.2
DCAR_002883 Daucus carota HOM05D005891 ORTHO05D007214 2.3e-166 590.1 660 46.5
Duzib151G0628 Durio zibethinus HOM05D005891 ORTHO05D007214 6.8e-166 588.6 733 45.7
THA.LOC104824423 Tarenaya hassleriana HOM05D005891 ORTHO05D007214 8.9e-166 588.2 735 43.7
CsaV3_4G022060 Cucumis sativus L. HOM05D005891 ORTHO05D007214 1.5e-165 587.4 746 46.0
AL5G38660 Arabidopsis lyrata HOM05D005891 ORTHO05D007214 5.7e-165 585.5 734 43.2
GSVIVG01033562001 Vitis vinifera HOM05D005891 ORTHO05D007214 1.2e-162 577.8 550 54.0
EL10Ac3g07174 Beta vulgaris HOM05D005891 ORTHO05D007214 2.9e-161 573.2 740 45.3
Cfa016743 Carpinus fangiana HOM05D005891 ORTHO05D007214 6.6e-161 572.0 535 55.0
Nn2g15043 Nelumbo nucifera HOM05D005891 ORTHO05D007214 8.6e-161 571.6 744 44.6
Sed0000553 Sechium edule HOM05D005891 ORTHO05D007214 1.9e-160 570.5 736 43.5
PSO063G0854 Papaver somniferum HOM05D005891 ORTHO05D007214 4.3e-160 569.3 749 44.2
A09p50110 Brassica napus HOM05D005891 ORTHO05D007214 5.6e-160 568.9 729 42.4
BraA09t40462Z Brassica rapa HOM05D005891 ORTHO05D007214 5.6e-160 568.9 729 42.4
Ciclev10025261m.g Citrus clementina HOM05D005891 ORTHO05D007214 4.7e-159 565.8 537 54.4
Ah.13g076700 Amaranthus hybridus HOM05D005891 ORTHO05D007214 1.0e-158 564.7 741 44.4
Ciclev10031083m.g Citrus clementina HOM05D005891 ORTHO05D007214 2.2e-156 557.0 537 53.8
BcaC07g40068 Brassica carinata HOM05D005891 ORTHO05D007214 1.4e-155 554.3 731 42.8
PSO170G1429 Papaver somniferum HOM05D005891 ORTHO05D007214 1.4e-155 554.3 743 43.1
BolC8t50864H Brassica oleracea HOM05D005891 ORTHO05D007214 9.2e-155 551.6 729 42.0
Hund19119 Selenicereus undatus HOM05D005891 ORTHO05D007214 9.2e-155 551.6 786 42.1
arahy.Tifrunner.gnm1.ann1.324ZN3 Arachis hypogaea HOM05D005891 ORTHO05D007214 1.2e-154 551.2 789 42.1
MBI16_g31793_MAGBIO Magnolia biondii HOM05D005891 ORTHO05D007214 6.0e-154 548.9 713 44.6
arahy.Tifrunner.gnm1.ann1.68N1MV Arachis hypogaea HOM05D005891 ORTHO05D007214 7.8e-154 548.5 786 41.9
C08p32480 Brassica napus HOM05D005891 ORTHO05D007214 1.0e-153 548.1 728 41.8
ECA246G3700 Erigeron canadensis HOM05D005891 ORTHO05D007214 5.0e-153 545.8 609 49.1
SGA_v2.0_scaffold94G28504 Striga asiatica HOM05D005891 ORTHO05D007214 7.3e-152 542.0 759 43.5
ATR0580G208 Amborella trichopoda HOM05D005891 ORTHO05D007214 4.7e-151 539.3 738 42.7
AUR62026144 Chenopodium quinoa HOM05D005891 ORTHO05D007214 6.8e-150 535.4 697 45.5
Aa31LG10G12080 Aethionema arabicum HOM05D005891 ORTHO05D007214 8.9e-150 535.0 694 43.2
MELO3C014212.2 Cucumis melo HOM05D005891 ORTHO05D007214 8.9e-150 535.0 665 46.5
Psat3g075960 Pisum sativum HOM05D005891 ORTHO05D007214 5.4e-147 525.8 532 53.0
AUR62030390 Chenopodium quinoa HOM05D005891 ORTHO05D007214 7.8e-146 521.9 695 44.9
BcaC07g40040 Brassica carinata HOM05D005891 ORTHO05D007214 1.0e-145 521.5 695 41.9
Gohir.D09G195600 Gossypium hirsutum HOM05D005891 ORTHO05D007214 2.9e-140 503.4 561 49.6
Carub.0005s2399 Capsella rubella HOM05D005891 ORTHO05D007214 1.3e-137 494.6 541 47.5
CARHR119890 Cardamine hirsuta HOM05D005891 ORTHO05D007214 1.1e-136 491.5 541 45.8
Thhalv10005871m.g Eutrema salsugineum HOM05D005891 ORTHO05D007214 1.6e-135 487.6 535 46.7
AT3G57170 Arabidopsis thaliana HOM05D005891 ORTHO05D007214 8.1e-135 485.3 538 45.9
Sp5g05400 Schrenkiella parvula HOM05D005891 ORTHO05D007214 4.0e-134 483.0 539 46.6
HPP92_010949 Vanilla planifolia HOM05D005891 ORTHO05D007214 7.6e-133 478.8 710 40.1
Eucgr.A02290 Eucalyptus grandis HOM05D005891 ORTHO05D007214 1.9e-128 464.2 539 48.2
Zm00001eb364590 Zea mays HOM05D005891 ORTHO05D007214 3.6e-127 459.9 754 37.3
FAN02G2450 Fragaria x ananassa HOM05D005891 ORTHO05D007214 1.1e-123 448.4 521 47.0
CDE08G1332 Ceratophyllum demersum HOM05D005891 ORTHO05D007214 3.9e-121 439.9 676 40.2
VMungo1383G0485 Vigna mungo HOM05D005891 ORTHO05D007214 3.8e-116 423.3 366 58.7
Lj5A499T12 Lonicera japonica HOM05D005891 ORTHO05D007214 1.3e-113 414.8 445 51.0
unitig_748.g7229 Utricularia gibba HOM05D005891 ORTHO05D007214 3.9e-113 413.3 736 37.9
vmacro21952 Vaccinium macrocarpon HOM05D005891 ORTHO05D007214 1.6e-111 407.9 454 48.9
Actinidia09292 Actinidia chinensis HOM05D005891 ORTHO05D007214 4.0e-110 403.3 748 34.9
SEGI_09087 Sequoiadendron giganteum HOM05D005891 ORTHO05D007214 3.5e-106 390.2 612 38.1
MD07G1151600 Malus domestica HOM05D005891 ORTHO05D007214 1.2e-90 338.6 520 40.0
vmacro20338 Vaccinium macrocarpon HOM05D005891 ORTHO05D007214 1.1e-78 298.9 652 33.4
Pp3c24_1230 Physcomitrium patens HOM05D005891 ORTHO05D007214 2.5e-75 287.7 554 35.2
AagrBONN_evm.TU.Sc2ySwM_117.2192 Anthoceros agrestis HOM05D005891 ORTHO05D007214 8.2e-71 272.7 556 33.8
Mapoly0019s0088 Marchantia polymorpha HOM05D005891 ORTHO05D007214 7.7e-69 266.2 465 36.3
Prupe.5G000500 Prunus persica HOM05D005891 ORTHO05D007214 2.4e-62 244.6 227 56.8
SMO367G0314 Selaginella moellendorffii HOM05D005891 ORTHO05D007214 1.0e-57 229.2 515 30.7
Ciclev10013765m.g Citrus clementina HOM05D005891 ORTHO05D007214 9.8e-56 222.6 237 53.6
FAN05G3805 Fragaria x ananassa HOM05D005891 ORTHO05D007214 3.3e-51 207.6 204 53.9
Cpa.g.sc66.74 Carica papaya HOM05D005891 ORTHO05D007214 5.4e-46 190.3 148 62.8
CBR_g4216 Chara braunii HOM05D000019 ORTHO05D000048 7.0e-46 189.9 248 42.3
Os05g0290300 Oryza sativa ssp. japonica HOM05D005891 ORTHO05D007214 1.4e-41 175.6 211 45.0
MD07G1151500 Malus domestica HOM05D005891 ORTHO05D007214 3.7e-39 167.5 227 45.4
VMungo1383G2003 Vigna mungo HOM05D005891 ORTHO05D007214 4.6e-37 160.6 297 37.0
QL07p005099 Quercus lobata HOM05D005891 ORTHO05D007214 5.6e-35 153.7 142 58.5
Lj5C499G2 Lonicera japonica HOM05D005891 ORTHO05D007214 9.5e-35 152.9 208 43.8
Cfa022822 Carpinus fangiana HOM05D005891 ORTHO05D007214 4.1e-22 110.9 336 27.7
CSS0027694 Camellia sinensis var. sinensis HOM05D005891 ORTHO05D007214 3.0e-20 104.8 110 46.4
TWI74G1459 Tripterygium wilfordii HOM05D005891 ORTHO05D007214 3.0e-20 104.8 148 38.5
Glyma.19G133702 Glycine max HOM05D005891 ORTHO05D007214 2.9e-15 88.2 206 30.6
Actinidia39189 Actinidia chinensis HOM05D005891 ORTHO05D007214 6.4e-15 87.0 97 41.2
FAN02G2483 Fragaria x ananassa HOM05D005891 ORTHO05D007214 1.4e-14 85.9 86 46.5
C04p35350 Brassica napus HOM05D005891 ORTHO05D032421 4.6e-13 80.9 272 27.9
BolC4t25089H Brassica oleracea HOM05D005891 ORTHO05D032421 4.6e-13 80.9 272 27.9
BcaC02g09903 Brassica carinata HOM05D005891 ORTHO05D032421 1.5e-11 75.9 108 38.9
Actinidia39187 Actinidia chinensis HOM05D005891 ORTHO05D007214 9.0e-09 66.6 68 44.1


User provided reference genes

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