Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g18410 Coffea canephora HOM05D005255 ORTHO05D006276 0.0e+00 1311.2 657 100.0
CSS0035930 Camellia sinensis var. sinensis HOM05D005255 ORTHO05D006276 9.5e-204 714.1 651 59.3
Actinidia38145 Actinidia chinensis HOM05D005255 ORTHO05D006276 2.2e-200 703.0 654 57.5
Rhsim04G0108300 Rhododendron simsii HOM05D005255 ORTHO05D006276 2.4e-194 682.9 647 56.9
Sopen04g008740 Solanum pennellii HOM05D005255 ORTHO05D006276 5.8e-193 678.3 645 56.0
Dinv30292 Davidia involucrata HOM05D005255 ORTHO05D006276 1.3e-192 677.2 650 58.3
CiPaw.09G042700 Carya illinoinensis HOM05D005255 ORTHO05D006276 1.7e-192 676.8 660 56.7
Oeu008184.2 Olea europaea HOM05D005255 ORTHO05D006276 1.1e-191 674.1 660 55.9
Solyc04g017650.4 Solanum lycopersicum HOM05D005255 ORTHO05D006276 4.2e-191 672.2 645 56.0
Haze_19754 Corylus avellana HOM05D005255 ORTHO05D006276 5.4e-191 671.8 652 56.6
Lj1A1118T28 Lonicera japonica HOM05D005255 ORTHO05D006276 9.3e-191 671.0 580 60.0
Migut.J01697 Erythranthe guttata HOM05D005255 ORTHO05D006276 1.1e-188 664.1 647 55.2
Cfa016749 Carpinus fangiana HOM05D005255 ORTHO05D006276 9.6e-188 661.0 656 55.3
Manes.09G016500 Manihot esculenta HOM05D005255 ORTHO05D006276 6.2e-187 658.3 676 53.8
Manes.09G016721 Manihot esculenta HOM05D005255 ORTHO05D006276 1.8e-186 656.8 677 54.5
Atru.chr1.1248 Acer truncatum HOM05D005255 ORTHO05D006276 4.0e-186 655.6 659 54.6
ECA236G0023 Erigeron canadensis HOM05D005255 ORTHO05D006276 9.0e-186 654.4 648 54.2
QL07p004453 Quercus lobata HOM05D005255 ORTHO05D006276 9.0e-186 654.4 610 57.4
Prupe.7G049600 Prunus persica HOM05D005255 ORTHO05D006276 1.5e-185 653.7 676 54.9
Lj1C1121T6 Lonicera japonica HOM05D005255 ORTHO05D006276 1.4e-183 647.1 557 60.1
SalBow6G4730 Salvia bowleyana HOM05D005255 ORTHO05D006276 1.6e-182 643.7 653 55.7
Nitab4.5_0005195g0020 Nicotiana tabacum HOM05D005255 ORTHO05D006276 3.9e-181 639.0 632 55.1
Peaxi162Scf00130g01019 Petunia axillaris HOM05D005255 ORTHO05D006276 1.1e-180 637.5 639 54.9
CAN.G1237.20 Capsicum annuum HOM05D005255 ORTHO05D006276 9.6e-180 634.4 597 56.3
Thecc.05G144600 Theobroma cacao HOM05D005255 ORTHO05D006276 2.8e-179 632.9 670 51.6
Eucgr.A02293 Eucalyptus grandis HOM05D005255 ORTHO05D006276 3.7e-179 632.5 658 52.0
Sabra06G0031000 Salix brachista HOM05D005255 ORTHO05D006276 1.8e-178 630.2 655 53.4
Duzib093G1389 Durio zibethinus HOM05D005255 ORTHO05D006276 1.5e-177 627.1 677 51.3
Nn7g36447 Nelumbo nucifera HOM05D005255 ORTHO05D006276 2.2e-176 623.2 682 50.9
HanXRQChr06g0176811 Helianthus annuus HOM05D005255 ORTHO05D006276 6.4e-176 621.7 642 51.7
DCAR_020535 Daucus carota HOM05D005255 ORTHO05D006276 1.1e-175 620.9 652 51.2
CANSAT80G1558 Cannabis sativa HOM05D005255 ORTHO05D006276 7.1e-175 618.2 706 49.3
TWI74G1492 Tripterygium wilfordii HOM05D005255 ORTHO05D006276 2.1e-174 616.7 643 52.6
COL.COLO4_21290 Corchorus olitorius HOM05D005255 ORTHO05D006276 1.8e-173 613.6 668 51.3
PSO339G5261 Papaver somniferum HOM05D005255 ORTHO05D006276 2.0e-169 600.1 668 50.4
GSVIVG01033557001 Vitis vinifera HOM05D005255 ORTHO05D006276 4.5e-169 599.0 661 51.3
RcHm_v2.0_Chr3g0484561 Rosa chinensis HOM05D005255 ORTHO05D006276 3.8e-168 595.9 644 51.7
PGR031G1801 Punica granatum HOM05D005255 ORTHO05D006276 1.1e-167 594.3 611 52.4
Medtr7g090680 Medicago truncatula HOM05D005255 ORTHO05D006276 3.2e-167 592.8 665 50.1
Ciclev10006800m.g Citrus clementina HOM05D005255 ORTHO05D006276 1.1e-164 584.3 644 52.3
Glyma.03G132200 Glycine max HOM05D005255 ORTHO05D006276 1.1e-164 584.3 668 50.4
ClCG04G003970 Citrullus lanatus HOM05D005255 ORTHO05D006276 1.5e-164 583.9 612 52.5
Sed0023795 Sechium edule HOM05D005255 ORTHO05D006276 1.5e-164 583.9 603 53.6
Lj1g0022872 Lotus japonicus HOM05D005255 ORTHO05D006276 1.9e-164 583.6 658 49.2
Nitab4.5_0011420g0030 Nicotiana tabacum HOM05D005255 ORTHO05D006276 3.3e-164 582.8 702 48.7
arahy.Tifrunner.gnm1.ann1.FQMP84 Arachis hypogaea HOM05D005255 ORTHO05D006276 6.3e-163 578.6 663 48.1
Glyma.19G134000 Glycine max HOM05D005255 ORTHO05D006276 8.2e-163 578.2 658 51.1
Phvul.001G128100 Phaseolus vulgaris HOM05D005255 ORTHO05D006276 4.1e-162 575.9 638 51.3
VMungo1383G2357 Vigna mungo HOM05D005255 ORTHO05D006276 4.1e-162 575.9 641 50.9
arahy.Tifrunner.gnm1.ann1.5V2BX3 Arachis hypogaea HOM05D005255 ORTHO05D006276 9.0e-162 574.7 669 47.5
CANSAT80G0695 Cannabis sativa HOM05D005255 ORTHO05D006276 1.3e-160 570.9 599 52.6
AUR62030394 Chenopodium quinoa HOM05D005255 ORTHO05D006276 3.8e-160 569.3 649 49.9
Psat3g075800 Pisum sativum HOM05D005255 ORTHO05D006276 5.0e-160 568.9 643 50.2
Potri.006G045100 Populus trichocarpa HOM05D005255 ORTHO05D006276 8.5e-160 568.2 573 54.1
EL10Ac3g07169 Beta vulgaris HOM05D005255 ORTHO05D006276 4.2e-159 565.8 653 49.6
AUR62026140 Chenopodium quinoa HOM05D005255 ORTHO05D006276 1.0e-157 561.2 679 48.7
Lsat_1_v5_gn_8_83080 Lactuca sativa HOM05D005255 ORTHO05D006276 1.0e-157 561.2 571 52.0
TAR623G1148 Trochodendron aralioides HOM05D005255 ORTHO05D006276 5.1e-157 558.9 679 48.2
Hund24659 Selenicereus undatus HOM05D005255 ORTHO05D006276 1.1e-156 557.8 666 48.6
Aqoxy2G00272 Aquilegia oxysepala HOM05D005255 ORTHO05D006276 5.7e-156 555.4 688 46.5
Lalb_Chr25g0287041 Lupinus albus HOM05D005255 ORTHO05D006276 4.8e-155 552.4 670 46.6
THA.LOC104817056 Tarenaya hassleriana HOM05D005255 ORTHO05D006276 3.4e-153 546.2 652 48.9
SGA_v2.0_scaffold105G30345 Striga asiatica HOM05D005255 ORTHO05D006276 3.8e-152 542.7 699 46.6
Thhalv10016390m.g Eutrema salsugineum HOM05D005255 ORTHO05D006276 7.2e-151 538.5 627 47.2
Ah.13g076740 Amaranthus hybridus HOM05D005255 ORTHO05D006276 2.1e-150 537.0 667 46.6
TPR.G32740 Trifolium pratense HOM05D005255 ORTHO05D006276 5.1e-149 532.3 681 45.2
Sp4g23710 Schrenkiella parvula HOM05D005255 ORTHO05D006276 1.1e-148 531.2 626 46.8
MELO3C014208.2 Cucumis melo HOM05D005255 ORTHO05D006276 2.2e-147 526.9 602 49.2
AT2G41450 Arabidopsis thaliana HOM05D005255 ORTHO05D006276 1.1e-146 524.6 633 46.3
CARHR136560 Cardamine hirsuta HOM05D005255 ORTHO05D006276 2.4e-146 523.5 629 46.4
AL4G39520 Arabidopsis lyrata HOM05D005255 ORTHO05D006276 5.3e-146 522.3 636 46.7
CDE08G0636 Ceratophyllum demersum HOM05D005255 ORTHO05D006276 2.6e-145 520.0 630 46.3
Aa31LG1G23460 Aethionema arabicum HOM05D005255 ORTHO05D006276 2.7e-142 510.0 648 44.1
MBI19_g17528_MAGBIO Magnolia biondii HOM05D005255 ORTHO05D006276 3.9e-141 506.1 727 43.9
Carub.0004s2374 Capsella rubella HOM05D005255 ORTHO05D006276 1.8e-138 497.3 598 47.8
Zm00001eb286800 Zea mays HOM05D005255 ORTHO05D006276 1.7e-136 490.7 634 43.2
BraA05t19224Z Brassica rapa HOM05D005255 ORTHO05D006276 6.1e-134 482.3 593 45.4
ATR0721G141 Amborella trichopoda HOM05D005255 ORTHO05D006276 1.7e-131 474.2 780 39.1
C04p02730 Brassica napus HOM05D005255 ORTHO05D006276 2.2e-131 473.8 588 45.4
BolC4t21913H Brassica oleracea HOM05D005255 ORTHO05D006276 2.2e-131 473.8 588 45.4
BcaC02g12783 Brassica carinata HOM05D005255 ORTHO05D006276 2.8e-131 473.4 587 45.1
A05p02290 Brassica napus HOM05D005255 ORTHO05D006276 6.3e-131 472.2 619 43.8
Ca_08423_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 1.4e-130 471.1 580 45.9
Os05g0376600 Oryza sativa ssp. japonica HOM05D005255 ORTHO05D006276 2.9e-128 463.4 630 41.7
TAR624G0617 Trochodendron aralioides HOM05D005255 ORTHO05D006276 2.9e-128 463.4 527 50.1
TAR623G1440 Trochodendron aralioides HOM05D005255 ORTHO05D006276 3.6e-126 456.4 603 45.1
VMungo1383G1524 Vigna mungo HOM05D005255 ORTHO05D006276 1.8e-125 454.1 596 45.1
Cpa.g.sc120.15 Carica papaya HOM05D005255 ORTHO05D006276 1.5e-119 434.5 543 48.6
HPP92_003251 Vanilla planifolia HOM05D005255 ORTHO05D006276 4.4e-116 422.9 581 42.3
FvH4_6g24820 Fragaria vesca HOM05D005255 ORTHO05D006276 1.8e-114 417.5 521 48.0
PGSC0003DMG400012725 Solanum tuberosum HOM05D005255 ORTHO05D006276 4.6e-97 359.8 306 59.5
Nitab4.5_0000826g0020 Nicotiana tabacum HOM05D005255 ORTHO05D006276 3.7e-91 340.1 410 48.5
Sc13g0001470 Simmondsia chinensis HOM05D005255 ORTHO05D006276 2.1e-89 334.3 490 43.9
FAN14G1086 Fragaria x ananassa HOM05D005255 ORTHO05D006276 1.2e-84 318.5 552 39.5
AagrBONN_evm.TU.Sc2ySwM_228.5074 Anthoceros agrestis HOM05D005255 ORTHO05D006276 1.7e-80 304.7 801 29.8
Pp3c8_2040 Physcomitrium patens HOM05D005255 ORTHO05D006276 8.4e-75 285.8 759 29.0
RcHm_v2.0_Chr3g0484121 Rosa chinensis HOM05D005255 ORTHO05D006276 1.4e-74 285.0 198 66.2
CsaV3_4G021950 Cucumis sativus L. HOM05D005255 ORTHO05D006276 6.2e-70 269.6 198 66.2
CAN.G1237.18 Capsicum annuum HOM05D005255 ORTHO05D006276 8.4e-67 259.2 207 62.3
Pp3c4_1630 Physcomitrium patens HOM05D005255 ORTHO05D006276 5.4e-66 256.5 874 27.3
Pp3c4_1631 Physcomitrium patens HOM05D005255 ORTHO05D006276 5.4e-66 256.5 874 27.3
MSTRG.6398 Avicennia marina HOM05D005255 ORTHO05D006276 3.5e-65 253.8 176 67.6
Mapoly0085s0026 Marchantia polymorpha HOM05D005255 ORTHO05D006276 2.3e-64 251.1 1059 25.3
unitig_8.g3497 Utricularia gibba HOM05D005255 ORTHO05D006276 2.8e-62 244.2 228 54.8
MSTRG.6397 Avicennia marina HOM05D005255 ORTHO05D006276 7.4e-55 219.5 307 46.6
SEGI_00937 Sequoiadendron giganteum HOM05D005255 ORTHO05D006276 4.8e-54 216.9 177 55.9
vmacro09038 Vaccinium macrocarpon HOM05D005255 ORTHO05D006276 9.0e-53 212.6 145 68.3
HPP92_003249 Vanilla planifolia HOM05D005255 ORTHO05D006276 1.1e-50 205.7 352 38.1
FAN02G3622 Fragaria x ananassa HOM05D005255 ORTHO05D006276 2.5e-47 194.5 386 38.6
vmacro09037 Vaccinium macrocarpon HOM05D005255 ORTHO05D006276 2.5e-47 194.5 294 43.2
PGSC0003DMG400012726 Solanum tuberosum HOM05D005255 ORTHO05D006276 1.1e-45 189.1 195 52.3
unitig_8.g3496 Utricularia gibba HOM05D005255 ORTHO05D006276 1.4e-45 188.7 391 35.8
Nitab4.5_0001618g0070 Nicotiana tabacum HOM05D005255 ORTHO05D006276 2.7e-41 174.5 124 66.9
Sopen04g008710 Solanum pennellii HOM05D005255 ORTHO05D006276 8.8e-40 169.5 124 64.5
Lsat_1_v5_gn_8_83120 Lactuca sativa HOM05D005255 ORTHO05D006276 3.6e-33 147.5 184 44.0
SMO364G0001 Selaginella moellendorffii HOM05D005255 ORTHO05D006276 3.0e-32 144.4 208 36.5
TAR628G1157 Trochodendron aralioides HOM05D005255 ORTHO05D006276 2.0e-31 141.7 102 65.7
RcHm_v2.0_Chr3g0484111 Rosa chinensis HOM05D005255 ORTHO05D006276 9.1e-29 132.9 96 66.7
Ca_30365_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 1.5e-28 132.1 83 69.9
Ca_08424_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 3.5e-28 131.0 104 64.4
FAN14G4897 Fragaria x ananassa HOM05D005255 ORTHO05D006276 3.5e-28 131.0 137 47.4
Dinv30288 Davidia involucrata HOM05D007529 ORTHO05D007451 4.2e-26 124.0 166 46.4
Ca_20730_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 2.1e-25 121.7 91 60.4
vmacro09036 Vaccinium macrocarpon HOM05D005255 ORTHO05D006276 8.0e-25 119.8 80 68.8
SEGI_13590 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 5.2e-24 117.1 87 56.3
RcHm_v2.0_Chr1g0374991 Rosa chinensis HOM05D005255 ORTHO05D006276 1.3e-22 112.5 71 74.6
Lsat_1_v5_gn_5_6521 Lactuca sativa HOM05D005255 ORTHO05D006276 4.8e-22 110.5 94 51.1
Nitab4.5_0000826g0030 Nicotiana tabacum HOM05D005255 ORTHO05D006276 1.2e-20 105.9 60 78.3
SEGI_39771 Sequoiadendron giganteum HOM05D005255 ORTHO05D006276 1.0e-19 102.8 81 54.3
Ca_13718_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 1.2e-17 95.9 213 34.7
SEGI_06354 Sequoiadendron giganteum HOM05D005255 ORTHO05D006276 6.1e-17 93.6 71 70.4
Pp3c12_23820 Physcomitrium patens HOM05D005255 ORTHO05D006276 2.3e-16 91.7 75 53.3
SEGI_33554 Sequoiadendron giganteum HOM05D002556 ORTHO05D003153 9.7e-15 86.3 199 25.6
TAR624G0532 Trochodendron aralioides HOM05D005255 ORTHO05D006276 4.8e-14 84.0 59 66.1
CAN.G1237.19 Capsicum annuum HOM05D005255 ORTHO05D006276 8.3e-14 83.2 63 63.5
TWI59G0842 Tripterygium wilfordii HOM05D002556 ORTHO05D003153 3.5e-12 77.8 182 26.9
Sc24g0003990 Simmondsia chinensis HOM05D002556 ORTHO05D003153 1.0e-11 76.3 213 25.4
TWI59G0577 Tripterygium wilfordii HOM05D002556 ORTHO05D003153 1.0e-11 76.3 182 26.4
AL6G49810 Arabidopsis lyrata HOM05D002556 ORTHO05D003153 1.7e-11 75.5 194 25.3
AT4G03130 Arabidopsis thaliana HOM05D002556 ORTHO05D003153 2.2e-11 75.1 194 25.8
FAN17G1599 Fragaria x ananassa HOM05D002556 ORTHO05D003153 1.9e-10 72.0 202 23.3
BolSC21t60285H Brassica oleracea HOM05D005255 ORTHO05D021741 2.5e-10 71.6 81 43.2
Rhsim04G0215200 Rhododendron simsii HOM05D002556 ORTHO05D003153 4.2e-10 70.9 179 25.7
HanXRQChr03g0079431 Helianthus annuus HOM05D002556 ORTHO05D003153 5.5e-10 70.5 181 26.0
CDE12G0271 Ceratophyllum demersum HOM05D002556 ORTHO05D003153 9.4e-10 69.7 197 23.9
Zm00001eb417970 Zea mays HOM05D002556 ORTHO05D003153 9.4e-10 69.7 195 25.1
PGR031G1073 Punica granatum HOM05D002556 ORTHO05D003153 1.6e-09 68.9 288 21.9
Oeu047907.1 Olea europaea HOM05D002556 ORTHO05D003153 2.1e-09 68.6 181 24.9
Ah.08g212730 Amaranthus hybridus HOM05D002556 ORTHO05D008572 3.6e-09 67.8 179 25.1
SMO364G0772 Selaginella moellendorffii HOM05D005255 ORTHO05D006276 1.0e-08 66.2 159 28.9
QL12p023870 Quercus lobata HOM05D002556 ORTHO05D003153 1.4e-08 65.9 205 23.4
BcaB04g19772 Brassica carinata HOM05D005255 ORTHO05D021741 2.3e-08 65.1 49 61.2
C03p67440 Brassica napus HOM05D005255 ORTHO05D021741 1.2e-07 62.8 49 59.2
C03p67420 Brassica napus HOM05D005255 ORTHO05D021741 5.7e-07 60.5 49 57.1
CSS0031733 Camellia sinensis var. sinensis HOM05D002556 ORTHO05D003153 9.8e-07 59.7 201 23.9


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