Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g18080 Coffea canephora HOM05D007492 ORTHO05D009510 2.9e-46 188.3 103 100.0
Oeu023131.1 Olea europaea HOM05D007492 ORTHO05D009510 5.6e-26 120.9 104 66.3
SalBow6G0030 Salvia bowleyana HOM05D007492 ORTHO05D009510 5.6e-26 120.9 100 66.0
SalBow6G0474 Salvia bowleyana HOM05D007492 ORTHO05D009510 5.6e-26 120.9 100 66.0
MSTRG.19841 Avicennia marina HOM05D007492 ORTHO05D009510 3.6e-25 118.2 100 65.0
TAR636G3489 Trochodendron aralioides HOM05D007492 ORTHO05D009510 4.0e-24 114.8 98 64.3
Rhsim04G0106100 Rhododendron simsii HOM05D007492 ORTHO05D009510 5.2e-24 114.4 100 65.0
Dinv39655 Davidia involucrata HOM05D007492 ORTHO05D009510 4.4e-23 111.3 104 65.4
Hma1.2p1_0005F.1_g004460 Hydrangea macrophylla HOM05D007492 ORTHO05D009510 7.6e-23 110.5 104 64.4
Cfa016781 Carpinus fangiana HOM05D007492 ORTHO05D009510 1.4e-21 106.3 100 63.0
SGA_v2.0_scaffold105G30374 Striga asiatica HOM05D007492 ORTHO05D009510 3.2e-21 105.1 100 59.0
Actinidia38130 Actinidia chinensis HOM05D007492 ORTHO05D009510 7.1e-21 104.0 102 56.9
Potri.006G046800 Populus trichocarpa HOM05D007492 ORTHO05D009510 2.7e-20 102.1 99 56.6
Manes.08G052300 Manihot esculenta HOM05D007492 ORTHO05D009510 1.3e-19 99.8 98 59.2
Sabra06G0032400 Salix brachista HOM05D007492 ORTHO05D009510 2.3e-19 99.0 99 56.6
GSVIVG01033234001 Vitis vinifera HOM05D007492 ORTHO05D009510 2.3e-19 99.0 85 58.8
DCAR_013612 Daucus carota HOM05D007492 ORTHO05D009510 3.9e-19 98.2 100 55.0
arahy.Tifrunner.gnm1.ann1.BXP26X Arachis hypogaea HOM05D007492 ORTHO05D009510 5.1e-19 97.8 97 59.8
ECA248G1814 Erigeron canadensis HOM05D007492 ORTHO05D009510 1.9e-18 95.9 102 53.9
PGR004G0419 Punica granatum HOM05D007492 ORTHO05D009510 1.9e-18 95.9 102 53.9
QL07p003630 Quercus lobata HOM05D007492 ORTHO05D009510 1.9e-18 95.9 97 57.7
arahy.Tifrunner.gnm1.ann1.7L65TE Arachis hypogaea HOM05D007492 ORTHO05D009510 2.5e-18 95.5 97 57.7
Peaxi162Scf00130g00832 Petunia axillaris HOM05D007492 ORTHO05D009510 3.3e-18 95.1 104 57.7
ATR0721G123 Amborella trichopoda HOM05D007492 ORTHO05D009510 4.3e-18 94.7 103 52.4
Lsat_1_v5_gn_5_160860 Lactuca sativa HOM05D007492 ORTHO05D009510 7.3e-18 94.0 95 56.8
Migut.J01728 Erythranthe guttata HOM05D007492 ORTHO05D009510 9.6e-18 93.6 93 58.1
Gohir.D09G117400 Gossypium hirsutum HOM05D007492 ORTHO05D009510 9.6e-18 93.6 93 59.1
Solyc04g150113.1 Solanum lycopersicum HOM05D007492 ORTHO05D009510 9.6e-18 93.6 100 55.0
TWI77G0158 Tripterygium wilfordii HOM05D007492 ORTHO05D009510 9.6e-18 93.6 97 55.7
PGSC0003DMG400012711 Solanum tuberosum HOM05D007492 ORTHO05D009510 1.3e-17 93.2 100 54.0
Gorai.006G135800 Gossypium raimondii HOM05D007492 ORTHO05D009510 1.6e-17 92.8 93 59.1
CANSAT80G1179 Cannabis sativa HOM05D007492 ORTHO05D009510 2.1e-17 92.4 94 58.5
CDE04G0450 Ceratophyllum demersum HOM05D007492 ORTHO05D009510 2.1e-17 92.4 95 55.8
Sopen04g008400 Solanum pennellii HOM05D007492 ORTHO05D009510 2.1e-17 92.4 100 55.0
CiPaw.10G035300 Carya illinoinensis HOM05D007492 ORTHO05D009510 3.6e-17 91.7 97 56.7
Gohir.A09G121300 Gossypium hirsutum HOM05D007492 ORTHO05D009510 4.8e-17 91.3 93 59.1
CANSAT80G0939 Cannabis sativa HOM05D007492 ORTHO05D009510 6.2e-17 90.9 94 57.4
Glyma.10G107400 Glycine max HOM05D007492 ORTHO05D009510 6.2e-17 90.9 91 59.3
vmacro09057 Vaccinium macrocarpon HOM05D007492 ORTHO05D009510 8.1e-17 90.5 83 60.2
Hund19134 Selenicereus undatus HOM05D007492 ORTHO05D009510 1.1e-16 90.1 104 51.9
Nitab4.5_0000826g0210 Nicotiana tabacum HOM05D007492 ORTHO05D009510 1.4e-16 89.7 104 54.8
Prupe.7G053700 Prunus persica HOM05D007492 ORTHO05D009510 1.4e-16 89.7 103 54.4
Sc19g0006630 Simmondsia chinensis HOM05D007492 ORTHO05D009510 1.8e-16 89.4 93 55.9
Duzib106G1025 Durio zibethinus HOM05D007492 ORTHO05D009510 2.4e-16 89.0 94 54.3
Thecc.05G151900 Theobroma cacao HOM05D007492 ORTHO05D009510 4.0e-16 88.2 94 56.4
HanXRQChr13g0395971 Helianthus annuus HOM05D007492 ORTHO05D009510 5.3e-16 87.8 94 54.3
Psat0s33g0080 Pisum sativum HOM05D007492 ORTHO05D009510 5.3e-16 87.8 97 54.6
Ca_12247_v3 Cicer arietinum L. HOM05D007492 ORTHO05D009510 1.5e-15 86.3 97 53.6
Lj5g0022766 Lotus japonicus HOM05D007492 ORTHO05D009510 2.6e-15 85.5 91 57.1
MD12G1082300 Malus domestica HOM05D007492 ORTHO05D009510 2.6e-15 85.5 104 53.8
Phvul.007G250800 Phaseolus vulgaris HOM05D007492 ORTHO05D009510 4.4e-15 84.7 105 50.5
BcaB02g07611 Brassica carinata HOM05D007492 ORTHO05D009510 5.8e-15 84.3 101 51.5
Eucgr.K01714 Eucalyptus grandis HOM05D007492 ORTHO05D009510 3.8e-14 81.6 106 47.2
Eucgr.K02018 Eucalyptus grandis HOM05D007492 ORTHO05D009510 3.8e-14 81.6 106 47.2
Atru.chr1.1236 Acer truncatum HOM05D007492 ORTHO05D009510 4.9e-14 81.3 92 52.2
Lalb_Chr21g0316561 Lupinus albus HOM05D007492 ORTHO05D009510 4.9e-14 81.3 97 48.5
Medtr1g052270 Medicago truncatula HOM05D007492 ORTHO05D009510 6.4e-14 80.9 97 53.6
AagrBONN_evm.TU.Sc2ySwM_228.377 Anthoceros agrestis HOM05D007492 ORTHO05D009510 1.1e-13 80.1 98 46.9
RcHm_v2.0_Chr3g0483561 Rosa chinensis HOM05D007492 ORTHO05D009510 1.1e-13 80.1 98 50.0
Sed0027371 Sechium edule HOM05D007492 ORTHO05D009510 1.1e-13 80.1 99 51.5
BolC6t37587H Brassica oleracea HOM05D007492 ORTHO05D009510 1.9e-13 79.3 100 50.0
ClCG04G003670 Citrullus lanatus HOM05D007492 ORTHO05D009510 1.9e-13 79.3 92 48.9
HPP92_012476 Vanilla planifolia HOM05D007492 ORTHO05D009510 1.9e-13 79.3 93 49.5
BraA07t29999Z Brassica rapa HOM05D007492 ORTHO05D009510 2.4e-13 79.0 99 49.5
FAN02G2710 Fragaria x ananassa HOM05D007492 ORTHO05D009510 2.4e-13 79.0 97 50.5
TPR.G19665 Trifolium pratense HOM05D007492 ORTHO05D009510 2.4e-13 79.0 115 46.1
A07p23340 Brassica napus HOM05D007492 ORTHO05D009510 3.2e-13 78.6 100 49.0
FAN14G3877 Fragaria x ananassa HOM05D007492 ORTHO05D009510 4.2e-13 78.2 107 49.5
BcaC08g44833 Brassica carinata HOM05D007492 ORTHO05D009510 5.4e-13 77.8 100 49.0
C06p24390 Brassica napus HOM05D007492 ORTHO05D009510 5.4e-13 77.8 100 49.0
HPP92_012551 Vanilla planifolia HOM05D007492 ORTHO05D009510 5.4e-13 77.8 93 48.4
FAN05G0111 Fragaria x ananassa HOM05D007492 ORTHO05D009510 1.6e-12 76.3 95 50.5
AUR62026094 Chenopodium quinoa HOM05D007492 ORTHO05D009510 2.1e-12 75.9 100 50.0
THA.LOC104802018 Tarenaya hassleriana HOM05D007492 ORTHO05D009510 2.7e-12 75.5 95 48.4
Haze_19797 Corylus avellana HOM05D007492 ORTHO05D009510 3.5e-12 75.1 128 45.3
AL5G38860 Arabidopsis lyrata HOM05D007492 ORTHO05D009510 4.6e-12 74.7 97 47.4
CARHR167510 Cardamine hirsuta HOM05D007492 ORTHO05D009510 4.6e-12 74.7 95 50.5
Haze_19793 Corylus avellana HOM05D007492 ORTHO05D009510 1.0e-11 73.6 128 44.5
Os07g0661700 Oryza sativa ssp. japonica HOM05D007492 ORTHO05D009510 1.7e-11 72.8 97 47.4
Sp5g05280 Schrenkiella parvula HOM05D007492 ORTHO05D009510 1.7e-11 72.8 97 48.5
Ciclev10005969m.g Citrus clementina HOM05D007492 ORTHO05D009510 2.3e-11 72.4 143 39.9
Zm00001eb329920 Zea mays HOM05D007492 ORTHO05D009510 2.3e-11 72.4 97 47.4
Carub.0005s2417 Capsella rubella HOM05D007492 ORTHO05D009510 3.9e-11 71.6 97 46.4
Mapoly0061s0071 Marchantia polymorpha HOM05D007492 ORTHO05D009510 7.3e-10 67.4 98 40.8
Aqoxy2G00252 Aquilegia oxysepala HOM05D007492 ORTHO05D009510 2.8e-09 65.5 94 42.6
Cpa.g.sc1210.1 Carica papaya HOM05D007492 ORTHO05D009510 2.8e-09 65.5 77 50.6
Nitab4.5_0001618g0280 Nicotiana tabacum HOM05D007492 ORTHO05D009510 3.6e-09 65.1 81 50.6
Pp3c18_6860 Physcomitrium patens HOM05D007492 ORTHO05D009510 8.1e-09 63.9 99 42.4
Aa31LG10G12190 Aethionema arabicum HOM05D007492 ORTHO05D009510 1.4e-08 63.2 93 44.1
MBI13_g15315_MAGBIO Magnolia biondii HOM05D007492 ORTHO05D009510 9.0e-08 60.5 149 32.9
MBI13_g30326_MAGBIO Magnolia biondii HOM05D007492 ORTHO05D009510 4.9e-06 54.7 78 44.9
EL10Ac3g07135 Beta vulgaris HOM05D007492 ORTHO05D009510 6.4e-06 54.3 100 41.0


User provided reference genes

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