Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g16890 Coffea canephora HOM05D007341 ORTHO05D009075 8.1e-100 367.1 185 100.0
Prupe.3G028000 Prunus persica HOM05D007341 ORTHO05D009075 3.3e-45 185.7 163 61.3
CiPaw.01G092200 Carya illinoinensis HOM05D007341 ORTHO05D009075 4.3e-45 185.3 144 71.5
Duzib235G0177 Durio zibethinus HOM05D007341 ORTHO05D009075 5.7e-45 184.9 129 75.2
Gorai.009G121500 Gossypium raimondii HOM05D007341 ORTHO05D009075 9.7e-45 184.1 129 74.4
Gohir.A05G116700 Gossypium hirsutum HOM05D007341 ORTHO05D009075 1.3e-44 183.7 129 74.4
Haze_16246 Corylus avellana HOM05D007341 ORTHO05D009075 1.6e-44 183.3 123 74.8
Gohir.D05G117600 Gossypium hirsutum HOM05D007341 ORTHO05D009075 1.6e-44 183.3 129 73.6
TWI12G0959 Tripterygium wilfordii HOM05D007341 ORTHO05D009075 2.2e-44 183.0 117 76.9
Sabra07G0002700 Salix brachista HOM05D007341 ORTHO05D009075 2.8e-44 182.6 134 71.6
QL05p085130 Quercus lobata HOM05D007341 ORTHO05D009075 3.7e-44 182.2 157 61.1
Nitab4.5_0000349g0220 Nicotiana tabacum HOM05D007341 ORTHO05D009075 1.4e-43 180.3 170 57.1
CSS0015626 Camellia sinensis var. sinensis HOM05D007341 ORTHO05D009075 1.8e-43 179.9 160 62.5
MELO3C019561.2 Cucumis melo HOM05D007341 ORTHO05D009075 3.1e-43 179.1 104 80.8
TAR636G1203 Trochodendron aralioides HOM05D007341 ORTHO05D009075 3.1e-43 179.1 115 73.9
GSVIVG01029444001 Vitis vinifera HOM05D007341 ORTHO05D009075 3.1e-43 179.1 115 77.4
Thecc.06G049400 Theobroma cacao HOM05D007341 ORTHO05D009075 5.3e-43 178.3 129 72.9
MD09G1169800 Malus domestica HOM05D007341 ORTHO05D009075 6.9e-43 177.9 106 78.3
CsaV3_3G018050 Cucumis sativus L. HOM05D007341 ORTHO05D009075 9.1e-43 177.6 97 84.5
Sed0003722 Sechium edule HOM05D007341 ORTHO05D009075 9.1e-43 177.6 104 81.7
Solyc10g086470.2 Solanum lycopersicum HOM05D007341 ORTHO05D009075 9.1e-43 177.6 142 67.6
PGSC0003DMG400019203 Solanum tuberosum HOM05D007341 ORTHO05D009075 2.0e-42 176.4 156 63.5
Cfa002160 Carpinus fangiana HOM05D007341 ORTHO05D009075 3.4e-42 175.6 130 72.3
Dinv20313 Davidia involucrata HOM05D007341 ORTHO05D009075 3.4e-42 175.6 125 74.4
Ciclev10029418m.g Citrus clementina HOM05D007341 ORTHO05D009075 4.5e-42 175.3 99 78.8
Sopen10g035850 Solanum pennellii HOM05D007341 ORTHO05D009075 4.5e-42 175.3 142 66.9
THA.LOC104808109 Tarenaya hassleriana HOM05D007341 ORTHO05D009075 7.7e-42 174.5 127 71.7
Potri.007G003600 Populus trichocarpa HOM05D007341 ORTHO05D009075 5.0e-41 171.8 135 68.1
HanXRQChr03g0072101 Helianthus annuus HOM05D007341 ORTHO05D009075 1.4e-40 170.2 100 79.0
Eucgr.F04060 Eucalyptus grandis HOM05D007341 ORTHO05D009075 1.9e-40 169.9 124 71.8
RcHm_v2.0_Chr2g0148351 Rosa chinensis HOM05D007341 ORTHO05D009075 1.9e-40 169.9 107 72.9
FAN02G2832 Fragaria x ananassa HOM05D007341 ORTHO05D009075 2.5e-40 169.5 133 63.2
Hma1.2p1_0422F.1_g150100 Hydrangea macrophylla HOM05D007341 ORTHO05D009075 2.5e-40 169.5 126 65.9
FvH4_6g36350 Fragaria vesca HOM05D007341 ORTHO05D009075 4.2e-40 168.7 133 63.2
CANSAT01G1666 Cannabis sativa HOM05D007341 ORTHO05D009075 9.4e-40 167.5 104 73.1
FAN09G2851 Fragaria x ananassa HOM05D007341 ORTHO05D009075 1.2e-39 167.2 133 62.4
Lsat_1_v5_gn_9_114620 Lactuca sativa HOM05D007341 ORTHO05D009075 3.6e-39 165.6 131 65.6
LjContig00482g0010930 Lotus japonicus HOM05D007341 ORTHO05D009075 7.9e-39 164.5 131 66.4
PGR102G3137 Punica granatum HOM05D007341 ORTHO05D009075 3.0e-38 162.5 138 64.5
CARHR072660 Cardamine hirsuta HOM05D007341 ORTHO05D009075 3.9e-38 162.2 138 65.2
unitig_748.g7237 Utricularia gibba HOM05D007341 ORTHO05D009075 3.9e-38 162.2 143 62.2
A07p27380 Brassica napus HOM05D007341 ORTHO05D009075 1.1e-37 160.6 138 65.2
BraA07t30379Z Brassica rapa HOM05D007341 ORTHO05D009075 1.1e-37 160.6 138 65.2
Migut.K00075 Erythranthe guttata HOM05D007341 ORTHO05D009075 1.1e-37 160.6 163 57.1
AT1G78995 Arabidopsis thaliana HOM05D007341 ORTHO05D009075 1.5e-37 160.2 170 54.7
Carub.0002s2586 Capsella rubella HOM05D007341 ORTHO05D009075 2.0e-37 159.8 136 65.4
DCAR_027600 Daucus carota HOM05D007341 ORTHO05D009075 2.6e-37 159.5 134 63.4
ECA240G2002 Erigeron canadensis HOM05D007341 ORTHO05D009075 3.3e-37 159.1 133 64.7
Thhalv10019269m.g Eutrema salsugineum HOM05D007341 ORTHO05D009075 3.3e-37 159.1 136 65.4
Lalb_Chr24g0392671 Lupinus albus HOM05D007341 ORTHO05D009075 4.4e-37 158.7 131 64.9
BcaB02g07190 Brassica carinata HOM05D007341 ORTHO05D009075 5.7e-37 158.3 138 64.5
AL2G39450 Arabidopsis lyrata HOM05D007341 ORTHO05D009075 7.4e-37 157.9 100 78.0
BcaC08g45393 Brassica carinata HOM05D007341 ORTHO05D009075 9.7e-37 157.5 139 64.7
C06p30240 Brassica napus HOM05D007341 ORTHO05D009075 9.7e-37 157.5 139 64.7
BolC6t38187H Brassica oleracea HOM05D007341 ORTHO05D009075 9.7e-37 157.5 139 64.7
MSTRG.26115 Avicennia marina HOM05D007341 ORTHO05D009075 1.3e-36 157.1 152 57.9
Glyma.15G000400 Glycine max HOM05D007341 ORTHO05D009075 1.7e-36 156.8 108 71.3
Medtr6g004140 Medicago truncatula HOM05D007341 ORTHO05D009075 2.2e-36 156.4 126 63.5
Sp5g34040 Schrenkiella parvula HOM05D007341 ORTHO05D009075 2.2e-36 156.4 130 67.7
Actinidia38822 Actinidia chinensis HOM05D007341 ORTHO05D009075 3.1e-35 152.5 132 64.4
Aqoxy7G02561 Aquilegia oxysepala HOM05D007341 ORTHO05D009075 9.1e-35 151.0 144 58.3
Phvul.005G082000 Phaseolus vulgaris HOM05D007341 ORTHO05D009075 1.2e-34 150.6 129 62.0
CDE05G1356 Ceratophyllum demersum HOM05D007341 ORTHO05D009075 1.5e-34 150.2 122 65.6
HPP92_026441 Vanilla planifolia HOM05D007341 ORTHO05D009075 1.5e-34 150.2 152 55.9
Pp3c15_22740 Physcomitrium patens HOM05D007341 ORTHO05D009075 4.5e-34 148.7 103 69.9
Mapoly0061s0126 Marchantia polymorpha HOM05D007341 ORTHO05D009075 5.9e-34 148.3 98 72.4
AUR62001305 Chenopodium quinoa HOM05D007341 ORTHO05D009075 1.0e-33 147.5 98 70.4
AUR62025687 Chenopodium quinoa HOM05D007341 ORTHO05D009075 1.3e-33 147.1 98 69.4
EL10Ac7g18105 Beta vulgaris HOM05D007341 ORTHO05D009075 5.5e-32 141.7 97 67.0
SGA_v2.0_scaffold94G28462 Striga asiatica HOM05D007341 ORTHO05D009075 1.6e-31 140.2 132 62.1
Zm00001eb227230 Zea mays HOM05D007341 ORTHO05D009075 1.6e-31 140.2 120 63.3
DCAR_011722 Daucus carota HOM05D007341 ORTHO05D009075 2.7e-31 139.4 136 55.9
ATR0626G096 Amborella trichopoda HOM05D007341 ORTHO05D009075 6.1e-31 138.3 125 60.8
Nitab4.5_0001911g0010 Nicotiana tabacum HOM05D007341 ORTHO05D009075 6.1e-31 138.3 144 58.3
PSO170G4447 Papaver somniferum HOM05D007341 ORTHO05D009075 3.9e-30 135.6 127 59.1
ClCG05G010440 Citrullus lanatus HOM05D007341 ORTHO05D009075 6.7e-30 134.8 84 77.4
Hund18551 Selenicereus undatus HOM05D007341 ORTHO05D009075 6.7e-30 134.8 152 53.9
PSO063G2737 Papaver somniferum HOM05D007341 ORTHO05D009075 2.6e-29 132.9 126 55.6
Cpa.g.sc4293.1 Carica papaya HOM05D007341 ORTHO05D009075 3.7e-28 129.0 118 59.3
Sc16g0003760 Simmondsia chinensis HOM05D007341 ORTHO05D009075 6.3e-28 128.3 91 74.7
SMO232G0085 Selaginella moellendorffii HOM05D007341 ORTHO05D009075 1.1e-27 127.5 124 54.8
Nn8g41280 Nelumbo nucifera HOM05D007341 ORTHO05D009075 1.8e-27 126.7 112 63.4
FAN14G2925 Fragaria x ananassa HOM05D007341 ORTHO05D009075 1.6e-26 123.6 133 51.9
FAN14G4935 Fragaria x ananassa HOM05D007341 ORTHO05D009075 1.6e-26 123.6 133 51.9
VMungo1080G1509 Vigna mungo HOM05D007341 ORTHO05D009075 1.6e-26 123.6 115 60.9
Os06g0704200 Oryza sativa ssp. japonica HOM05D007341 ORTHO05D009075 5.0e-25 118.6 118 56.8
Sabra14G0002900 Salix brachista HOM05D007341 ORTHO05D009075 1.5e-24 117.1 90 64.4
C02p36120 Brassica napus HOM05D007341 ORTHO05D009075 4.0e-22 109.0 66 77.3
Manes.06G177800 Manihot esculenta HOM05D007341 ORTHO05D009075 2.8e-20 102.8 131 51.9
Rhsim08G0252300 Rhododendron simsii HOM05D000912 ORTHO05D009075 1.1e-19 100.9 101 59.4
SalBow1G8719 Salvia bowleyana HOM05D007341 ORTHO05D009075 1.4e-19 100.5 116 55.2
Peaxi162Scf00330g00029 Petunia axillaris HOM05D007341 ORTHO05D009075 3.1e-19 99.4 172 43.6
vmacro18722 Vaccinium macrocarpon HOM05D007341 ORTHO05D009075 4.1e-19 99.0 125 49.6
Oeu004021.1 Olea europaea HOM05D007341 ORTHO05D009075 5.3e-19 98.6 97 59.8
SalBow1G7986 Salvia bowleyana HOM05D007341 ORTHO05D009075 1.2e-18 97.4 93 62.4
Lj9A544T49 Lonicera japonica HOM05D007341 ORTHO05D009075 2.0e-18 96.7 73 68.5
Aa31LG4G1990 Aethionema arabicum HOM05D007341 ORTHO05D009075 1.3e-17 94.0 108 55.6
Cre01.g000800 Chlamydomonas reinhardtii HOM05D007341 ORTHO05D009075 1.7e-17 93.6 125 44.0
Os02g0138100 Oryza sativa ssp. japonica HOM05D007341 ORTHO05D009075 1.9e-16 90.1 80 58.8
MCO04G269 Micromonas commoda HOM05D007341 ORTHO05D009075 4.7e-15 85.5 142 37.3
Psat6g000680 Pisum sativum HOM05D007341 ORTHO05D009075 8.0e-15 84.7 92 55.4
MBI13_g34919_MAGBIO Magnolia biondii HOM05D007341 ORTHO05D009075 1.5e-13 80.5 78 64.1
AagrBONN_evm.TU.Sc2ySwM_368.1307 Anthoceros agrestis HOM05D007341 ORTHO05D009075 1.1e-11 74.3 108 46.3
Ah.08g218010 Amaranthus hybridus HOM05D007341 ORTHO05D009075 1.6e-10 70.5 101 44.6
PRCOL_00000561 Prasinoderma coloniale HOM05D007341 ORTHO05D009075 3.5e-10 69.3 134 35.1
Zm00001eb231900 Zea mays HOM05D007341 ORTHO05D009075 8.6e-09 64.7 118 38.1


User provided reference genes

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