Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g16310 Coffea canephora HOM05D006205 ORTHO05D007703 1.5e-214 749.2 361 100.0
Dinv24098 Davidia involucrata HOM05D006205 ORTHO05D007703 2.8e-189 665.2 359 86.4
Actinidia17259 Actinidia chinensis HOM05D006205 ORTHO05D007703 2.4e-188 662.1 359 85.5
CSS0013544 Camellia sinensis var. sinensis HOM05D006205 ORTHO05D007703 6.9e-188 660.6 357 86.0
Gorai.002G228500 Gossypium raimondii HOM05D006205 ORTHO05D007703 1.5e-187 659.4 357 85.7
MSTRG.26097 Avicennia marina HOM05D006205 ORTHO05D007703 2.0e-187 659.1 359 85.8
Duzib106G0917 Durio zibethinus HOM05D006205 ORTHO05D007703 4.5e-187 657.9 357 85.4
Gohir.A01G194800 Gossypium hirsutum HOM05D006205 ORTHO05D007703 1.3e-186 656.4 357 85.2
Nitab4.5_0006846g0010 Nicotiana tabacum HOM05D006205 ORTHO05D007703 2.9e-186 655.2 359 84.1
Thecc.05G167100 Theobroma cacao HOM05D006205 ORTHO05D007703 3.8e-186 654.8 357 84.9
Hma1.2p1_1575F.1_g291620 Hydrangea macrophylla HOM05D006205 ORTHO05D007703 4.9e-186 654.4 359 85.0
Manes.09G031300 Manihot esculenta HOM05D006205 ORTHO05D007703 6.4e-186 654.1 359 84.1
CiPaw.09G032800 Carya illinoinensis HOM05D006205 ORTHO05D007703 8.4e-186 653.7 361 84.5
Duzib093G1988 Durio zibethinus HOM05D006205 ORTHO05D007703 8.4e-186 653.7 357 84.9
Haze_19942 Corylus avellana HOM05D006205 ORTHO05D007703 1.1e-185 653.3 361 84.8
Gohir.D01G185000 Gossypium hirsutum HOM05D006205 ORTHO05D007703 4.2e-185 651.4 357 84.9
SGA_v2.0_scaffold94G28443 Striga asiatica HOM05D006205 ORTHO05D007703 5.4e-185 651.0 360 84.7
Eucgr.K01821 Eucalyptus grandis HOM05D006205 ORTHO05D007703 1.2e-184 649.8 359 83.8
Ca_08497_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 2.1e-184 649.0 359 83.6
Ca_29722_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 2.1e-184 649.0 359 83.6
TAR623G1003 Trochodendron aralioides HOM05D006205 ORTHO05D007703 3.5e-184 648.3 359 83.6
Hund19180 Selenicereus undatus HOM05D006205 ORTHO05D007703 6.0e-184 647.5 359 84.7
PGR142G1368 Punica granatum HOM05D006205 ORTHO05D007703 1.3e-183 646.4 359 82.5
Lju124A32T75 Lonicera japonica HOM05D006205 ORTHO05D007703 2.3e-183 645.6 359 82.7
Prupe.7G072500 Prunus persica HOM05D006205 ORTHO05D007703 3.9e-183 644.8 359 83.8
CAN.G85.9 Capsicum annuum HOM05D006205 ORTHO05D007703 8.7e-183 643.7 359 83.3
Ciclev10031918m.g Citrus clementina HOM05D006205 ORTHO05D007703 1.5e-182 642.9 361 82.5
Sc25g0005160 Simmondsia chinensis HOM05D006205 ORTHO05D007703 1.9e-182 642.5 359 83.6
arahy.Tifrunner.gnm1.ann1.ARGW3J Arachis hypogaea HOM05D006205 ORTHO05D007703 5.6e-182 641.0 356 83.4
Cpa.g.sc85.111 Carica papaya HOM05D006205 ORTHO05D007703 5.6e-182 641.0 359 83.8
Lsat_1_v5_gn_8_79241 Lactuca sativa HOM05D006205 ORTHO05D007703 7.4e-182 640.6 359 81.9
arahy.Tifrunner.gnm1.ann1.68EW5P Arachis hypogaea HOM05D006205 ORTHO05D007703 1.3e-181 639.8 356 83.1
Potri.016G049700 Populus trichocarpa HOM05D006205 ORTHO05D007703 1.3e-181 639.8 359 81.3
PGSC0003DMG400012937 Solanum tuberosum HOM05D006205 ORTHO05D007703 2.8e-181 638.6 359 82.5
TPR.G4691 Trifolium pratense HOM05D006205 ORTHO05D007703 4.8e-181 637.9 359 81.9
VMungo1383G0076 Vigna mungo HOM05D006205 ORTHO05D007703 1.1e-180 636.7 357 81.5
Migut.K00057 Erythranthe guttata HOM05D006205 ORTHO05D007703 1.4e-180 636.3 357 82.9
Glyma.19G144900 Glycine max HOM05D006205 ORTHO05D007703 1.8e-180 636.0 357 82.6
Psat3g069960 Pisum sativum HOM05D006205 ORTHO05D007703 1.8e-180 636.0 359 82.2
QL07p022686 Quercus lobata HOM05D006205 ORTHO05D007703 1.8e-180 636.0 360 82.8
Sabra16G0053600 Salix brachista HOM05D006205 ORTHO05D007703 4.0e-180 634.8 359 80.2
Potri.006G058400 Populus trichocarpa HOM05D006205 ORTHO05D007703 5.3e-180 634.4 359 81.1
Phvul.001G139800 Phaseolus vulgaris HOM05D006205 ORTHO05D007703 6.9e-180 634.0 357 81.8
THA.LOC104809921 Tarenaya hassleriana HOM05D006205 ORTHO05D007703 1.2e-179 633.3 357 81.5
DCAR_013564 Daucus carota HOM05D006205 ORTHO05D007703 2.0e-179 632.5 357 82.4
Lalb_Chr18g0047621 Lupinus albus HOM05D006205 ORTHO05D007703 4.5e-179 631.3 359 81.9
EL10Ac3g06974 Beta vulgaris HOM05D006205 ORTHO05D007703 7.6e-179 630.6 359 81.9
Nn2g15532 Nelumbo nucifera HOM05D006205 ORTHO05D007703 1.3e-178 629.8 358 82.4
Sabra06G0041700 Salix brachista HOM05D006205 ORTHO05D007703 1.7e-178 629.4 359 80.5
Sopen03g017680 Solanum pennellii HOM05D006205 ORTHO05D007703 1.7e-178 629.4 359 81.6
CANSAT64G2514 Cannabis sativa HOM05D006205 ORTHO05D007703 2.2e-178 629.0 360 81.1
FvH4_6g22800 Fragaria vesca HOM05D006205 ORTHO05D007703 2.2e-178 629.0 358 82.4
FAN14G5729 Fragaria x ananassa HOM05D006205 ORTHO05D007703 2.2e-178 629.0 358 82.4
vmacro09103 Vaccinium macrocarpon HOM05D006205 ORTHO05D007703 2.9e-178 628.6 367 80.7
FAN02G0014 Fragaria x ananassa HOM05D006205 ORTHO05D007703 3.8e-178 628.2 358 82.1
Solyc03g064030.3 Solanum lycopersicum HOM05D006205 ORTHO05D007703 1.9e-177 625.9 359 80.8
Lj1g0022121 Lotus japonicus HOM05D006205 ORTHO05D007703 2.5e-177 625.5 394 75.6
RcHm_v2.0_Chr3g0480421 Rosa chinensis HOM05D006205 ORTHO05D007703 3.2e-177 625.2 358 81.8
Medtr7g092680 Medicago truncatula HOM05D006205 ORTHO05D007703 4.2e-177 624.8 357 81.8
FAN05G5560 Fragaria x ananassa HOM05D006205 ORTHO05D007703 7.1e-177 624.0 358 82.1
SalBow1G2518 Salvia bowleyana HOM05D006205 ORTHO05D007703 7.9e-176 620.5 403 74.7
HanXRQChr05g0132791 Helianthus annuus HOM05D006205 ORTHO05D007703 1.8e-175 619.4 362 79.3
MELO3C009648.2 Cucumis melo HOM05D006205 ORTHO05D007703 2.3e-175 619.0 385 76.1
Sed0025317 Sechium edule HOM05D006205 ORTHO05D007703 8.7e-175 617.1 357 80.4
AUR62024356 Chenopodium quinoa HOM05D006205 ORTHO05D007703 1.1e-174 616.7 358 80.7
TWI74G1063 Tripterygium wilfordii HOM05D006205 ORTHO05D007703 3.3e-174 615.1 338 84.0
Carub.0003s1152 Capsella rubella HOM05D006205 ORTHO05D007703 4.3e-174 614.8 358 79.6
Sp3g10390 Schrenkiella parvula HOM05D006205 ORTHO05D007703 4.3e-174 614.8 358 79.9
Aqoxy1G00212 Aquilegia oxysepala HOM05D006205 ORTHO05D007703 9.6e-174 613.6 359 78.6
Thhalv10021002m.g Eutrema salsugineum HOM05D006205 ORTHO05D007703 3.7e-173 611.7 359 79.4
PSO384G4504 Papaver somniferum HOM05D006205 ORTHO05D007703 1.8e-172 609.4 357 78.2
QL93p2022_0017 Quercus lobata HOM05D006205 ORTHO05D007703 1.8e-172 609.4 418 71.3
AL3G23830 Arabidopsis lyrata HOM05D006205 ORTHO05D007703 3.1e-172 608.6 358 78.2
Aa31LG3G6360 Aethionema arabicum HOM05D006205 ORTHO05D007703 5.3e-172 607.8 386 74.1
BcaC05g29277 Brassica carinata HOM05D006205 ORTHO05D007703 6.9e-172 607.4 358 78.5
AT3G12150 Arabidopsis thaliana HOM05D006205 ORTHO05D007703 3.4e-171 605.1 358 77.7
A05p37150 Brassica napus HOM05D006205 ORTHO05D007703 3.4e-171 605.1 358 78.2
C05p55580 Brassica napus HOM05D006205 ORTHO05D007703 3.4e-171 605.1 358 78.2
BolC5t34227H Brassica oleracea HOM05D006205 ORTHO05D007703 3.4e-171 605.1 358 78.2
ClCG10G017350 Citrullus lanatus HOM05D006205 ORTHO05D007703 1.7e-170 602.8 424 69.6
BraA05t22513Z Brassica rapa HOM05D006205 ORTHO05D007703 2.9e-170 602.1 358 77.7
PSO339G0108 Papaver somniferum HOM05D006205 ORTHO05D007703 5.0e-170 601.3 357 77.3
ATR0605G163 Amborella trichopoda HOM05D006205 ORTHO05D007703 1.1e-169 600.1 357 77.6
unitig_899.g15081 Utricularia gibba HOM05D006205 ORTHO05D007703 9.3e-169 597.0 357 79.0
AUR62025960 Chenopodium quinoa HOM05D006205 ORTHO05D007703 1.2e-168 596.7 358 79.1
CDE10G0043 Ceratophyllum demersum HOM05D006205 ORTHO05D007703 7.9e-168 594.0 357 77.9
BraA03t12906Z Brassica rapa HOM05D006205 ORTHO05D007703 1.0e-167 593.6 358 77.1
A03p37470 Brassica napus HOM05D006205 ORTHO05D007703 3.9e-167 591.7 358 76.8
BcaC01g04062 Brassica carinata HOM05D006205 ORTHO05D007703 3.3e-166 588.6 358 76.3
C03p45470 Brassica napus HOM05D006205 ORTHO05D007703 1.6e-165 586.3 358 76.0
BolC3t16816H Brassica oleracea HOM05D006205 ORTHO05D007703 4.8e-165 584.7 358 75.7
Zm00001eb236370 Zea mays HOM05D006205 ORTHO05D007703 8.2e-165 583.9 366 73.5
Os02g0195000 Oryza sativa ssp. japonica HOM05D006205 ORTHO05D007703 1.5e-163 579.7 366 72.1
GSVIVG01033369001 Vitis vinifera HOM05D006205 ORTHO05D007703 8.5e-162 573.9 316 85.4
SEGI_33856 Sequoiadendron giganteum HOM05D006205 ORTHO05D007703 4.3e-158 561.6 357 73.1
Nitab4.5_0000016g0140 Nicotiana tabacum HOM05D006205 ORTHO05D007703 9.7e-158 560.5 359 74.7
Cfa016888 Carpinus fangiana HOM05D006205 ORTHO05D007703 1.4e-153 546.6 302 85.8
BcaB04g18694 Brassica carinata HOM05D006205 ORTHO05D007703 7.9e-152 540.8 335 74.9
ECA236G0538 Erigeron canadensis HOM05D006205 ORTHO05D007703 8.8e-151 537.3 316 80.7
MD12G1062300 Malus domestica HOM05D006205 ORTHO05D007703 3.1e-148 528.9 306 81.7
SMO334G0020 Selaginella moellendorffii HOM05D006205 ORTHO05D007703 3.0e-143 512.3 357 68.1
Rhsim04G0098500 Rhododendron simsii HOM05D006205 ORTHO05D007703 1.7e-141 506.5 403 62.5
Mapoly0096s0035 Marchantia polymorpha HOM05D006205 ORTHO05D007703 2.8e-141 505.8 360 67.2
Ah.13g076130 Amaranthus hybridus HOM05D006205 ORTHO05D007703 7.0e-140 501.1 360 69.7
Pp3c3_27370 Physcomitrium patens HOM05D006205 ORTHO05D007703 5.9e-139 498.0 358 65.9
AagrBONN_evm.TU.Sc2ySwM_228.3151 Anthoceros agrestis HOM05D006205 ORTHO05D007703 2.5e-137 492.7 358 65.9
Peaxi162Scf00285g00443 Petunia axillaris HOM05D006205 ORTHO05D007703 1.1e-129 467.2 359 66.6
SalBow1G2557 Salvia bowleyana HOM05D006205 ORTHO05D007703 1.5e-126 456.8 367 63.8
CsaV3_3G039050 Cucumis sativus L. HOM05D006205 ORTHO05D007703 2.0e-126 456.4 250 86.0
COL.COLO4_36119 Corchorus olitorius HOM05D006205 ORTHO05D007703 9.8e-126 454.1 244 88.9
CBR_g25855 Chara braunii HOM05D006205 ORTHO05D007703 2.3e-122 443.0 368 60.1
HPP92_023778 Vanilla planifolia HOM05D006205 ORTHO05D007703 8.6e-114 414.5 239 83.3
Dinv18116 Davidia involucrata HOM05D006205 ORTHO05D007703 3.0e-106 389.4 211 84.4
CARHR086730 Cardamine hirsuta HOM05D006205 ORTHO05D007703 3.5e-99 365.9 204 83.3
Glyma.02G176500 Glycine max HOM05D006205 ORTHO05D007703 8.7e-74 281.6 180 76.1
MBI04_g47239_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 5.3e-63 245.7 152 69.1
MBI04_g14269_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 3.9e-58 229.6 154 66.9
MD14G1062900 Malus domestica HOM05D006205 ORTHO05D007703 2.5e-52 210.3 126 76.2
Actinidia33641 Actinidia chinensis HOM05D006205 ORTHO05D007703 3.2e-52 209.9 119 74.8
Cre02.g076150 Chlamydomonas reinhardtii HOM05D006205 ORTHO05D007703 2.6e-46 190.3 319 37.3
MD14G1062700 Malus domestica HOM05D006205 ORTHO05D007703 1.4e-44 184.5 205 49.8
VMungo1080G0431 Vigna mungo HOM05D006205 ORTHO05D007703 1.3e-37 161.4 98 79.6
arahy.Tifrunner.gnm1.ann1.EV0IJD Arachis hypogaea HOM05D006205 ORTHO05D007703 1.5e-33 147.9 86 83.7
MD12G1062200 Malus domestica HOM05D006205 ORTHO05D007703 6.3e-24 115.9 57 87.7
VMungo0331G0486 Vigna mungo HOM05D006205 ORTHO05D007703 1.1e-20 105.1 107 51.4
Medtr0001s0010 Medicago truncatula HOM05D006205 ORTHO05D007703 1.2e-19 101.7 79 67.1
Glyma.02G176400 Glycine max HOM05D006205 ORTHO05D007703 2.4e-15 87.4 51 70.6
Rhsim04G0098400 Rhododendron simsii HOM05D000259 ORTHO05D000155 3.8e-13 80.1 36 94.4
BcaC01g04094 Brassica carinata HOM05D001227 ORTHO05D001082 4.2e-12 76.6 162 34.0
MCO07G325 Micromonas commoda HOM05D006205 ORTHO05D007703 3.0e-10 70.5 293 26.3


User provided reference genes

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