Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g15970 Coffea canephora HOM05D003436 ORTHO05D003674 1.2e-74 283.1 149 100.0
Oeu034263.1 Olea europaea HOM05D008970 ORTHO05D003674 1.1e-17 94.0 141 50.4
Aa31sc24G30 Aethionema arabicum HOM05D003436 ORTHO05D003674 1.0e-12 77.4 159 42.1
Rhsim03G0006400 Rhododendron simsii HOM05D003436 ORTHO05D003674 1.0e-12 77.4 150 44.7
Dinv14293 Davidia involucrata HOM05D003436 ORTHO05D003674 2.3e-12 76.3 150 43.3
THA.LOC104826769 Tarenaya hassleriana HOM05D003436 ORTHO05D003674 1.1e-11 73.9 153 43.8
AT5G06760 Arabidopsis thaliana HOM05D003436 ORTHO05D003674 1.9e-11 73.2 163 40.5
Migut.J01829 Erythranthe guttata HOM05D003436 ORTHO05D003674 1.9e-11 73.2 176 38.1
Nitab4.5_0002343g0050 Nicotiana tabacum HOM05D003436 ORTHO05D003674 1.9e-11 73.2 132 44.7
Peaxi162Scf00003g04337 Petunia axillaris HOM05D003436 ORTHO05D003674 4.3e-11 72.0 125 46.4
Ciclev10012978m.g Citrus clementina HOM05D003436 ORTHO05D003674 5.6e-11 71.6 171 39.8
PSO339G4457 Papaver somniferum HOM05D003436 ORTHO05D003674 5.6e-11 71.6 135 44.4
Glyma.03G144400 Glycine max HOM05D003436 ORTHO05D003674 7.4e-11 71.2 158 41.1
Nitab4.5_0000324g0100 Nicotiana tabacum HOM05D003436 ORTHO05D003674 9.6e-11 70.9 163 39.9
GSVIVG01033505001 Vitis vinifera HOM05D003436 ORTHO05D003674 1.6e-10 70.1 156 42.9
Sp6g36090 Schrenkiella parvula HOM05D003436 ORTHO05D003674 2.8e-10 69.3 64 65.6
Potri.016G046350 Populus trichocarpa HOM05D003436 ORTHO05D003674 3.7e-10 68.9 115 43.5
BcaC06g32544 Brassica carinata HOM05D003436 ORTHO05D003674 4.8e-10 68.6 64 64.1
C09p69990 Brassica napus HOM05D003436 ORTHO05D003674 6.2e-10 68.2 161 41.6
BolC9t59741H Brassica oleracea HOM05D003436 ORTHO05D003674 6.2e-10 68.2 161 41.6
Nitab4.5_0000105g0110 Nicotiana tabacum HOM05D003436 ORTHO05D003674 6.2e-10 68.2 140 41.4
ClCG04G002110 Citrullus lanatus HOM05D003436 ORTHO05D003674 1.1e-09 67.4 173 39.9
Manes.08G044900 Manihot esculenta HOM05D003436 ORTHO05D003674 1.1e-09 67.4 125 44.8
Peaxi162Scf00258g00520 Petunia axillaris HOM05D003436 ORTHO05D003674 1.1e-09 67.4 162 38.9
MD12G1057800 Malus domestica HOM05D003436 ORTHO05D003674 1.4e-09 67.0 172 42.4
Medtr7g093140 Medicago truncatula HOM05D003436 ORTHO05D003674 1.4e-09 67.0 106 48.1
BcaC06g32392 Brassica carinata HOM05D003436 ORTHO05D003674 1.8e-09 66.6 161 41.0
Cpa.g.sc85.72 Carica papaya HOM05D003436 ORTHO05D003674 1.8e-09 66.6 177 38.4
BcaB01g06002 Brassica carinata HOM05D003436 ORTHO05D003674 2.4e-09 66.2 168 39.9
A10p29610 Brassica napus HOM05D003436 ORTHO05D003674 2.4e-09 66.2 166 40.4
BraA10t45003Z Brassica rapa HOM05D003436 ORTHO05D003674 2.4e-09 66.2 166 40.4
CANSAT64G0020 Cannabis sativa HOM05D003436 ORTHO05D003674 2.4e-09 66.2 147 37.4
Glyma.19G147200 Glycine max HOM05D003436 ORTHO05D003674 2.4e-09 66.2 167 38.3
Nitab4.5_0008334g0040 Nicotiana tabacum HOM05D003436 ORTHO05D003674 2.4e-09 66.2 121 47.1
AL6G16870 Arabidopsis lyrata HOM05D003436 ORTHO05D003674 4.0e-09 65.5 64 62.5
Phvul.001G143100 Phaseolus vulgaris HOM05D003436 ORTHO05D003674 4.0e-09 65.5 171 36.3
MSTRG.19903 Avicennia marina HOM05D003436 ORTHO05D003674 5.3e-09 65.1 92 51.1
CAN.G1161.31 Capsicum annuum HOM05D003436 ORTHO05D003674 5.3e-09 65.1 83 51.8
CsaV3_4G030630 Cucumis sativus L. HOM05D003436 ORTHO05D003674 5.3e-09 65.1 175 39.4
FAN02G3232 Fragaria x ananassa HOM05D003436 ORTHO05D003674 5.3e-09 65.1 170 37.6
Medtr7g093160 Medicago truncatula HOM05D003436 ORTHO05D003674 5.3e-09 65.1 78 55.1
Actinidia22034 Actinidia chinensis HOM05D003436 ORTHO05D003674 6.9e-09 64.7 109 44.0
C03p03280 Brassica napus HOM05D003436 ORTHO05D003674 6.9e-09 64.7 165 40.0
MELO3C008930.2 Cucumis melo HOM05D003436 ORTHO05D003674 6.9e-09 64.7 178 38.8
Medtr7g093170 Medicago truncatula HOM05D003436 ORTHO05D003674 6.9e-09 64.7 93 51.6
Lalb_Chr15g0078981 Lupinus albus HOM05D003436 ORTHO05D003674 9.0e-09 64.3 145 40.0
Medtr1g053970 Medicago truncatula HOM05D003436 ORTHO05D003674 9.0e-09 64.3 82 48.8
GSVIVG01033503001 Vitis vinifera HOM05D003436 ORTHO05D003674 9.0e-09 64.3 90 51.1
Thhalv10014897m.g Eutrema salsugineum HOM05D003436 ORTHO05D003674 1.2e-08 63.9 168 38.1
HanXRQChr05g0132881 Helianthus annuus HOM05D003436 ORTHO05D003674 1.2e-08 63.9 166 41.0
SalBow1G8531 Salvia bowleyana HOM05D003436 ORTHO05D003674 1.2e-08 63.9 78 61.5
unitig_899.g15079 Utricularia gibba HOM05D003436 ORTHO05D003674 1.2e-08 63.9 84 53.6
Dinv14294 Davidia involucrata HOM05D003436 ORTHO05D003674 1.5e-08 63.5 73 56.2
Nitab4.5_0008334g0020 Nicotiana tabacum HOM05D003436 ORTHO05D003674 1.5e-08 63.5 166 35.5
Sed0015125 Sechium edule HOM05D003436 ORTHO05D003674 1.5e-08 63.5 82 53.7
Sopen10g029400 Solanum pennellii HOM05D003436 ORTHO05D003674 2.0e-08 63.2 100 47.0
Ca_08518_v3 Cicer arietinum L. HOM05D003436 ORTHO05D003674 2.6e-08 62.8 157 39.5
COL.COLO4_33990 Corchorus olitorius HOM05D011887 ORTHO05D003674 2.6e-08 62.8 161 38.5
MBI04_g39831_MAGBIO Magnolia biondii HOM05D003436 ORTHO05D003674 2.6e-08 62.8 150 38.7
Psat0s797g0160 Pisum sativum HOM05D003436 ORTHO05D003674 2.6e-08 62.8 107 45.8
TPR.G27745 Trifolium pratense HOM05D003436 ORTHO05D003674 2.6e-08 62.8 64 57.8
arahy.Tifrunner.gnm1.ann1.00VVAL Arachis hypogaea HOM05D003436 ORTHO05D003674 3.4e-08 62.4 116 43.1
Lalb_Chr04g0261031 Lupinus albus HOM05D003436 ORTHO05D003674 3.4e-08 62.4 114 40.4
Oeu033740.1 Olea europaea HOM05D003436 ORTHO05D003674 3.4e-08 62.4 157 39.5
QL07p023622 Quercus lobata HOM05D003436 ORTHO05D003674 3.4e-08 62.4 60 63.3
SalBow4G2804 Salvia bowleyana HOM05D003436 ORTHO05D003674 3.4e-08 62.4 100 47.0
SGA_v2.0_scaffold105G30485 Striga asiatica HOM05D003436 ORTHO05D003674 3.4e-08 62.4 144 39.6
ATR0605G384 Amborella trichopoda HOM05D003436 ORTHO05D003674 4.5e-08 62.0 146 37.0
Aqoxy7G03903 Aquilegia oxysepala HOM05D003436 ORTHO05D003674 4.5e-08 62.0 124 42.7
Sabra16G0050300 Salix brachista HOM05D003436 ORTHO05D003674 4.5e-08 62.0 122 41.0
arahy.Tifrunner.gnm1.ann1.95S5ZX Arachis hypogaea HOM05D003436 ORTHO05D003674 5.8e-08 61.6 116 42.2
Prupe.7G076400 Prunus persica HOM05D003436 ORTHO05D003674 5.8e-08 61.6 157 37.6
Psat0s797g0240 Pisum sativum HOM05D003436 ORTHO05D003674 7.6e-08 61.2 82 52.4
Solyc10g078780.2 Solanum lycopersicum HOM05D003436 ORTHO05D003674 7.6e-08 61.2 83 50.6
TWI53G0478 Tripterygium wilfordii HOM05D003436 ORTHO05D003674 7.6e-08 61.2 77 53.2
Carub.0006s0565 Capsella rubella HOM05D003436 ORTHO05D003674 9.9e-08 60.8 102 48.0
Nitab4.5_0000105g0070 Nicotiana tabacum HOM05D003436 ORTHO05D003674 9.9e-08 60.8 164 37.2
BcaB01g06022 Brassica carinata HOM05D003436 ORTHO05D003674 1.3e-07 60.5 63 58.7
CARHR206420 Cardamine hirsuta HOM05D003436 ORTHO05D003674 1.3e-07 60.5 163 39.9
PSO017G1578 Papaver somniferum HOM05D003436 ORTHO05D003674 1.3e-07 60.5 53 67.9
TWI74G0976 Tripterygium wilfordii HOM05D003436 ORTHO05D003674 1.3e-07 60.5 104 44.2
unitig_736.g22300 Utricularia gibba HOM05D000267 ORTHO05D000298 1.3e-07 60.5 106 46.2
Actinidia32389 Actinidia chinensis HOM05D003436 ORTHO05D003674 1.7e-07 60.1 112 43.8
C03p03320 Brassica napus HOM05D003436 ORTHO05D003674 1.7e-07 60.1 64 57.8
BolC3t12875H Brassica oleracea HOM05D003436 ORTHO05D003674 1.7e-07 60.1 64 57.8
Nitab4.5_0001538g0030 Nicotiana tabacum HOM05D003436 ORTHO05D003674 1.7e-07 60.1 164 36.6
MBI04_g14513_MAGBIO Magnolia biondii HOM05D003436 ORTHO05D003674 2.2e-07 59.7 101 45.5
Nitab4.5_0001538g0010 Nicotiana tabacum HOM05D003436 ORTHO05D003674 2.2e-07 59.7 80 56.2
PGSC0003DMG400011439 Solanum tuberosum HOM05D003436 ORTHO05D003674 2.2e-07 59.7 92 47.8
Ca_25707_v3 Cicer arietinum L. HOM05D003436 ORTHO05D003674 2.9e-07 59.3 106 44.3
Thecc.05G170800 Theobroma cacao HOM05D003436 ORTHO05D003674 2.9e-07 59.3 169 34.9
CDE06G2670 Ceratophyllum demersum HOM05D003436 ORTHO05D003674 3.8e-07 58.9 103 40.8
PGSC0003DMG400011437 Solanum tuberosum HOM05D003436 ORTHO05D003674 3.8e-07 58.9 60 60.0
TWI77G0090 Tripterygium wilfordii HOM05D003436 ORTHO05D003674 3.8e-07 58.9 84 50.0
CAN.G1161.29 Capsicum annuum HOM05D003436 ORTHO05D003674 4.9e-07 58.5 93 45.2
Lj1g0001300 Lotus japonicus HOM05D003436 ORTHO05D003674 4.9e-07 58.5 145 37.2
Nn7g36015 Nelumbo nucifera HOM05D003436 ORTHO05D003674 4.9e-07 58.5 107 41.1
Psat3g068920 Pisum sativum HOM05D003436 ORTHO05D003674 4.9e-07 58.5 92 47.8
Sed0019071 Sechium edule HOM05D003436 ORTHO05D003674 4.9e-07 58.5 124 39.5
VMungo1383G0066 Vigna mungo HOM05D003436 ORTHO05D003674 4.9e-07 58.5 63 55.6
Aqoxy2G03681 Aquilegia oxysepala HOM05D003436 ORTHO05D003674 6.4e-07 58.2 60 60.0
Aqoxy7G02037 Aquilegia oxysepala HOM05D003436 ORTHO05D003674 6.4e-07 58.2 60 60.0
Peaxi162Scf00003g04347 Petunia axillaris HOM05D003436 ORTHO05D003674 6.4e-07 58.2 163 36.2
BcaB01g06026 Brassica carinata HOM05D003436 ORTHO05D003674 8.4e-07 57.8 63 57.1
Glyma.09G112100 Glycine max HOM05D003436 ORTHO05D003674 8.4e-07 57.8 96 46.9
Nitab4.5_0000105g0080 Nicotiana tabacum HOM05D003436 ORTHO05D003674 8.4e-07 57.8 75 54.7
VMungo1383G0252 Vigna mungo HOM05D003436 ORTHO05D003674 1.1e-06 57.4 154 36.4
ECA236G0475 Erigeron canadensis HOM05D000402 ORTHO05D000263 1.4e-06 57.0 127 40.9
arahy.Tifrunner.gnm1.ann1.BAUA8N Arachis hypogaea HOM05D003436 ORTHO05D003674 1.9e-06 56.6 160 36.9
A03p02880 Brassica napus HOM05D003436 ORTHO05D003674 1.9e-06 56.6 161 36.0
BraA03t09652Z Brassica rapa HOM05D003436 ORTHO05D003674 1.9e-06 56.6 161 36.0
Lsat_1_v5_gn_8_75321 Lactuca sativa HOM05D003436 ORTHO05D003674 1.9e-06 56.6 115 39.1
Nitab4.5_0000105g0100 Nicotiana tabacum HOM05D003436 ORTHO05D003674 1.9e-06 56.6 75 53.3
PSO170G2585 Papaver somniferum HOM05D003436 ORTHO05D003674 2.4e-06 56.2 48 68.8
Psat6g120960 Pisum sativum HOM05D003436 ORTHO05D003674 3.2e-06 55.8 64 53.1
VMungo0720G0768 Vigna mungo HOM05D003436 ORTHO05D003674 3.2e-06 55.8 64 54.7
ClCG10G017480 Citrullus lanatus HOM05D003436 ORTHO05D003674 4.2e-06 55.5 62 53.2
ECA236G0537 Erigeron canadensis HOM05D003436 ORTHO05D003674 4.2e-06 55.5 60 58.3
RcHm_v2.0_Chr3g0479771 Rosa chinensis HOM05D003436 ORTHO05D003674 4.2e-06 55.5 170 37.1
Eucgr.K01836 Eucalyptus grandis HOM05D003436 ORTHO05D003674 5.5e-06 55.1 61 57.4
PGSC0003DMG400011438 Solanum tuberosum HOM05D003436 ORTHO05D003674 5.5e-06 55.1 87 46.0
CAN.G1161.30 Capsicum annuum HOM05D003436 ORTHO05D003674 7.1e-06 54.7 55 58.2
Phvul.001G142000 Phaseolus vulgaris HOM05D003436 ORTHO05D003674 7.1e-06 54.7 114 41.2
Aqoxy3G02738 Aquilegia oxysepala HOM05D003436 ORTHO05D003674 9.3e-06 54.3 52 63.5


User provided reference genes

Program Settings