Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g15700 Coffea canephora HOM05D007056 ORTHO05D008278 3.7e-154 548.1 269 100.0
Lj2A365G87 Lonicera japonica HOM05D007056 ORTHO05D008278 5.4e-105 384.8 201 88.6
Dinv16370 Davidia involucrata HOM05D007056 ORTHO05D008278 2.7e-104 382.5 272 71.3
CSS0008084 Camellia sinensis var. sinensis HOM05D007056 ORTHO05D008278 2.3e-103 379.4 251 74.1
SGA_v2.0_scaffold69G23055 Striga asiatica HOM05D007056 ORTHO05D008278 8.7e-103 377.5 272 69.1
Duzib093G0790 Durio zibethinus HOM05D007056 ORTHO05D008278 1.6e-101 373.2 202 85.6
CiPaw.09G028900 Carya illinoinensis HOM05D007056 ORTHO05D008278 1.1e-100 370.5 202 85.6
Actinidia38590 Actinidia chinensis HOM05D007056 ORTHO05D008278 1.8e-100 369.8 262 71.0
Thecc.05G174400 Theobroma cacao HOM05D007056 ORTHO05D008278 2.4e-100 369.4 202 85.1
Cpa.g.sc85.61 Carica papaya HOM05D007056 ORTHO05D008278 6.9e-100 367.9 210 81.9
Ciclev10012466m.g Citrus clementina HOM05D007056 ORTHO05D008278 1.5e-99 366.7 265 70.6
Glyma.19G149400 Glycine max HOM05D007056 ORTHO05D008278 1.5e-99 366.7 209 81.3
Nn2g15729 Nelumbo nucifera HOM05D007056 ORTHO05D008278 1.5e-99 366.7 268 68.3
EL10Ac3g06891 Beta vulgaris HOM05D007056 ORTHO05D008278 2.0e-99 366.3 244 71.3
Atru.chr8.1149 Acer truncatum HOM05D007056 ORTHO05D008278 2.6e-99 365.9 195 86.2
Ah.04g152820 Amaranthus hybridus HOM05D007056 ORTHO05D008278 3.4e-99 365.5 210 81.4
CAN.G128.50 Capsicum annuum HOM05D007056 ORTHO05D008278 4.5e-99 365.2 260 69.2
Lalb_Chr18g0048001 Lupinus albus HOM05D007056 ORTHO05D008278 7.6e-99 364.4 212 81.1
PGR142G3072 Punica granatum HOM05D007056 ORTHO05D008278 9.9e-99 364.0 269 69.5
arahy.Tifrunner.gnm1.ann1.LTU6F0 Arachis hypogaea HOM05D007056 ORTHO05D008278 1.3e-98 363.6 199 83.9
AUR62011999 Chenopodium quinoa HOM05D007056 ORTHO05D008278 1.3e-98 363.6 239 74.9
Lj1g0028043 Lotus japonicus HOM05D007056 ORTHO05D008278 1.7e-98 363.2 244 73.0
Gorai.012G099400 Gossypium raimondii HOM05D007056 ORTHO05D008278 2.2e-98 362.8 259 69.1
Gohir.D04G089300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 2.9e-98 362.5 259 69.1
RcHm_v2.0_Chr3g0479281 Rosa chinensis HOM05D007056 ORTHO05D008278 2.9e-98 362.5 200 83.5
Solyc10g080560.2 Solanum lycopersicum HOM05D007056 ORTHO05D008278 2.9e-98 362.5 268 69.8
arahy.Tifrunner.gnm1.ann1.DK1M71 Arachis hypogaea HOM05D007056 ORTHO05D008278 3.8e-98 362.1 243 72.8
PGSC0003DMG400023706 Solanum tuberosum HOM05D007056 ORTHO05D008278 3.8e-98 362.1 257 70.0
MBI19_g17420_MAGBIO Magnolia biondii HOM05D007056 ORTHO05D008278 6.4e-98 361.3 211 80.1
Potri.016G060000 Populus trichocarpa HOM05D007056 ORTHO05D008278 6.4e-98 361.3 263 68.4
Cfa020149 Carpinus fangiana HOM05D007056 ORTHO05D008278 8.4e-98 360.9 260 68.5
Prupe.7G080200 Prunus persica HOM05D007056 ORTHO05D008278 1.1e-97 360.5 269 68.0
QL07p024320 Quercus lobata HOM05D007056 ORTHO05D008278 1.4e-97 360.1 280 67.1
QL07p024358 Quercus lobata HOM05D007056 ORTHO05D008278 1.4e-97 360.1 280 67.1
VMungo1383G1827 Vigna mungo HOM05D007056 ORTHO05D008278 2.4e-97 359.4 209 80.4
HanXRQChr01g0010031 Helianthus annuus HOM05D007056 ORTHO05D008278 3.2e-97 359.0 269 68.0
Sopen10g031100 Solanum pennellii HOM05D007056 ORTHO05D008278 3.2e-97 359.0 266 68.4
Sabra16G0062800 Salix brachista HOM05D007056 ORTHO05D008278 4.2e-97 358.6 260 68.8
CANSAT64G0992 Cannabis sativa HOM05D007056 ORTHO05D008278 5.4e-97 358.2 246 72.8
Ca_08534_v3 Cicer arietinum L. HOM05D007056 ORTHO05D008278 7.1e-97 357.8 247 72.5
TWI77G0776 Tripterygium wilfordii HOM05D007056 ORTHO05D008278 1.2e-96 357.1 195 85.1
AUR62015338 Chenopodium quinoa HOM05D007056 ORTHO05D008278 2.7e-96 355.9 248 71.4
Eucgr.K01848 Eucalyptus grandis HOM05D007056 ORTHO05D008278 3.5e-96 355.5 242 71.1
Nitab4.5_0001079g0030 Nicotiana tabacum HOM05D007056 ORTHO05D008278 3.5e-96 355.5 254 69.3
Peaxi162Scf00249g01221 Petunia axillaris HOM05D007056 ORTHO05D008278 4.6e-96 355.1 254 68.1
Phvul.001G143900 Phaseolus vulgaris HOM05D007056 ORTHO05D008278 6.0e-96 354.8 194 85.1
CsaV3_3G038650 Cucumis sativus L. HOM05D007056 ORTHO05D008278 7.9e-96 354.4 254 68.1
Os02g0774500 Oryza sativa ssp. japonica HOM05D007056 ORTHO05D008278 1.8e-95 353.2 196 82.7
Aqoxy2G00097 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 2.3e-95 352.8 245 69.8
FAN09G4108 Fragaria x ananassa HOM05D007056 ORTHO05D008278 2.3e-95 352.8 264 68.2
ATR0598G297 Amborella trichopoda HOM05D007056 ORTHO05D008278 5.1e-95 351.7 205 80.5
TAR369G0080 Trochodendron aralioides HOM05D007056 ORTHO05D008278 5.1e-95 351.7 262 67.2
COL.COLO4_05956 Corchorus olitorius HOM05D007056 ORTHO05D008278 8.7e-95 350.9 210 77.6
Zm00001eb256530 Zea mays HOM05D007056 ORTHO05D008278 1.9e-94 349.7 194 83.0
Rhsim04G0094900 Rhododendron simsii HOM05D007056 ORTHO05D008278 5.6e-94 348.2 193 81.9
Medtr7g093540 Medicago truncatula HOM05D007056 ORTHO05D008278 7.4e-94 347.8 248 70.2
MD14G1054600 Malus domestica HOM05D007056 ORTHO05D008278 1.6e-93 346.7 265 66.0
Lsat_1_v5_gn_5_165300 Lactuca sativa HOM05D007056 ORTHO05D008278 1.1e-92 344.0 272 65.8
Carub.0003s1138 Capsella rubella HOM05D007056 ORTHO05D008278 1.8e-92 343.2 211 74.9
FAN14G2508 Fragaria x ananassa HOM05D007056 ORTHO05D008278 2.4e-92 342.8 264 66.3
CARHR086600 Cardamine hirsuta HOM05D007056 ORTHO05D008278 4.0e-92 342.0 196 79.6
THA.LOC104809936 Tarenaya hassleriana HOM05D007056 ORTHO05D008278 4.0e-92 342.0 194 79.4
Sp3g10270 Schrenkiella parvula HOM05D007056 ORTHO05D008278 5.3e-92 341.7 211 74.4
A05p37300 Brassica napus HOM05D007056 ORTHO05D008278 2.0e-91 339.7 211 74.9
DCAR_019779 Daucus carota HOM05D007056 ORTHO05D008278 2.6e-91 339.3 245 67.8
BraA05t22526Z Brassica rapa HOM05D007056 ORTHO05D008278 3.4e-91 339.0 211 74.4
AT3G12040 Arabidopsis thaliana HOM05D007056 ORTHO05D008278 4.5e-91 338.6 262 64.1
BcaC05g29295 Brassica carinata HOM05D007056 ORTHO05D008278 4.5e-91 338.6 211 74.4
AL3G23650 Arabidopsis lyrata HOM05D007056 ORTHO05D008278 5.8e-91 338.2 204 77.5
BcaB06g25552 Brassica carinata HOM05D007056 ORTHO05D008278 9.9e-91 337.4 196 79.6
HPP92_004381 Vanilla planifolia HOM05D007056 ORTHO05D008278 2.2e-90 336.3 195 82.1
Thhalv10021378m.g Eutrema salsugineum HOM05D007056 ORTHO05D008278 2.9e-90 335.9 209 75.1
C05p55770 Brassica napus HOM05D007056 ORTHO05D008278 1.1e-89 334.0 212 74.1
BolC5t34244H Brassica oleracea HOM05D007056 ORTHO05D008278 1.1e-89 334.0 212 74.1
CDE06G2434 Ceratophyllum demersum HOM05D007056 ORTHO05D008278 3.2e-89 332.4 206 74.8
Hund24814 Selenicereus undatus HOM05D007056 ORTHO05D008278 5.5e-89 331.6 203 78.3
TPR.G35780 Trifolium pratense HOM05D007056 ORTHO05D008278 5.5e-89 331.6 204 77.5
GSVIVG01033475001 Vitis vinifera HOM05D007056 ORTHO05D008278 5.5e-89 331.6 285 62.5
unitig_27.g25110 Utricularia gibba HOM05D007056 ORTHO05D008278 9.3e-89 330.9 216 71.3
SEGI_25756 Sequoiadendron giganteum HOM05D007056 ORTHO05D008278 6.0e-88 328.2 198 76.3
AagrBONN_evm.TU.Sc2ySwM_344.2853 Anthoceros agrestis HOM05D007056 ORTHO05D008278 5.1e-87 325.1 194 76.3
Aa31sc80G100 Aethionema arabicum HOM05D007056 ORTHO05D008278 3.7e-85 318.9 255 62.7
Mapoly0003s0280 Marchantia polymorpha HOM05D007056 ORTHO05D008278 1.5e-83 313.5 258 60.5
SMO146G0068 Selaginella moellendorffii HOM05D007056 ORTHO05D008278 2.9e-82 309.3 193 72.5
Aqoxy3G01855 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 5.5e-81 305.1 242 62.4
ECA248G2501 Erigeron canadensis HOM05D007056 ORTHO05D008278 1.6e-80 303.5 188 76.6
PSO675G9168 Papaver somniferum HOM05D007056 ORTHO05D008278 3.5e-80 302.4 208 71.6
vmacro22110 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 1.3e-79 300.4 328 52.1
PSO541G5037 Papaver somniferum HOM05D007056 ORTHO05D008278 2.5e-78 296.2 262 61.1
Psat3g067120 Pisum sativum HOM05D007056 ORTHO05D008278 9.6e-78 294.3 167 79.0
Oeu024494.3 Olea europaea HOM05D007056 ORTHO05D008278 2.8e-77 292.7 298 56.7
Pp3c1_41490 Physcomitrium patens HOM05D007056 ORTHO05D008278 2.8e-77 292.7 265 56.2
ECA248G2516 Erigeron canadensis HOM05D007056 ORTHO05D008278 4.5e-75 285.4 164 78.0
BcaB06g25551 Brassica carinata HOM05D007056 ORTHO05D008278 1.0e-74 284.3 165 78.8
CBR_g48019 Chara braunii HOM05D000019 ORTHO05D000002 6.5e-74 281.6 185 68.6
FvH4_6g21980 Fragaria vesca HOM05D007056 ORTHO05D008278 2.5e-65 253.1 212 63.2
Sed0027134 Sechium edule HOM05D007056 ORTHO05D008278 5.5e-65 251.9 200 64.5
Gohir.A04G057300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 1.3e-58 230.7 129 83.7
Migut.J01851 Erythranthe guttata HOM05D007056 ORTHO05D008278 2.7e-56 223.0 122 82.0
Psat3g067080 Pisum sativum HOM05D007056 ORTHO05D008278 6.7e-55 218.4 170 65.9
Psat3g067040 Pisum sativum HOM05D007056 ORTHO05D008278 7.4e-54 214.9 229 53.3
ECA248G3402 Erigeron canadensis HOM05D000009 ORTHO05D000008 2.8e-53 213.0 121 78.5
Manes.08G042900 Manihot esculenta HOM05D007056 ORTHO05D008278 6.1e-48 195.3 116 80.2
ClCG10G017660 Citrullus lanatus HOM05D007056 ORTHO05D008278 3.3e-46 189.5 208 52.4
MELO3C009610.2 Cucumis melo HOM05D007056 ORTHO05D008278 3.7e-45 186.0 265 44.9
Sc13g0002370 Simmondsia chinensis HOM05D007056 ORTHO05D008278 8.2e-45 184.9 106 80.2
FAN02G0430 Fragaria x ananassa HOM05D007056 ORTHO05D008278 4.2e-41 172.6 168 57.7
Nitab4.5_0001440g0050 Nicotiana tabacum HOM05D007056 ORTHO05D008278 9.4e-41 171.4 94 78.7
Haze_20013 Corylus avellana HOM05D007056 ORTHO05D008278 2.7e-40 169.9 485 30.5
PRCOL_00003183 Prasinoderma coloniale HOM05D007056 ORTHO05D008278 2.8e-32 143.3 215 42.3
Hma1.2p1_0645F.1_g194860 Hydrangea macrophylla HOM05D007056 ORTHO05D008278 6.1e-32 142.1 73 83.6
ECA233G2032 Erigeron canadensis HOM05D007056 ORTHO05D008278 3.4e-30 136.3 76 80.3
SHI31778 Sapria himalayana HOM05D007056 ORTHO05D008278 1.2e-27 127.9 72 75.0
vmacro22990 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 1.7e-18 97.4 96 55.2
SHI31775 Sapria himalayana HOM05D000002 ORTHO05D000001 3.3e-09 66.6 49 73.5
Rhsim04G0095100 Rhododendron simsii HOM05D003299 ORTHO05D003811 9.9e-06 55.1 36 75.0


User provided reference genes

Program Settings