Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g15170 Coffea canephora HOM05D006119 ORTHO05D007641 2.6e-52 208.4 102 100.0
Sopen12g005020 Solanum pennellii HOM05D006119 ORTHO05D007641 1.0e-43 179.9 102 84.3
Peaxi162Scf00062g00419 Petunia axillaris HOM05D006119 ORTHO05D007641 1.3e-43 179.5 102 85.3
PGSC0003DMG400007897 Solanum tuberosum HOM05D006119 ORTHO05D007641 1.3e-43 179.5 102 84.3
Dinv43227 Davidia involucrata HOM05D006119 ORTHO05D007641 5.0e-43 177.6 102 83.3
Dinv42873 Davidia involucrata HOM05D006119 ORTHO05D007641 1.5e-42 176.0 101 82.2
Solyc12g010150.3 Solanum lycopersicum HOM05D006119 ORTHO05D007641 2.5e-42 175.3 99 83.8
Hma1.2p1_0028F.1_g017420 Hydrangea macrophylla HOM05D006119 ORTHO05D007641 3.2e-42 174.9 100 80.0
Oeu038007.1 Olea europaea HOM05D006119 ORTHO05D007641 5.5e-42 174.1 100 83.0
Oeu021261.1 Olea europaea HOM05D006119 ORTHO05D007641 1.4e-40 169.5 99 81.8
GSVIVG01023584001 Vitis vinifera HOM05D006119 ORTHO05D007641 1.4e-40 169.5 102 78.4
Actinidia04288 Actinidia chinensis HOM05D006119 ORTHO05D007641 4.0e-40 167.9 102 76.5
TAR626G1228 Trochodendron aralioides HOM05D006119 ORTHO05D007641 2.0e-39 165.6 100 76.0
CSS0002774 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 2.6e-39 165.2 100 77.0
CSS0027400 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 2.6e-39 165.2 100 77.0
Migut.K00337 Erythranthe guttata HOM05D006119 ORTHO05D007641 3.3e-39 164.9 100 78.0
MSTRG.26287 Avicennia marina HOM05D006119 ORTHO05D007641 4.4e-39 164.5 102 77.5
SGA_v2.0_scaffold206G41813 Striga asiatica HOM05D006119 ORTHO05D007641 4.4e-39 164.5 100 75.0
Nn8g39847 Nelumbo nucifera HOM05D006119 ORTHO05D007641 5.7e-39 164.1 102 77.5
Lsat_1_v5_gn_5_91501 Lactuca sativa HOM05D006119 ORTHO05D007641 7.5e-39 163.7 100 78.0
Actinidia23551 Actinidia chinensis HOM05D006119 ORTHO05D007641 1.7e-38 162.5 100 76.0
Glyma.02G202700 Glycine max HOM05D006119 ORTHO05D007641 8.2e-38 160.2 102 75.5
Lalb_Chr07g0179791 Lupinus albus HOM05D006119 ORTHO05D007641 8.2e-38 160.2 102 74.5
arahy.Tifrunner.gnm1.ann1.I28AR0 Arachis hypogaea HOM05D006119 ORTHO05D007641 2.4e-37 158.7 100 73.0
arahy.Tifrunner.gnm1.ann1.TAM15G Arachis hypogaea HOM05D006119 ORTHO05D007641 4.1e-37 157.9 100 73.0
Nitab4.5_0004815g0030 Nicotiana tabacum HOM05D006119 ORTHO05D007641 4.1e-37 157.9 122 65.6
SalBow1G1238 Salvia bowleyana HOM05D006119 ORTHO05D007641 4.1e-37 157.9 100 74.0
Haze_19227 Corylus avellana HOM05D006119 ORTHO05D007641 5.3e-37 157.5 100 75.0
Sopen07g001370 Solanum pennellii HOM05D006119 ORTHO05D007641 7.0e-37 157.1 100 73.0
Lj4g0015042 Lotus japonicus HOM05D006119 ORTHO05D007641 9.1e-37 156.8 100 73.0
Cfa020842 Carpinus fangiana HOM05D006119 ORTHO05D007641 1.2e-36 156.4 100 74.0
CiPaw.15G174900 Carya illinoinensis HOM05D006119 ORTHO05D007641 1.2e-36 156.4 100 74.0
TAR625G1054 Trochodendron aralioides HOM05D006119 ORTHO05D007641 1.2e-36 156.4 100 73.0
Gohir.A05G052000 Gossypium hirsutum HOM05D006119 ORTHO05D007641 2.0e-36 155.6 102 72.5
Gohir.D05G053500 Gossypium hirsutum HOM05D006119 ORTHO05D007641 2.0e-36 155.6 102 72.5
Solyc07g005410.3 Solanum lycopersicum HOM05D006119 ORTHO05D007641 2.0e-36 155.6 100 72.0
CAN.G1116.12 Capsicum annuum HOM05D006119 ORTHO05D007641 2.7e-36 155.2 98 73.5
CDE05G1219 Ceratophyllum demersum HOM05D006119 ORTHO05D007641 2.7e-36 155.2 100 71.0
Manes.06G037000 Manihot esculenta HOM05D006119 ORTHO05D007641 2.7e-36 155.2 100 72.0
Thecc.09G032800 Theobroma cacao HOM05D006119 ORTHO05D007641 2.7e-36 155.2 100 74.0
Aqoxy7G03440 Aquilegia oxysepala HOM05D006119 ORTHO05D007641 3.5e-36 154.8 100 72.0
Cpa.g.sc46.139 Carica papaya HOM05D006119 ORTHO05D007641 3.5e-36 154.8 102 69.6
Hund00673 Selenicereus undatus HOM05D006119 ORTHO05D007641 4.5e-36 154.5 98 74.5
Gorai.009G055300 Gossypium raimondii HOM05D006119 ORTHO05D007641 1.0e-35 153.3 100 72.0
QL02p092825 Quercus lobata HOM05D006119 ORTHO05D007641 1.0e-35 153.3 100 72.0
MBI15_g26716_MAGBIO Magnolia biondii HOM05D006119 ORTHO05D007641 1.7e-35 152.5 101 71.3
Psat0ss6646g0160 Pisum sativum HOM05D006119 ORTHO05D007641 1.7e-35 152.5 104 70.2
TWI63G1376 Tripterygium wilfordii HOM05D006119 ORTHO05D007641 1.7e-35 152.5 102 69.6
ECA234G1280 Erigeron canadensis HOM05D006119 ORTHO05D007641 2.9e-35 151.8 100 71.0
Potri.006G186500 Populus trichocarpa HOM05D006119 ORTHO05D007641 2.9e-35 151.8 100 71.0
Rhsim01G0035400 Rhododendron simsii HOM05D006119 ORTHO05D007641 3.8e-35 151.4 94 74.5
RhsimUnG0039700 Rhododendron simsii HOM05D006119 ORTHO05D007641 3.8e-35 151.4 94 74.5
PGR102G3064 Punica granatum HOM05D006119 ORTHO05D007641 6.5e-35 150.6 100 71.0
Peaxi162Scf00347g01022 Petunia axillaris HOM05D006119 ORTHO05D007641 8.5e-35 150.2 100 71.0
Duzib187G0693 Durio zibethinus HOM05D006119 ORTHO05D007641 1.1e-34 149.8 101 68.3
Sc18g0007620 Simmondsia chinensis HOM05D006119 ORTHO05D007641 1.1e-34 149.8 103 69.9
unitig_899.g15448 Utricularia gibba HOM05D006119 ORTHO05D007641 1.1e-34 149.8 89 78.7
COL.COLO4_18789 Corchorus olitorius HOM05D006119 ORTHO05D007641 1.5e-34 149.4 100 68.0
PSO111G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 2.5e-34 148.7 100 69.0
Sabra18G0092300 Salix brachista HOM05D006119 ORTHO05D007641 3.2e-34 148.3 100 69.0
vmacro06086 Vaccinium macrocarpon HOM05D006119 ORTHO05D007641 4.2e-34 147.9 111 66.7
PSO561G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 5.5e-34 147.5 100 69.0
Potri.018G109400 Populus trichocarpa HOM05D006119 ORTHO05D007641 5.5e-34 147.5 100 69.0
MD15G1154500 Malus domestica HOM05D006119 ORTHO05D007641 2.1e-33 145.6 102 66.7
HPP92_017474 Vanilla planifolia HOM05D006119 ORTHO05D007641 2.7e-33 145.2 87 73.6
Nitab4.5_0001478g0060 Nicotiana tabacum HOM05D006119 ORTHO05D007641 3.6e-33 144.8 101 73.3
Ca_21116_v3 Cicer arietinum L. HOM05D006119 ORTHO05D007641 4.7e-33 144.4 100 67.0
Nitab4.5_0002315g0130 Nicotiana tabacum HOM05D006119 ORTHO05D007641 6.1e-33 144.1 100 74.0
Rhsim03G0256600 Rhododendron simsii HOM05D006119 ORTHO05D007641 6.1e-33 144.1 116 63.8
Nitab4.5_0001813g0020 Nicotiana tabacum HOM05D006119 ORTHO05D007641 8.0e-33 143.7 88 77.3
CANSAT11G0807 Cannabis sativa HOM05D006119 ORTHO05D007641 1.0e-32 143.3 102 66.7
Atru.chr7.85 Acer truncatum HOM05D006119 ORTHO05D007641 1.4e-32 142.9 100 66.0
Ciclev10009941m.g Citrus clementina HOM05D006119 ORTHO05D007641 2.3e-32 142.1 100 68.0
CARHR271810 Cardamine hirsuta HOM05D006119 ORTHO05D007641 3.0e-32 141.7 100 64.0
Aa31LG3G13820 Aethionema arabicum HOM05D006119 ORTHO05D007641 4.0e-32 141.4 100 65.0
BcaB01g04471 Brassica carinata HOM05D006119 ORTHO05D007641 4.0e-32 141.4 100 64.0
Thhalv10015049m.g Eutrema salsugineum HOM05D006119 ORTHO05D007641 4.0e-32 141.4 100 65.0
Phvul.003G157000 Phaseolus vulgaris HOM05D006119 ORTHO05D007641 4.0e-32 141.4 98 66.3
AL8G34100 Arabidopsis lyrata HOM05D006119 ORTHO05D007641 5.2e-32 141.0 100 64.0
Prupe.7G260900 Prunus persica HOM05D006119 ORTHO05D007641 5.2e-32 141.0 102 65.7
AT5G58005 Arabidopsis thaliana HOM05D006119 ORTHO05D007641 8.8e-32 140.2 100 64.0
C03p14650 Brassica napus HOM05D006119 ORTHO05D007641 1.2e-31 139.8 100 64.0
Eucgr.C02591 Eucalyptus grandis HOM05D006119 ORTHO05D007641 1.2e-31 139.8 99 62.6
Eucgr.L03135 Eucalyptus grandis HOM05D006119 ORTHO05D007641 1.5e-31 139.4 97 62.9
TPR.G39188 Trifolium pratense HOM05D006119 ORTHO05D007641 2.6e-31 138.7 103 68.0
ATR0739G093 Amborella trichopoda HOM05D006119 ORTHO05D007641 3.4e-31 138.3 92 66.3
Medtr4g131150 Medicago truncatula HOM05D006119 ORTHO05D007641 5.7e-31 137.5 102 66.7
Nitab4.5_0006408g0020 Nicotiana tabacum HOM05D006119 ORTHO05D007641 5.7e-31 137.5 74 79.7
Actinidia38675 Actinidia chinensis HOM05D006119 ORTHO05D007641 7.5e-31 137.1 81 75.3
Zm00001eb041130 Zea mays HOM05D006119 ORTHO05D007641 7.5e-31 137.1 87 67.8
Carub.0008s1855 Capsella rubella HOM05D006119 ORTHO05D007641 9.8e-31 136.7 100 61.0
Sed0003082 Sechium edule HOM05D006119 ORTHO05D007641 9.8e-31 136.7 100 64.0
Nitab4.5_0013449g0010 Nicotiana tabacum HOM05D006119 ORTHO05D007641 1.7e-30 136.0 88 75.0
ClCG06G012280 Citrullus lanatus HOM05D006119 ORTHO05D007641 2.8e-30 135.2 100 62.0
HanXRQChr10g0314681 Helianthus annuus HOM05D006119 ORTHO05D007641 3.7e-30 134.8 100 66.0
MD02G1009100 Malus domestica HOM05D006119 ORTHO05D007641 3.7e-30 134.8 102 63.7
RcHm_v2.0_Chr2g0085901 Rosa chinensis HOM05D006119 ORTHO05D007641 3.7e-30 134.8 102 62.7
FvH4_1g01100 Fragaria vesca HOM05D006119 ORTHO05D007641 4.8e-30 134.4 100 63.0
FAN19G0026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 4.8e-30 134.4 100 63.0
CsaV3_1G028790 Cucumis sativus L. HOM05D006119 ORTHO05D007641 6.3e-30 134.0 99 61.6
Manes.14G112500 Manihot esculenta HOM05D006119 ORTHO05D007641 6.3e-30 134.0 87 69.0
FAN26G3335 Fragaria x ananassa HOM05D006119 ORTHO05D007641 8.3e-30 133.7 100 63.0
FAN28G1026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 8.3e-30 133.7 100 63.0
FAN23G1211 Fragaria x ananassa HOM05D006119 ORTHO05D007641 1.4e-29 132.9 100 62.0
Os08g0441400 Oryza sativa ssp. japonica HOM05D006119 ORTHO05D007641 3.1e-29 131.7 90 64.4
A03p12450 Brassica napus HOM05D000882 ORTHO05D001142 7.0e-29 130.6 94 61.7
BolC3t13907H Brassica oleracea HOM05D000882 ORTHO05D001142 7.0e-29 130.6 94 61.7
BraA03t10560Z Brassica rapa HOM05D000882 ORTHO05D001142 7.0e-29 130.6 94 61.7
MELO3C029440.2 Cucumis melo HOM05D006119 ORTHO05D007641 1.6e-28 129.4 111 56.8
DCAR_020878 Daucus carota HOM05D006119 ORTHO05D007641 2.0e-28 129.0 81 71.6
PGSC0003DMG400011173 Solanum tuberosum HOM05D006119 ORTHO05D007641 2.0e-28 129.0 74 75.7
AUR62043251 Chenopodium quinoa HOM05D006119 ORTHO05D007641 1.7e-27 125.9 94 61.7
EL10Ac8g18851 Beta vulgaris HOM05D006119 ORTHO05D007641 2.3e-27 125.6 94 60.6
CAN.G551.35 Capsicum annuum HOM05D006119 ORTHO05D007641 3.8e-27 124.8 75 81.3
Mapoly0012s0137 Marchantia polymorpha HOM05D006119 ORTHO05D007641 1.2e-23 113.2 85 56.5
Glyma.17G075100 Glycine max HOM05D006119 ORTHO05D007641 4.4e-23 111.3 73 72.6
Pp3c18_18500 Physcomitrium patens HOM05D006119 ORTHO05D007641 1.1e-21 106.7 101 51.5
Sed0018834 Sechium edule HOM05D006119 ORTHO05D007641 1.2e-20 103.2 73 61.6
Sp6g19680 Schrenkiella parvula HOM05D006119 ORTHO05D007641 1.0e-19 100.1 75 61.3
SMO137G0238 Selaginella moellendorffii HOM05D006119 ORTHO05D007641 2.9e-19 98.6 93 51.6
Aqoxy4G01852 Aquilegia oxysepala HOM05D006119 ORTHO05D007641 5.0e-19 97.8 58 74.1
Pp3c21_10430 Physcomitrium patens HOM05D006119 ORTHO05D007641 6.6e-19 97.4 96 47.9
AagrBONN_evm.TU.Sc2ySwM_228.1886 Anthoceros agrestis HOM05D006119 ORTHO05D007641 9.5e-18 93.6 66 59.1
SEGI_38164 Sequoiadendron giganteum HOM05D006119 ORTHO05D007641 9.5e-18 93.6 63 66.7
Nitab4.5_0003612g0050 Nicotiana tabacum HOM05D006119 ORTHO05D007641 1.0e-16 90.1 65 66.2
CDE05G1090 Ceratophyllum demersum HOM05D006119 ORTHO05D007641 1.4e-13 79.7 66 57.6
BcaNung07255 Brassica carinata HOM05D000882 ORTHO05D001142 7.8e-12 73.9 48 62.5
MBI15_g07754_MAGBIO Magnolia biondii HOM05D006119 ORTHO05D007641 3.6e-09 65.1 65 52.3
Pp3c22_3250 Physcomitrium patens HOM05D006119 ORTHO05D007641 2.3e-08 62.4 71 45.1
PSO339G5888 Papaver somniferum HOM05D006119 ORTHO05D007641 3.4e-07 58.5 82 39.0
Rhsim04G0128900 Rhododendron simsii HOM05D002149 ORTHO05D002154 3.4e-07 58.5 38 68.4


User provided reference genes

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