Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g14960 Coffea canephora HOM05D005968 ORTHO05D007158 2.2e-90 335.5 160 100.0
Sopen07g001730 Solanum pennellii HOM05D005968 ORTHO05D007158 3.1e-63 245.4 126 91.3
Solyc07g005620.2 Solanum lycopersicum HOM05D005968 ORTHO05D007158 6.8e-63 244.2 126 90.5
HanXRQChr09g0245781 Helianthus annuus HOM05D005968 ORTHO05D007158 5.8e-62 241.1 130 86.2
Hma1.2p1_0222F.1_g093590 Hydrangea macrophylla HOM05D005968 ORTHO05D007158 7.5e-62 240.7 129 88.4
PGSC0003DMG400011184 Solanum tuberosum HOM05D005968 ORTHO05D007158 9.8e-62 240.4 123 91.1
MD02G1007400 Malus domestica HOM05D005968 ORTHO05D007158 8.3e-61 237.3 125 88.0
Dinv43246 Davidia involucrata HOM05D005968 ORTHO05D007158 1.4e-60 236.5 126 88.9
Manes.14G143600 Manihot esculenta HOM05D005968 ORTHO05D007158 1.9e-60 236.1 124 89.5
Potri.006G184300 Populus trichocarpa HOM05D005968 ORTHO05D007158 1.9e-60 236.1 124 87.9
MD15G1144700 Malus domestica HOM05D005968 ORTHO05D007158 3.2e-60 235.3 125 88.0
Oeu038141.1 Olea europaea HOM05D005968 ORTHO05D007158 3.2e-60 235.3 126 87.3
Prupe.7G263000 Prunus persica HOM05D005968 ORTHO05D007158 4.1e-60 235.0 122 89.3
PGR102G1528 Punica granatum HOM05D005968 ORTHO05D007158 4.1e-60 235.0 123 90.2
CSS0021374 Camellia sinensis var. sinensis HOM05D005968 ORTHO05D007158 9.2e-60 233.8 122 91.0
Potri.018G106700 Populus trichocarpa HOM05D005968 ORTHO05D007158 9.2e-60 233.8 124 87.1
ECA236G4418 Erigeron canadensis HOM05D005968 ORTHO05D007158 3.5e-59 231.9 123 86.2
Psat0s2403g0360 Pisum sativum HOM05D005968 ORTHO05D007158 3.5e-59 231.9 131 82.4
Dinv42854 Davidia involucrata HOM05D005968 ORTHO05D007158 4.6e-59 231.5 122 89.3
Dinv41378 Davidia involucrata HOM05D005968 ORTHO05D007158 7.8e-59 230.7 123 87.8
DCAR_019393 Daucus carota HOM05D005968 ORTHO05D007158 1.0e-58 230.3 122 87.7
GSVIVG01023605001 Vitis vinifera HOM05D005968 ORTHO05D007158 1.0e-58 230.3 127 84.3
Migut.K00326 Erythranthe guttata HOM05D005968 ORTHO05D007158 1.7e-58 229.6 124 86.3
Gohir.D08G273400 Gossypium hirsutum HOM05D005968 ORTHO05D007158 3.0e-58 228.8 124 85.5
Duzib187G1838 Durio zibethinus HOM05D005968 ORTHO05D007158 3.9e-58 228.4 123 84.6
Gorai.004G291800 Gossypium raimondii HOM05D005968 ORTHO05D007158 3.9e-58 228.4 123 86.2
Thecc.09G030600 Theobroma cacao HOM05D005968 ORTHO05D007158 5.1e-58 228.0 124 83.9
CiPaw.15G168400 Carya illinoinensis HOM05D005968 ORTHO05D007158 6.6e-58 227.6 124 85.5
Atru.chr7.47_Atru.chr7.48 Acer truncatum HOM05D005968 ORTHO05D007158 8.6e-58 227.3 123 86.2
RcHm_v2.0_Chr2g0085621 Rosa chinensis HOM05D005968 ORTHO05D007158 8.6e-58 227.3 125 83.2
Lalb_Chr12g0198701 Lupinus albus HOM05D005968 ORTHO05D007158 1.5e-57 226.5 125 84.0
Glyma.02G204100 Glycine max HOM05D005968 ORTHO05D007158 1.9e-57 226.1 124 84.7
Gohir.A08G251800 Gossypium hirsutum HOM05D005968 ORTHO05D007158 1.9e-57 226.1 124 84.7
CANSAT11G2689 Cannabis sativa HOM05D005968 ORTHO05D007158 2.5e-57 225.7 123 85.4
TPR.G24874 Trifolium pratense HOM05D005968 ORTHO05D007158 2.5e-57 225.7 125 83.2
Ciclev10008980m.g Citrus clementina HOM05D005968 ORTHO05D007158 3.3e-57 225.3 123 84.6
Medtr4g130840 Medicago truncatula HOM05D005968 ORTHO05D007158 4.3e-57 224.9 125 83.2
Peaxi162Scf00401g00718 Petunia axillaris HOM05D005968 ORTHO05D007158 4.3e-57 224.9 116 90.5
Glyma.17G073700 Glycine max HOM05D005968 ORTHO05D007158 9.5e-57 223.8 124 83.1
Lj4g0027447 Lotus japonicus HOM05D005968 ORTHO05D007158 9.5e-57 223.8 123 85.4
Nn8g39893 Nelumbo nucifera HOM05D005968 ORTHO05D007158 9.5e-57 223.8 123 85.4
SalBow1G6433 Salvia bowleyana HOM05D005968 ORTHO05D007158 9.5e-57 223.8 126 84.1
Eucgr.C02493 Eucalyptus grandis HOM05D005968 ORTHO05D007158 2.8e-56 222.2 123 83.7
FAN23G3092 Fragaria x ananassa HOM05D005968 ORTHO05D007158 3.6e-56 221.9 124 83.9
FAN26G1763 Fragaria x ananassa HOM05D005968 ORTHO05D007158 4.7e-56 221.5 125 83.2
Lj7A459G65 Lonicera japonica HOM05D005968 ORTHO05D007158 8.1e-56 220.7 134 79.9
FvH4_1g00920 Fragaria vesca HOM05D005968 ORTHO05D007158 1.1e-55 220.3 122 85.2
Lsat_1_v5_gn_8_63401 Lactuca sativa HOM05D005968 ORTHO05D007158 1.8e-55 219.5 117 87.2
PSO561G0082 Papaver somniferum HOM05D005968 ORTHO05D007158 1.8e-55 219.5 123 82.1
CiPaw.16G111000 Carya illinoinensis HOM05D005968 ORTHO05D007158 2.3e-55 219.2 118 84.7
PSO111G0029 Papaver somniferum HOM05D005968 ORTHO05D007158 3.1e-55 218.8 123 82.1
Sp7g28770 Schrenkiella parvula HOM05D005968 ORTHO05D007158 3.1e-55 218.8 123 81.3
Sed0018428 Sechium edule HOM05D005968 ORTHO05D007158 3.1e-55 218.8 123 83.7
Nn2g12378 Nelumbo nucifera HOM05D005968 ORTHO05D007158 4.0e-55 218.4 122 83.6
TAR626G1902 Trochodendron aralioides HOM05D005968 ORTHO05D007158 4.0e-55 218.4 119 83.2
CARHR238800 Cardamine hirsuta HOM05D005968 ORTHO05D007158 8.9e-55 217.2 122 80.3
Thhalv10025727m.g Eutrema salsugineum HOM05D005968 ORTHO05D007158 1.5e-54 216.5 123 81.3
DCAR_017911 Daucus carota HOM05D005968 ORTHO05D007158 2.0e-54 216.1 129 78.3
QL02p093270 Quercus lobata HOM05D005968 ORTHO05D007158 2.6e-54 215.7 124 79.8
MELO3C010224.2 Cucumis melo HOM05D005968 ORTHO05D007158 7.5e-54 214.2 135 77.0
ClCG06G012410 Citrullus lanatus HOM05D005968 ORTHO05D007158 9.9e-54 213.8 135 77.8
THA.LOC104803560 Tarenaya hassleriana HOM05D005968 ORTHO05D007158 4.9e-53 211.5 123 79.7
Carub.0007s0964 Capsella rubella HOM05D005968 ORTHO05D007158 6.4e-53 211.1 123 78.0
AL7G21190 Arabidopsis lyrata HOM05D005968 ORTHO05D007158 1.1e-52 210.3 123 78.0
HPP92_004698 Vanilla planifolia HOM05D005968 ORTHO05D007158 1.4e-52 209.9 127 81.1
arahy.Tifrunner.gnm1.ann1.D6JQQQ Arachis hypogaea HOM05D005968 ORTHO05D007158 1.9e-52 209.5 113 85.8
Os05g0279600 Oryza sativa ssp. japonica HOM05D005968 ORTHO05D007158 1.9e-52 209.5 126 76.2
Zm00001eb086780 Zea mays HOM05D005968 ORTHO05D007158 7.1e-52 207.6 124 76.6
Zm00001eb420110 Zea mays HOM05D005968 ORTHO05D007158 7.1e-52 207.6 123 77.2
Sabra06G0140100 Salix brachista HOM05D005968 ORTHO05D007158 1.2e-51 206.8 200 56.0
C01p08040 Brassica napus HOM05D005968 ORTHO05D007158 2.1e-51 206.1 127 77.2
BcaC09g51877 Brassica carinata HOM05D005968 ORTHO05D007158 3.5e-51 205.3 127 77.2
A01p07280 Brassica napus HOM05D005968 ORTHO05D007158 3.5e-51 205.3 127 77.2
BraA01t00677Z Brassica rapa HOM05D005968 ORTHO05D007158 3.5e-51 205.3 127 77.2
Sabra18G0090900 Salix brachista HOM05D005968 ORTHO05D007158 6.0e-51 204.5 173 61.8
Aqoxy2G01962_Aqoxy2G01963 Aquilegia oxysepala HOM05D005968 ORTHO05D007158 7.8e-51 204.1 127 77.2
BolC1t00793H Brassica oleracea HOM05D005968 ORTHO05D007158 7.8e-51 204.1 127 76.4
AT4G30900 Arabidopsis thaliana HOM05D005968 ORTHO05D007158 1.0e-50 203.8 123 76.4
EL10Ac8g18668 Beta vulgaris HOM05D005968 ORTHO05D007158 1.0e-50 203.8 123 78.0
Cpa.g.sc46.156 Carica papaya HOM05D005968 ORTHO05D007158 5.1e-50 201.4 146 69.2
Cfa020826 Carpinus fangiana HOM05D002374 ORTHO05D003594 5.1e-50 201.4 107 85.0
BcaNung03430 Brassica carinata HOM05D005968 ORTHO05D007158 8.6e-50 200.7 124 75.8
VMungo1215G2113 Vigna mungo HOM05D005968 ORTHO05D007158 1.5e-49 199.9 114 78.9
Ca_21128_v3 Cicer arietinum L. HOM05D005968 ORTHO05D007158 2.5e-49 199.1 113 82.3
Aa31LG2G19470 Aethionema arabicum HOM05D005968 ORTHO05D007158 3.6e-48 195.3 117 76.9
CiPaw.15G168700 Carya illinoinensis HOM05D005968 ORTHO05D007158 8.9e-47 190.7 117 76.9
Mapoly0088s0077 Marchantia polymorpha HOM05D005968 ORTHO05D007158 7.3e-41 171.0 121 62.0
SEGI_19747 Sequoiadendron giganteum HOM05D005968 ORTHO05D007158 7.3e-41 171.0 126 64.3
TWI34G0179 Tripterygium wilfordii HOM05D005968 ORTHO05D007158 9.0e-39 164.1 90 82.2
ATR0739G020 Amborella trichopoda HOM05D005968 ORTHO05D007158 2.4e-36 156.0 89 79.8
COL.COLO4_18810 Corchorus olitorius HOM05D000238 ORTHO05D007158 1.2e-35 153.7 87 80.5
unitig_52.g17565 Utricularia gibba HOM05D005968 ORTHO05D007158 5.1e-34 148.3 113 64.6
CsaV3_1G028970 Cucumis sativus L. HOM05D005968 ORTHO05D007158 6.6e-34 147.9 90 75.6
AagrBONN_evm.TU.Sc2ySwM_362.192 Anthoceros agrestis HOM05D005968 ORTHO05D007158 1.1e-33 147.1 111 59.5
Lsat_1_v5_gn_4_18741 Lactuca sativa HOM05D005968 ORTHO05D007158 3.3e-33 145.6 85 80.0
Phvul.003G156000 Phaseolus vulgaris HOM05D005968 ORTHO05D007158 9.6e-33 144.1 92 72.8
CDE04G1812 Ceratophyllum demersum HOM05D005968 ORTHO05D007158 3.6e-32 142.1 89 69.7
Actinidia38673 Actinidia chinensis HOM05D005968 ORTHO05D007158 9.0e-31 137.5 83 78.3
TAR636G0142 Trochodendron aralioides HOM05D002374 ORTHO05D003594 9.3e-28 127.5 92 68.5
AUR62029822 Chenopodium quinoa HOM05D005968 ORTHO05D007158 3.7e-24 115.5 68 75.0
Eucgr.C02541 Eucalyptus grandis HOM05D005968 ORTHO05D007158 2.0e-22 109.8 71 76.1
Lsat_1_v5_gn_7_66900 Lactuca sativa HOM05D005968 ORTHO05D007158 4.2e-20 102.1 81 63.0
AUR62006466 Chenopodium quinoa HOM05D005968 ORTHO05D007158 4.6e-19 98.6 54 77.8
Nitab4.5_0003623g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 5.1e-18 95.1 51 84.3
SGA_v2.0_scaffold347G49545 Striga asiatica HOM05D005968 ORTHO05D007158 5.6e-17 91.7 48 85.4
arahy.Tifrunner.gnm1.ann1.QXT71M Arachis hypogaea HOM05D005968 ORTHO05D007158 6.9e-15 84.7 46 82.6
arahy.Tifrunner.gnm1.ann1.VCSM30 Arachis hypogaea HOM05D005968 ORTHO05D007158 2.9e-13 79.3 47 74.5
arahy.Tifrunner.gnm1.ann1.4WLG0J Arachis hypogaea HOM05D005968 ORTHO05D007158 6.5e-13 78.2 62 62.9
Haze_19213 Corylus avellana HOM05D000344 ORTHO05D005296 1.6e-11 73.6 71 53.5
Oeu038782.2 Olea europaea HOM05D005968 ORTHO05D007158 7.9e-11 71.2 56 64.3
arahy.Tifrunner.gnm1.ann1.HGKJ8P Arachis hypogaea HOM05D005968 ORTHO05D007158 1.8e-10 70.1 40 77.5


User provided reference genes

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