Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g14590 Coffea canephora HOM05D006914 ORTHO05D008583 4.4e-59 231.1 119 100.0
Oeu055276.1 Olea europaea HOM05D006914 ORTHO05D008583 1.9e-41 172.6 116 79.3
MSTRG.10711 Avicennia marina HOM05D006914 ORTHO05D008583 2.4e-41 172.2 118 78.8
Oeu021334.1 Olea europaea HOM05D006914 ORTHO05D008583 3.2e-41 171.8 116 78.4
Nn8g40004 Nelumbo nucifera HOM05D006914 ORTHO05D008583 3.1e-36 155.2 103 77.7
Ah.13g066550 Amaranthus hybridus HOM05D006914 ORTHO05D008583 4.0e-36 154.8 103 77.7
Migut.K00305 Erythranthe guttata HOM05D006914 ORTHO05D008583 4.0e-36 154.8 114 73.7
Nitab4.5_0009003g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 4.0e-36 154.8 103 76.7
EL10Ac3g05865 Beta vulgaris HOM05D006914 ORTHO05D008583 5.3e-36 154.5 103 75.7
AUR62015440 Chenopodium quinoa HOM05D006914 ORTHO05D008583 9.0e-36 153.7 103 75.7
Hund04582 Selenicereus undatus HOM05D000185 ORTHO05D000105 9.0e-36 153.7 118 67.8
CSS0049762 Camellia sinensis var. sinensis HOM05D006914 ORTHO05D008583 2.6e-35 152.1 103 75.7
AUR62002229 Chenopodium quinoa HOM05D006914 ORTHO05D008583 4.5e-35 151.4 103 74.8
Hma1.2p1_2085F.1_g313670 Hydrangea macrophylla HOM05D006914 ORTHO05D008583 4.5e-35 151.4 102 74.5
Nitab4.5_0001448g0020 Nicotiana tabacum HOM05D006914 ORTHO05D008583 5.8e-35 151.0 103 75.7
Lalb_Chr11g0072501 Lupinus albus HOM05D006914 ORTHO05D008583 7.6e-35 150.6 104 76.9
ECA240G0809 Erigeron canadensis HOM05D006914 ORTHO05D008583 1.0e-34 150.2 103 77.7
Potri.006G181400 Populus trichocarpa HOM05D006914 ORTHO05D008583 1.0e-34 150.2 102 75.5
Cpa.g.sc46.184 Carica papaya HOM05D006914 ORTHO05D008583 2.2e-34 149.1 101 75.2
Lsat_1_v5_gn_7_49520 Lactuca sativa HOM05D006914 ORTHO05D008583 2.9e-34 148.7 103 75.7
Gohir.D08G256600 Gossypium hirsutum HOM05D006914 ORTHO05D008583 4.9e-34 147.9 103 75.7
Gorai.004G273700 Gossypium raimondii HOM05D006914 ORTHO05D008583 4.9e-34 147.9 103 75.7
Peaxi162Scf00156g01316 Petunia axillaris HOM05D006914 ORTHO05D008583 4.9e-34 147.9 101 74.3
Duzib150G1072 Durio zibethinus HOM05D006914 ORTHO05D008583 6.5e-34 147.5 103 76.7
Atru.chr7.325 Acer truncatum HOM05D006914 ORTHO05D008583 8.4e-34 147.1 100 74.0
Glyma.04G155300 Glycine max HOM05D006914 ORTHO05D008583 1.1e-33 146.7 104 74.0
CANSAT56G0295 Cannabis sativa HOM05D006914 ORTHO05D008583 1.4e-33 146.4 100 76.0
FAN23G1758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 1.4e-33 146.4 100 76.0
Thecc.09G152600 Theobroma cacao HOM05D006914 ORTHO05D008583 1.4e-33 146.4 103 75.7
Manes.14G142700 Manihot esculenta HOM05D006914 ORTHO05D008583 1.9e-33 146.0 96 74.0
TPR.G25932 Trifolium pratense HOM05D006914 ORTHO05D008583 1.9e-33 146.0 104 73.1
GSVIVG01008452001 Vitis vinifera HOM05D006914 ORTHO05D008583 1.9e-33 146.0 102 73.5
VMungo0720G1978 Vigna mungo HOM05D006914 ORTHO05D008583 2.5e-33 145.6 108 69.4
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 3.2e-33 145.2 95 74.7
HanXRQChr03g0066101 Helianthus annuus HOM05D006914 ORTHO05D008583 3.2e-33 145.2 103 74.8
unitig_748.g7196 Utricularia gibba HOM05D006914 ORTHO05D008583 3.2e-33 145.2 89 82.0
Dinv41349 Davidia involucrata HOM05D006914 ORTHO05D008583 4.2e-33 144.8 95 76.8
FAN26G2758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 4.2e-33 144.8 100 76.0
CiPaw.15G165400 Carya illinoinensis HOM05D006914 ORTHO05D008583 5.5e-33 144.4 103 74.8
Nitab4.5_0000233g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 7.1e-33 144.1 101 75.2
RcHm_v2.0_Chr2g0085261 Rosa chinensis HOM05D006914 ORTHO05D008583 7.1e-33 144.1 102 73.5
Ciclev10009995m.g Citrus clementina HOM05D006914 ORTHO05D008583 9.3e-33 143.7 103 72.8
COL.COLO4_23940 Corchorus olitorius HOM05D006914 ORTHO05D008583 9.3e-33 143.7 103 74.8
Duzib187G0910 Durio zibethinus HOM05D006914 ORTHO05D008583 1.2e-32 143.3 103 74.8
FvH4_1g00640 Fragaria vesca HOM05D006914 ORTHO05D008583 1.2e-32 143.3 100 75.0
Cfa020795 Carpinus fangiana HOM05D006914 ORTHO05D008583 1.6e-32 142.9 103 70.9
Prupe.7G265800 Prunus persica HOM05D006914 ORTHO05D008583 3.5e-32 141.7 103 75.7
QL02p093962 Quercus lobata HOM05D006914 ORTHO05D008583 3.5e-32 141.7 105 72.4
TWI34G0278 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 3.5e-32 141.7 100 74.0
Glyma.06G225000 Glycine max HOM05D006914 ORTHO05D008583 4.6e-32 141.4 104 72.1
Actinidia23563 Actinidia chinensis HOM05D006914 ORTHO05D008583 7.9e-32 140.6 92 77.2
Ca_02367_v3 Cicer arietinum L. HOM05D006914 ORTHO05D008583 7.9e-32 140.6 97 72.2
MD15G1149500 Malus domestica HOM05D006914 ORTHO05D008583 1.0e-31 140.2 103 73.8
PGR102G2895 Punica granatum HOM05D006914 ORTHO05D008583 1.0e-31 140.2 103 70.9
MD02G1005200 Malus domestica HOM05D006914 ORTHO05D008583 1.3e-31 139.8 100 74.0
Psat1g017920 Pisum sativum HOM05D006914 ORTHO05D008583 1.3e-31 139.8 102 68.6
Phvul.007G242700 Phaseolus vulgaris HOM05D006914 ORTHO05D008583 1.8e-31 139.4 101 71.3
AT5G57860 Arabidopsis thaliana HOM05D006914 ORTHO05D008583 3.0e-31 138.7 90 76.7
TWI63G1652 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 3.0e-31 138.7 100 73.0
Sopen05g034470 Solanum pennellii HOM05D006914 ORTHO05D008583 3.9e-31 138.3 91 75.8
AL8G33910 Arabidopsis lyrata HOM05D006914 ORTHO05D008583 5.1e-31 137.9 90 75.6
TAR383G0505 Trochodendron aralioides HOM05D006914 ORTHO05D008583 5.1e-31 137.9 90 80.0
Sp6g19550 Schrenkiella parvula HOM05D006914 ORTHO05D008583 8.7e-31 137.1 90 76.7
CARHR271600 Cardamine hirsuta HOM05D006914 ORTHO05D008583 1.1e-30 136.7 90 76.7
Medtr2g046160 Medicago truncatula HOM05D006914 ORTHO05D008583 1.1e-30 136.7 103 67.0
Actinidia28379 Actinidia chinensis HOM05D006914 ORTHO05D008583 1.5e-30 136.3 94 76.6
Carub.0008s1839 Capsella rubella HOM05D006914 ORTHO05D008583 1.9e-30 136.0 90 74.4
MELO3C004120.2 Cucumis melo HOM05D006914 ORTHO05D008583 1.9e-30 136.0 103 69.9
Aqoxy5G02159 Aquilegia oxysepala HOM05D006914 ORTHO05D008583 3.3e-30 135.2 101 71.3
Thhalv10015128m.g Eutrema salsugineum HOM05D006914 ORTHO05D008583 4.3e-30 134.8 90 74.4
Lj6g0027463 Lotus japonicus HOM05D006914 ORTHO05D008583 7.4e-30 134.0 104 65.4
ClCG02G014340 Citrullus lanatus HOM05D006914 ORTHO05D008583 1.6e-29 132.9 103 68.9
CsaV3_2G007660 Cucumis sativus L. HOM05D006914 ORTHO05D008583 1.6e-29 132.9 92 71.7
Sed0012601 Sechium edule HOM05D006914 ORTHO05D008583 2.8e-29 132.1 103 69.9
C02p13800 Brassica napus HOM05D006914 ORTHO05D008583 3.7e-29 131.7 90 73.3
BolC2t07499H Brassica oleracea HOM05D006914 ORTHO05D008583 3.7e-29 131.7 90 73.3
Sed0026010 Sechium edule HOM05D006914 ORTHO05D008583 3.1e-28 128.6 103 68.0
A03p12500 Brassica napus HOM05D006914 ORTHO05D008583 4.1e-28 128.3 90 71.1
BraA03t10565Z Brassica rapa HOM05D006914 ORTHO05D008583 4.1e-28 128.3 90 71.1
C09p49750 Brassica napus HOM05D006914 ORTHO05D008583 5.3e-28 127.9 90 71.1
BolC3t13912H Brassica oleracea HOM05D006914 ORTHO05D008583 5.3e-28 127.9 90 71.1
ATR0763G197 Amborella trichopoda HOM05D006914 ORTHO05D008583 6.9e-28 127.5 90 68.9
A02p08150 Brassica napus HOM05D006914 ORTHO05D008583 9.0e-28 127.1 90 71.1
PSO111G0010 Papaver somniferum HOM05D006914 ORTHO05D008583 1.2e-27 126.7 98 67.3
SGA_v2.0_scaffold222G42803 Striga asiatica HOM05D006914 ORTHO05D008583 3.4e-27 125.2 74 86.5
Os03g0364000 Oryza sativa ssp. japonica HOM05D006914 ORTHO05D008583 5.8e-27 124.4 91 72.5
HPP92_020604 Vanilla planifolia HOM05D006914 ORTHO05D008583 5.8e-27 124.4 90 70.0
Aa31LG3G13700 Aethionema arabicum HOM05D006914 ORTHO05D008583 7.6e-27 124.0 90 67.8
CDE05G0490 Ceratophyllum demersum HOM05D006914 ORTHO05D008583 7.6e-27 124.0 103 64.1
Zm00001eb329210 Zea mays HOM05D006914 ORTHO05D008583 6.5e-26 120.9 90 65.6
TAR626G0439 Trochodendron aralioides HOM05D006914 ORTHO05D008583 6.1e-24 114.4 74 81.1
BcaB05g22379 Brassica carinata HOM05D006914 ORTHO05D008583 1.3e-23 113.2 90 65.6
PGSC0003DMG400023462 Solanum tuberosum HOM05D006914 ORTHO05D008583 1.8e-23 112.8 74 77.0
Rhsim03G0258700 Rhododendron simsii HOM05D000079 ORTHO05D000211 3.9e-23 111.7 90 70.0
CAN.G694.81 Capsicum annuum HOM05D006914 ORTHO05D008583 5.1e-23 111.3 79 74.7
Eucgr.C02509 Eucalyptus grandis HOM05D006914 ORTHO05D008583 6.7e-23 110.9 74 78.4
Pp3c19_17380 Physcomitrium patens HOM05D006914 ORTHO05D008583 3.3e-22 108.6 91 63.7
vmacro06059 Vaccinium macrocarpon HOM05D000079 ORTHO05D000211 3.3e-22 108.6 74 75.7
arahy.Tifrunner.gnm1.ann1.6E7PQ4 Arachis hypogaea HOM05D006914 ORTHO05D008583 1.3e-21 106.7 75 72.0
arahy.Tifrunner.gnm1.ann1.S2MTQV Arachis hypogaea HOM05D006914 ORTHO05D008583 1.3e-21 106.7 74 73.0
BraA02t05889Z Brassica rapa HOM05D006914 ORTHO05D008583 1.6e-21 106.3 79 69.6
Haze_19153 Corylus avellana HOM05D006914 ORTHO05D008583 1.6e-21 106.3 74 71.6
PSO782G4630 Papaver somniferum HOM05D006914 ORTHO05D008583 1.4e-20 103.2 98 57.1
AagrBONN_evm.TU.Sc2ySwM_362.2477 Anthoceros agrestis HOM05D006914 ORTHO05D008583 1.8e-20 102.8 91 65.9
CBR_g51779 Chara braunii HOM05D006914 ORTHO05D008583 2.6e-19 99.0 92 56.5
SMO304G0019 Selaginella moellendorffii HOM05D006914 ORTHO05D008583 3.4e-19 98.6 73 69.9
Mapoly0004s0198 Marchantia polymorpha HOM05D006914 ORTHO05D008583 5.9e-19 97.8 76 68.4
Pp3c17_5060 Physcomitrium patens HOM05D006914 ORTHO05D008583 1.6e-16 89.7 99 53.5
Gohir.A08G236100 Gossypium hirsutum HOM05D006914 ORTHO05D008583 3.6e-16 88.6 62 71.0
Sc13g0007320 Simmondsia chinensis HOM05D006914 ORTHO05D008583 2.3e-15 85.9 62 72.6
Cre12.g554750 Chlamydomonas reinhardtii HOM05D006914 ORTHO05D008583 3.3e-14 82.0 85 51.8
BcaC04g19922 Brassica carinata HOM05D006914 ORTHO05D008583 1.3e-13 80.1 52 75.0
AagrBONN_evm.TU.Sc2ySwM_228.3148 Anthoceros agrestis HOM05D006914 ORTHO05D008583 3.7e-13 78.6 77 53.2
Haze_19154 Corylus avellana HOM05D002983 ORTHO05D003451 1.5e-11 73.2 67 61.2
PRCOL_00002080 Prasinoderma coloniale HOM05D006914 ORTHO05D008583 2.6e-11 72.4 96 49.0
SHI02838 Sapria himalayana HOM05D006914 ORTHO05D008583 4.5e-11 71.6 87 47.1
Aa31LG1G14450 Aethionema arabicum HOM05D006914 ORTHO05D008583 5.0e-10 68.2 73 50.7
BraA10t43605Z Brassica rapa HOM05D006914 ORTHO05D008583 2.0e-06 56.2 30 86.7
MCO12G243 Micromonas commoda HOM05D006914 ORTHO05D008583 2.6e-06 55.8 108 35.2


User provided reference genes

Program Settings