Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g14310 Coffea canephora HOM05D005031 ORTHO05D006098 2.1e-86 322.4 174 100.0
Oeu045637.1 Olea europaea HOM05D005031 ORTHO05D006098 1.3e-64 250.0 174 69.5
Hma1.2p1_1493F.1_g286836 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 3.9e-64 248.4 174 70.7
vmacro01000 Vaccinium macrocarpon HOM05D005031 ORTHO05D006098 3.9e-64 248.4 174 77.0
Oeu031856.2 Olea europaea HOM05D005031 ORTHO05D006098 1.1e-63 246.9 174 68.4
Solyc07g006150.3 Solanum lycopersicum HOM05D005031 ORTHO05D006098 2.5e-63 245.7 174 74.1
Sopen07g002260 Solanum pennellii HOM05D005031 ORTHO05D006098 2.5e-63 245.7 174 74.1
Nitab4.5_0001036g0100 Nicotiana tabacum HOM05D005031 ORTHO05D006098 5.7e-63 244.6 174 74.7
CAN.G1190.6 Capsicum annuum HOM05D005031 ORTHO05D006098 2.2e-62 242.7 174 67.2
Peaxi162Scf00038g00324 Petunia axillaris HOM05D005031 ORTHO05D006098 2.2e-62 242.7 174 68.4
SGA_v2.0_scaffold12G06032 Striga asiatica HOM05D005031 ORTHO05D006098 2.8e-62 242.3 174 75.9
Migut.K00291 Erythranthe guttata HOM05D005031 ORTHO05D006098 3.7e-62 241.9 174 75.3
Nitab4.5_0002545g0040 Nicotiana tabacum HOM05D005031 ORTHO05D006098 3.7e-62 241.9 174 73.6
SalBow1G8617 Salvia bowleyana HOM05D005031 ORTHO05D006098 4.8e-62 241.5 174 75.9
Actinidia33308 Actinidia chinensis HOM05D005031 ORTHO05D006098 6.3e-62 241.1 174 74.1
PGSC0003DMG400011218 Solanum tuberosum HOM05D005031 ORTHO05D006098 8.2e-62 240.7 174 74.1
Ciclev10012924m.g Citrus clementina HOM05D005031 ORTHO05D006098 3.1e-61 238.8 174 70.1
Hma1.2p1_2290F.1_g319050 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 6.9e-61 237.7 174 64.9
Manes.06G033000 Manihot esculenta HOM05D005031 ORTHO05D006098 1.2e-60 236.9 174 71.3
Actinidia38656 Actinidia chinensis HOM05D005031 ORTHO05D006098 1.5e-60 236.5 174 72.4
Hma1.2p1_2438F.1_g322190 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 1.3e-59 233.4 150 74.7
CiPaw.06G050600 Carya illinoinensis HOM05D005031 ORTHO05D006098 2.2e-59 232.6 174 69.5
MSTRG.10716 Avicennia marina HOM05D005031 ORTHO05D006098 2.9e-59 232.3 174 73.0
CSS0024126 Camellia sinensis var. sinensis HOM05D005031 ORTHO05D006098 5.0e-59 231.5 171 71.3
Duzib168G1565 Durio zibethinus HOM05D005031 ORTHO05D006098 5.0e-59 231.5 174 67.2
Rhsim03G0261100 Rhododendron simsii HOM05D005031 ORTHO05D006098 5.0e-59 231.5 196 68.4
Thecc.09G157500 Theobroma cacao HOM05D005031 ORTHO05D006098 5.0e-59 231.5 174 67.2
Nn8g40193 Nelumbo nucifera HOM05D005031 ORTHO05D006098 1.1e-58 230.3 174 66.1
TAR636G0261 Trochodendron aralioides HOM05D005031 ORTHO05D006098 1.1e-58 230.3 171 70.8
ECA234G3840 Erigeron canadensis HOM05D005031 ORTHO05D006098 1.9e-58 229.6 174 67.8
Gorai.004G106100 Gossypium raimondii HOM05D005031 ORTHO05D006098 1.9e-58 229.6 174 66.7
HanXRQChr10g0307831 Helianthus annuus HOM05D005031 ORTHO05D006098 1.9e-58 229.6 174 70.7
Dinv41325 Davidia involucrata HOM05D005031 ORTHO05D006098 2.5e-58 229.2 174 71.8
Medtr4g130180 Medicago truncatula HOM05D005031 ORTHO05D006098 3.2e-58 228.8 174 65.5
VMungo1215G0734 Vigna mungo HOM05D005031 ORTHO05D006098 3.2e-58 228.8 174 66.1
Duzib187G1655 Durio zibethinus HOM05D005031 ORTHO05D006098 4.2e-58 228.4 174 65.5
CSS0012616 Camellia sinensis var. sinensis HOM05D005031 ORTHO05D006098 5.5e-58 228.0 171 70.8
Ca_21160_v3 Cicer arietinum L. HOM05D005031 ORTHO05D006098 5.5e-58 228.0 174 66.1
Gohir.D08G098400 Gossypium hirsutum HOM05D005031 ORTHO05D006098 5.5e-58 228.0 174 66.7
GSVIVG01033204001 Vitis vinifera HOM05D005031 ORTHO05D006098 5.5e-58 228.0 174 64.9
COL.COLO4_10074 Corchorus olitorius HOM05D005031 ORTHO05D006098 7.2e-58 227.6 174 66.7
Phvul.003G152700 Phaseolus vulgaris HOM05D005031 ORTHO05D006098 9.4e-58 227.3 174 65.5
arahy.Tifrunner.gnm1.ann1.QFVN2V Arachis hypogaea HOM05D005031 ORTHO05D006098 1.2e-57 226.9 174 64.9
Duzib187G0728 Durio zibethinus HOM05D005031 ORTHO05D006098 1.2e-57 226.9 174 64.9
Potri.018G101100 Populus trichocarpa HOM05D005031 ORTHO05D006098 1.6e-57 226.5 174 64.9
Gohir.A08G087500 Gossypium hirsutum HOM05D005031 ORTHO05D006098 2.1e-57 226.1 174 66.1
Lj4g0007960 Lotus japonicus HOM05D005031 ORTHO05D006098 2.1e-57 226.1 175 65.1
Phvul.010G125500 Phaseolus vulgaris HOM05D005031 ORTHO05D006098 2.1e-57 226.1 174 64.9
Glyma.02G207700 Glycine max HOM05D005031 ORTHO05D006098 3.6e-57 225.3 174 64.4
TPR.G1244 Trifolium pratense HOM05D005031 ORTHO05D006098 6.1e-57 224.6 174 64.4
Glyma.17G070000 Glycine max HOM05D005031 ORTHO05D006098 1.0e-56 223.8 174 63.8
Eucgr.H00166 Eucalyptus grandis HOM05D005031 ORTHO05D006098 2.3e-56 222.6 174 63.8
EL10Ac7g17961 Beta vulgaris HOM05D005031 ORTHO05D006098 5.1e-56 221.5 174 63.8
TWI73G0469 Tripterygium wilfordii HOM05D005031 ORTHO05D006098 5.1e-56 221.5 174 64.4
Hund18050 Selenicereus undatus HOM05D005031 ORTHO05D006098 8.8e-56 220.7 174 66.1
Lj6g0018969 Lotus japonicus HOM05D005031 ORTHO05D006098 1.5e-55 219.9 174 63.2
RcHm_v2.0_Chr4g0405231 Rosa chinensis HOM05D005031 ORTHO05D006098 1.5e-55 219.9 174 62.6
Lalb_Chr07g0180011 Lupinus albus HOM05D005031 ORTHO05D006098 2.6e-55 219.2 175 64.0
Prupe.1G100400 Prunus persica HOM05D005031 ORTHO05D006098 2.6e-55 219.2 174 61.5
Atru.chr12.1707 Acer truncatum HOM05D005031 ORTHO05D006098 5.7e-55 218.0 174 67.2
Carub.0004s0310 Capsella rubella HOM05D005031 ORTHO05D006098 5.7e-55 218.0 174 63.8
FAN25G2017 Fragaria x ananassa HOM05D005031 ORTHO05D006098 5.7e-55 218.0 174 62.6
PGR031G2537 Punica granatum HOM05D005031 ORTHO05D006098 5.7e-55 218.0 174 62.6
AT2G23940 Arabidopsis thaliana HOM05D005031 ORTHO05D006098 9.7e-55 217.2 174 63.2
FvH4_3g25860 Fragaria vesca HOM05D005031 ORTHO05D006098 9.7e-55 217.2 174 62.6
FAN11G2096 Fragaria x ananassa HOM05D005031 ORTHO05D006098 9.7e-55 217.2 174 62.6
AL4G13970 Arabidopsis lyrata HOM05D005031 ORTHO05D006098 1.3e-54 216.9 174 63.2
PSO478G0084 Papaver somniferum HOM05D005031 ORTHO05D006098 1.3e-54 216.9 174 63.2
PSO017G4787 Papaver somniferum HOM05D005031 ORTHO05D006098 2.2e-54 216.1 174 63.8
A03p59910 Brassica napus HOM05D005031 ORTHO05D006098 2.8e-54 215.7 174 62.1
ClCG11G012690 Citrullus lanatus HOM05D005031 ORTHO05D006098 2.8e-54 215.7 174 67.2
MELO3C004109.2 Cucumis melo HOM05D005031 ORTHO05D006098 2.8e-54 215.7 174 65.5
Rhsim03G0260600 Rhododendron simsii HOM05D005031 ORTHO05D006098 2.8e-54 215.7 239 56.1
THA.LOC104803530 Tarenaya hassleriana HOM05D005031 ORTHO05D006098 2.8e-54 215.7 174 62.6
MD00G1059200 Malus domestica HOM05D005031 ORTHO05D006098 3.7e-54 215.3 174 61.5
BraA03t15048Z Brassica rapa HOM05D005031 ORTHO05D006098 4.8e-54 214.9 174 62.1
CARHR184610 Cardamine hirsuta HOM05D005031 ORTHO05D006098 6.3e-54 214.5 171 63.7
FAN21G1649 Fragaria x ananassa HOM05D005031 ORTHO05D006098 6.3e-54 214.5 174 62.1
RcHm_v2.0_Chr5g0047191 Rosa chinensis HOM05D005031 ORTHO05D006098 6.3e-54 214.5 174 61.5
Sed0023985 Sechium edule HOM05D005031 ORTHO05D006098 8.2e-54 214.2 174 64.4
ATR0580G158 Amborella trichopoda HOM05D005031 ORTHO05D006098 1.4e-53 213.4 174 62.1
BcaNung00560 Brassica carinata HOM05D005031 ORTHO05D006098 1.4e-53 213.4 174 61.5
BcaNung00561 Brassica carinata HOM05D005031 ORTHO05D006098 1.4e-53 213.4 174 61.5
C07p57970 Brassica napus HOM05D005031 ORTHO05D006098 1.4e-53 213.4 174 61.5
BolC7t46255H Brassica oleracea HOM05D005031 ORTHO05D006098 1.4e-53 213.4 174 61.5
C01p08550 Brassica napus HOM05D005031 ORTHO05D006098 1.8e-53 213.0 174 60.9
MD00G1091200 Malus domestica HOM05D005031 ORTHO05D006098 1.8e-53 213.0 174 61.5
Aqoxy5G00990 Aquilegia oxysepala HOM05D005031 ORTHO05D006098 2.4e-53 212.6 171 66.1
CsaV3_2G007780 Cucumis sativus L. HOM05D005031 ORTHO05D006098 2.4e-53 212.6 174 60.9
THA.LOC104819960 Tarenaya hassleriana HOM05D005031 ORTHO05D006098 2.4e-53 212.6 174 62.1
QL01p011713 Quercus lobata HOM05D005031 ORTHO05D006098 3.1e-53 212.2 173 66.5
PSO675G4517 Papaver somniferum HOM05D005031 ORTHO05D006098 4.1e-53 211.8 174 61.5
Sabra18G0087000 Salix brachista HOM05D005031 ORTHO05D006098 4.1e-53 211.8 194 58.2
Sp7g28380 Schrenkiella parvula HOM05D005031 ORTHO05D006098 9.1e-53 210.7 174 60.9
Aa31LG2G20010 Aethionema arabicum HOM05D005031 ORTHO05D006098 2.0e-52 209.5 174 59.8
CANSAT11G2524 Cannabis sativa HOM05D005031 ORTHO05D006098 2.0e-52 209.5 174 60.9
arahy.Tifrunner.gnm1.ann1.0TL0BP Arachis hypogaea HOM05D005031 ORTHO05D006098 2.6e-52 209.1 198 56.6
Thhalv10026393m.g Eutrema salsugineum HOM05D005031 ORTHO05D006098 2.6e-52 209.1 174 60.3
BcaC09g51840 Brassica carinata HOM05D005031 ORTHO05D006098 1.0e-51 207.2 174 59.8
A01p07680 Brassica napus HOM05D005031 ORTHO05D006098 1.0e-51 207.2 174 59.8
AL7G21640 Arabidopsis lyrata HOM05D005031 ORTHO05D006098 1.3e-51 206.8 174 59.2
BraA01t00711Z Brassica rapa HOM05D005031 ORTHO05D006098 1.3e-51 206.8 173 59.5
HPP92_025776 Vanilla planifolia HOM05D005031 ORTHO05D006098 3.8e-51 205.3 174 59.8
CDE05G2574 Ceratophyllum demersum HOM05D005031 ORTHO05D006098 8.5e-51 204.1 174 59.2
Zm00001eb186920 Zea mays HOM05D005031 ORTHO05D006098 3.2e-50 202.2 175 57.1
Atru.chr12.1715 Acer truncatum HOM05D005031 ORTHO05D006098 9.4e-50 200.7 143 66.4
AT4G30500 Arabidopsis thaliana HOM05D005031 ORTHO05D006098 2.7e-49 199.1 174 57.5
BolC1t00831H Brassica oleracea HOM05D005031 ORTHO05D006098 1.0e-48 197.2 166 60.2
BolC1t00837H Brassica oleracea HOM05D005031 ORTHO05D006098 1.0e-48 197.2 166 60.2
BolC1t00834H Brassica oleracea HOM05D005031 ORTHO05D006098 2.0e-47 193.0 150 64.0
TWI23G1034 Tripterygium wilfordii HOM05D005031 ORTHO05D006098 2.6e-47 192.6 158 60.8
MBI14_g16418_MAGBIO Magnolia biondii HOM05D005031 ORTHO05D006098 1.4e-45 186.8 146 63.7
Hma1.2p1_2725F.1_g327560 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 2.0e-44 183.0 122 68.9
Lsat_1_v5_gn_5_88201 Lactuca sativa HOM05D005031 ORTHO05D006098 4.5e-44 181.8 176 54.5
Sc05g0001840 Simmondsia chinensis HOM05D005031 ORTHO05D006098 9.4e-42 174.1 122 66.4
Psat0s2826g0160 Pisum sativum HOM05D005031 ORTHO05D006098 1.2e-41 173.7 122 68.0
Os02g0666800 Oryza sativa ssp. japonica HOM05D005031 ORTHO05D006098 1.6e-41 173.3 175 53.7
Sed0023066 Sechium edule HOM05D005031 ORTHO05D006098 3.6e-41 172.2 155 56.1
AagrBONN_evm.TU.Sc2ySwM_368.3216 Anthoceros agrestis HOM05D005031 ORTHO05D006098 3.0e-40 169.1 171 52.0
AUR62001168 Chenopodium quinoa HOM05D005031 ORTHO05D006098 8.8e-40 167.5 182 55.5
SMO164G0234 Selaginella moellendorffii HOM05D005031 ORTHO05D006098 7.5e-39 164.5 176 49.4
Pp3c11_17250 Physcomitrium patens HOM05D005031 ORTHO05D006098 2.4e-37 159.5 174 48.3
Mapoly0003s0226 Marchantia polymorpha HOM05D005031 ORTHO05D006098 4.1e-37 158.7 173 46.8
CBR_g3690 Chara braunii HOM05D005031 ORTHO05D006098 1.5e-31 140.2 173 44.5
AUR62022155 Chenopodium quinoa HOM05D005031 ORTHO05D006098 2.8e-30 136.0 94 68.1
Ah.08g218880 Amaranthus hybridus HOM05D005031 ORTHO05D006098 1.8e-29 133.3 94 67.0
Haze_21256 Corylus avellana HOM05D005031 ORTHO05D006098 5.9e-28 128.3 95 61.1
Cpa.g.sc743.3 Carica papaya HOM05D005031 ORTHO05D006098 2.9e-27 125.9 93 63.4
BcaNung01743 Brassica carinata HOM05D005031 ORTHO05D006098 5.5e-26 121.7 85 70.6
unitig_62.g23488 Utricularia gibba HOM05D005031 ORTHO05D006098 1.2e-23 114.0 85 80.0
BcaB04g19089 Brassica carinata HOM05D005031 ORTHO05D006098 8.3e-22 107.8 73 69.9
Lj7A465G52 Lonicera japonica HOM05D005031 ORTHO05D006098 2.7e-20 102.8 71 57.7
BcaB08g34788 Brassica carinata HOM05D005031 ORTHO05D006098 1.7e-19 100.1 127 48.0
MELO3C020438.2 Cucumis melo HOM05D005031 ORTHO05D006098 2.1e-17 93.2 55 74.5
MELO3C010414.2 Cucumis melo HOM05D005031 ORTHO05D006098 8.0e-17 91.3 53 75.5
CARHR238390 Cardamine hirsuta HOM05D005031 ORTHO05D006098 1.4e-16 90.5 96 40.6
Cre02.g096850 Chlamydomonas reinhardtii HOM05D005031 ORTHO05D006098 1.2e-15 87.4 135 38.5
MELO3C032992.2 Cucumis melo HOM05D005031 ORTHO05D006098 5.8e-15 85.1 48 77.1
Rhsim03G0261000 Rhododendron simsii HOM05D005031 ORTHO05D006098 1.7e-14 83.6 80 56.2
MCO15G043 Micromonas commoda HOM05D005031 ORTHO05D006098 2.4e-13 79.7 133 36.8
PRCOL_00004780 Prasinoderma coloniale HOM05D005031 ORTHO05D006098 9.2e-13 77.8 147 31.3
MELO3C033057.2 Cucumis melo HOM05D005031 ORTHO05D006098 6.0e-12 75.1 38 81.6


User provided reference genes

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