Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g12900 Coffea canephora HOM05D007669 ORTHO05D009624 0.0e+00 1570.8 782 100.0
Dinv25484 Davidia involucrata HOM05D007669 ORTHO05D009624 2.0e-216 756.5 762 54.7
Oeu025206.1 Olea europaea HOM05D007669 ORTHO05D009624 1.5e-211 740.3 695 54.2
Migut.K00227 Erythranthe guttata HOM05D007669 ORTHO05D009624 4.2e-198 695.7 779 49.4
Cfa013482 Carpinus fangiana HOM05D007669 ORTHO05D009624 1.3e-194 684.1 794 47.6
SalBow1G4073 Salvia bowleyana HOM05D007669 ORTHO05D009624 4.9e-191 672.2 788 47.8
GSVIVG01029262001 Vitis vinifera HOM05D007669 ORTHO05D009624 4.2e-190 669.1 789 48.7
Rhsim01G0007900 Rhododendron simsii HOM05D007669 ORTHO05D009624 3.3e-187 659.4 817 46.5
Ciclev10007518m.g Citrus clementina HOM05D007669 ORTHO05D009624 1.1e-182 644.4 760 49.6
HanXRQChr09g0244441 Helianthus annuus HOM05D007669 ORTHO05D009624 1.1e-182 644.4 763 47.4
Potri.018G133300 Populus trichocarpa HOM05D007669 ORTHO05D009624 4.6e-181 639.0 748 47.3
Sabra18G0113000 Salix brachista HOM05D007669 ORTHO05D009624 7.9e-181 638.3 736 47.0
Manes.14G174400 Manihot esculenta HOM05D007669 ORTHO05D009624 4.3e-179 632.5 793 45.8
TWI34G1867 Tripterygium wilfordii HOM05D007669 ORTHO05D009624 3.7e-178 629.4 782 45.7
arahy.Tifrunner.gnm1.ann1.BQQL35 Arachis hypogaea HOM05D007669 ORTHO05D009624 1.2e-173 614.4 761 44.9
arahy.Tifrunner.gnm1.ann1.YI9GDS Arachis hypogaea HOM05D007669 ORTHO05D009624 1.6e-173 614.0 757 45.3
MD13G1236300 Malus domestica HOM05D007669 ORTHO05D009624 8.8e-172 608.2 763 45.6
Lsat_1_v5_gn_7_54021 Lactuca sativa HOM05D007669 ORTHO05D009624 1.5e-171 607.4 744 45.2
QL11p009976 Quercus lobata HOM05D007669 ORTHO05D009624 1.7e-170 604.0 915 42.2
Phvul.003G138500 Phaseolus vulgaris HOM05D007669 ORTHO05D009624 5.3e-169 599.0 784 44.4
RcHm_v2.0_Chr4g0398451 Rosa chinensis HOM05D007669 ORTHO05D009624 5.3e-169 599.0 779 43.5
PGR044G0001 Punica granatum HOM05D007669 ORTHO05D009624 2.6e-168 596.7 771 44.2
CANSAT11G2077 Cannabis sativa HOM05D007669 ORTHO05D009624 2.2e-167 593.6 812 45.4
Lalb_Chr07g0180781 Lupinus albus HOM05D007669 ORTHO05D009624 5.0e-167 592.4 788 42.8
TPR.G5403 Trifolium pratense HOM05D007669 ORTHO05D009624 6.5e-167 592.0 761 44.3
FAN17G0559 Fragaria x ananassa HOM05D007669 ORTHO05D009624 8.5e-167 591.7 756 43.1
SGA_v2.0_scaffold17G07944 Striga asiatica HOM05D007669 ORTHO05D009624 3.2e-166 589.7 786 45.0
Gorai.009G262500 Gossypium raimondii HOM05D007669 ORTHO05D009624 9.4e-166 588.2 740 44.7
Lj4g0015120 Lotus japonicus HOM05D007669 ORTHO05D009624 1.2e-165 587.8 747 44.8
Gohir.D05G246300 Gossypium hirsutum HOM05D007669 ORTHO05D009624 2.7e-165 586.6 740 44.7
FAN07G2841 Fragaria x ananassa HOM05D007669 ORTHO05D009624 6.1e-165 585.5 756 42.5
ClCG06G013870 Citrullus lanatus HOM05D007669 ORTHO05D009624 8.0e-165 585.1 762 45.3
Gohir.A05G248100 Gossypium hirsutum HOM05D007669 ORTHO05D009624 2.6e-163 580.1 739 44.7
Ah.09g232160 Amaranthus hybridus HOM05D007669 ORTHO05D009624 2.6e-160 570.1 768 43.5
Nn8g40420 Nelumbo nucifera HOM05D007669 ORTHO05D009624 1.3e-159 567.8 788 44.5
Medtr4g126780 Medicago truncatula HOM05D007669 ORTHO05D009624 3.8e-159 566.2 735 44.6
Duzib177G0349 Durio zibethinus HOM05D007669 ORTHO05D009624 3.2e-158 563.1 729 45.7
Sed0018351 Sechium edule HOM05D007669 ORTHO05D009624 2.7e-157 560.1 756 44.2
EL10Ac8g19326 Beta vulgaris HOM05D007669 ORTHO05D009624 6.1e-157 558.9 770 42.9
Ca_21270_v3 Cicer arietinum L. HOM05D007669 ORTHO05D009624 5.2e-156 555.8 853 38.9
Prupe.1G068100 Prunus persica HOM05D007669 ORTHO05D009624 4.4e-155 552.7 613 48.5
Hund06703 Selenicereus undatus HOM05D007669 ORTHO05D009624 3.7e-154 549.7 821 40.7
vmacro13101 Vaccinium macrocarpon HOM05D007669 ORTHO05D009624 1.9e-150 537.3 853 41.0
Lj2g0020468 Lotus japonicus HOM05D007669 ORTHO05D009624 2.5e-150 537.0 762 42.3
PSO170G1866 Papaver somniferum HOM05D007669 ORTHO05D009624 2.2e-146 523.9 783 42.0
FAN22G2123 Fragaria x ananassa HOM05D007669 ORTHO05D009624 8.3e-146 521.9 594 44.6
AUR62031310 Chenopodium quinoa HOM05D007669 ORTHO05D009624 3.1e-145 520.0 781 41.4
Aqoxy7G02932 Aquilegia oxysepala HOM05D007669 ORTHO05D009624 2.7e-144 516.9 781 41.5
PSO063G2993 Papaver somniferum HOM05D007669 ORTHO05D009624 1.3e-143 514.6 781 41.9
ECA240G0205 Erigeron canadensis HOM05D007669 ORTHO05D009624 2.3e-143 513.8 679 43.2
Cpa.g.sc115.51 Carica papaya HOM05D007669 ORTHO05D009624 3.8e-143 513.1 717 44.1
CiPaw.08G030700 Carya illinoinensis HOM05D007669 ORTHO05D009624 2.5e-142 510.4 569 49.6
Sc13g0008100 Simmondsia chinensis HOM05D007669 ORTHO05D009624 1.4e-137 494.6 760 40.3
VMungo1215G2771 Vigna mungo HOM05D007669 ORTHO05D009624 2.3e-135 487.3 949 34.6
ATR0580G240 Amborella trichopoda HOM05D007669 ORTHO05D009624 7.3e-134 482.3 799 38.8
FvH4_4g06530 Fragaria vesca HOM05D007669 ORTHO05D009624 2.8e-133 480.3 520 47.5
MELO3C017409.2 Cucumis melo HOM05D007669 ORTHO05D009624 5.8e-131 472.6 731 41.5
Eucgr.D01099 Eucalyptus grandis HOM05D007669 ORTHO05D009624 4.7e-125 453.0 526 47.9
Glyma.17G056500 Glycine max HOM05D007669 ORTHO05D009624 2.2e-122 444.1 589 43.8
Hma1.2p1_0726F.1_g208990 Hydrangea macrophylla HOM05D007669 ORTHO05D009624 6.4e-122 442.6 550 46.0
Psat4g013920 Pisum sativum HOM05D007669 ORTHO05D009624 2.1e-120 437.6 558 45.2
Zm00001eb432590 Zea mays HOM05D007669 ORTHO05D009624 2.6e-107 394.0 756 36.1
MBI16_g09333_MAGBIO Magnolia biondii HOM05D007669 ORTHO05D009624 3.4e-107 393.7 509 46.0
DCAR_017992 Daucus carota HOM05D007669 ORTHO05D009624 2.5e-102 377.5 507 43.2
HPP92_010780 Vanilla planifolia HOM05D007669 ORTHO05D009624 1.4e-100 371.7 493 42.6
Eucgr.D01111 Eucalyptus grandis HOM05D007669 ORTHO05D009624 5.3e-100 369.8 709 35.8
AUR62027394 Chenopodium quinoa HOM05D007669 ORTHO05D009624 1.3e-93 348.6 428 44.2
Eucgr.L01386 Eucalyptus grandis HOM05D007669 ORTHO05D009624 4.9e-90 336.7 402 48.0
CsaV3_1G032070 Cucumis sativus L. HOM05D007669 ORTHO05D009624 6.4e-90 336.3 398 48.0
Glyma.13G102601 Glycine max HOM05D007669 ORTHO05D009624 1.4e-81 308.5 453 42.2
SEGI_13081 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 2.4e-76 291.2 594 33.0
CDE02G1706 Ceratophyllum demersum HOM05D007669 ORTHO05D009624 7.9e-72 276.2 475 36.6
AagrBONN_evm.TU.Sc2ySwM_117.3295 Anthoceros agrestis HOM05D007669 ORTHO05D009624 3.1e-68 264.2 788 27.5
Pp3c9_5530 Physcomitrium patens HOM05D007669 ORTHO05D009624 1.3e-66 258.8 766 29.1
Mapoly0147s0035 Marchantia polymorpha HOM05D007669 ORTHO05D009624 1.2e-59 235.7 863 26.2
FAN12G2799 Fragaria x ananassa HOM05D007669 ORTHO05D009624 2.2e-58 231.5 247 47.0
SEGI_05703 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 4.7e-56 223.8 392 35.5
SMO356G0293 Selaginella moellendorffii HOM05D007669 ORTHO05D009624 1.4e-55 222.2 476 33.2
Haze_22064 Corylus avellana HOM05D007669 ORTHO05D009624 1.4e-44 185.7 203 47.8
DCAR_017991 Daucus carota HOM05D007669 ORTHO05D009624 2.7e-40 171.4 199 44.7
Eucgr.D01101 Eucalyptus grandis HOM05D007669 ORTHO05D009624 1.4e-36 159.1 198 45.5
COL.COLO4_25058 Corchorus olitorius HOM05D007669 ORTHO05D009624 9.4e-33 146.4 163 45.4
Psat7g062600 Pisum sativum HOM05D007669 ORTHO05D009624 1.8e-31 142.1 141 48.9
Glyma.13G102550 Glycine max HOM05D007669 ORTHO05D009624 4.1e-28 131.0 281 33.5
Haze_22063 Corylus avellana HOM05D007669 ORTHO05D009624 7.5e-22 110.2 154 45.5
Lj3A156T43 Lonicera japonica HOM05D007669 ORTHO05D009624 3.9e-18 97.8 146 45.9
COL.COLO4_25059 Corchorus olitorius HOM05D007669 ORTHO05D009624 1.5e-14 85.9 174 37.9
Cre07.g356600 Chlamydomonas reinhardtii HOM05D007669 ORTHO05D009624 2.2e-13 82.0 279 27.2
PRCOL_00006584 Prasinoderma coloniale HOM05D024043 ORTHO05D009624 4.9e-13 80.9 144 37.5
PRCOL_00001814 Prasinoderma coloniale HOM05D007669 ORTHO05D009624 1.4e-12 79.3 144 37.5
SEGI_25409 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 1.2e-11 76.3 184 30.4
Mapoly0004s0046 Marchantia polymorpha HOM05D024043 ORTHO05D031244 3.5e-11 74.7 128 39.1
Psat4g139360 Pisum sativum HOM05D007669 ORTHO05D009624 6.0e-11 73.9 85 44.7
MCO10G383 Micromonas commoda HOM05D024043 ORTHO05D009624 7.8e-11 73.6 120 40.0
Pp3c25_1540 Physcomitrium patens HOM05D024043 ORTHO05D031244 3.9e-10 71.2 161 31.7
AagrBONN_evm.TU.Sc2ySwM_369.230 Anthoceros agrestis HOM05D024043 ORTHO05D031244 3.3e-09 68.2 112 36.6
Os04g0659150 Oryza sativa ssp. japonica HOM05D007669 ORTHO05D009624 2.6e-06 58.5 138 32.6
CiPaw.08G030600 Carya illinoinensis HOM05D007669 ORTHO05D009624 4.4e-06 57.8 51 51.0


User provided reference genes

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