Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g11350 Coffea canephora HOM05D006771 ORTHO05D008296 1.8e-105 386.0 201 100.0
Dinv36762 Davidia involucrata HOM05D006771 ORTHO05D008296 2.0e-35 153.3 187 49.7
Peaxi162Scf01121g00112 Petunia axillaris HOM05D006771 ORTHO05D008296 5.4e-25 118.6 198 38.9
CAN.G235.1 Capsicum annuum HOM05D006771 ORTHO05D008296 2.7e-24 116.3 160 44.4
Migut.L01489 Erythranthe guttata HOM05D006771 ORTHO05D008296 7.8e-24 114.8 160 46.2
SalBow1G1031 Salvia bowleyana HOM05D006771 ORTHO05D008296 7.8e-24 114.8 195 40.0
PGSC0003DMG401013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 7.3e-22 108.2 193 39.4
Nitab4.5_0005634g0020 Nicotiana tabacum HOM05D006771 ORTHO05D008296 2.4e-20 103.2 202 35.6
Solyc07g039190.4 Solanum lycopersicum HOM05D006771 ORTHO05D008296 5.8e-19 98.6 203 36.5
Sopen07g017540 Solanum pennellii HOM05D006771 ORTHO05D008296 7.6e-19 98.2 202 35.1
QL02p062800 Quercus lobata HOM05D006771 ORTHO05D008296 9.9e-19 97.8 132 43.2
Nitab4.5_0005033g0010 Nicotiana tabacum HOM05D006771 ORTHO05D008296 1.3e-18 97.4 203 34.5
Eucgr.C03649 Eucalyptus grandis HOM05D006771 ORTHO05D008296 1.7e-18 97.1 166 39.2
TAR624G0646 Trochodendron aralioides HOM05D006771 ORTHO05D008296 6.4e-18 95.1 151 41.7
Eucgr.C03893 Eucalyptus grandis HOM05D006771 ORTHO05D008296 9.3e-17 91.3 164 38.4
Lj4A308T27 Lonicera japonica HOM05D006771 ORTHO05D008296 9.3e-17 91.3 83 59.0
CSS0032707 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 3.5e-16 89.4 173 38.7
CiPaw.03G216900 Carya illinoinensis HOM05D006771 ORTHO05D008296 6.6e-15 85.1 163 36.2
DCAR_031968 Daucus carota HOM05D006771 ORTHO05D008296 3.3e-14 82.8 157 37.6
Oeu042645.4 Olea europaea HOM05D006771 ORTHO05D008296 7.3e-14 81.6 140 42.9
CANSAT56G0603 Cannabis sativa HOM05D006771 ORTHO05D008296 1.3e-13 80.9 108 38.9
RcHm_v2.0_Chr2g0093251 Rosa chinensis HOM05D006771 ORTHO05D008296 2.1e-13 80.1 129 38.8
unitig_699.g19301 Utricularia gibba HOM05D006771 ORTHO05D008296 2.8e-13 79.7 137 38.7
MD15G1206500 Malus domestica HOM05D006771 ORTHO05D008296 6.2e-13 78.6 111 40.5
Manes.03G033100 Manihot esculenta HOM05D006771 ORTHO05D008296 1.4e-12 77.4 121 41.3
Prupe.7G210300 Prunus persica HOM05D006771 ORTHO05D008296 3.1e-12 76.3 123 36.6
FvH4_1g07370 Fragaria vesca HOM05D006771 ORTHO05D008296 9.0e-12 74.7 154 35.1
vmacro06287 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 1.2e-11 74.3 135 34.8
vmacro23430 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 1.2e-11 74.3 135 34.8
FAN19G1581 Fragaria x ananassa HOM05D006771 ORTHO05D008296 2.0e-11 73.6 148 35.8
FAN23G2606 Fragaria x ananassa HOM05D006771 ORTHO05D008296 2.6e-11 73.2 148 34.5
FAN26G3254 Fragaria x ananassa HOM05D006771 ORTHO05D008296 2.6e-11 73.2 147 33.3
FAN28G0978 Fragaria x ananassa HOM05D006771 ORTHO05D008296 2.6e-11 73.2 148 34.5
PGR102G2735 Punica granatum HOM05D006771 ORTHO05D008296 7.6e-11 71.6 121 39.7
Potri.006G151100 Populus trichocarpa HOM05D006771 ORTHO05D008296 9.9e-11 71.2 162 35.8
FAN26G2123 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.3e-10 70.9 147 33.3
Cpa.g.sc93.24 Carica papaya HOM05D006771 ORTHO05D008296 4.9e-10 68.9 165 30.3
ClCG11G001770 Citrullus lanatus HOM05D006771 ORTHO05D008296 6.4e-10 68.6 187 32.1
MELO3C004623.2 Cucumis melo HOM05D006771 ORTHO05D008296 1.1e-09 67.8 125 33.6
GSVIVG01015209001 Vitis vinifera HOM05D006771 ORTHO05D008296 2.4e-09 66.6 124 37.1
PGSC0003DMG402013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 5.4e-09 65.5 78 47.4
Thecc.09G090100 Theobroma cacao HOM05D006771 ORTHO05D008296 5.4e-09 65.5 175 33.7
Sed0013958 Sechium edule HOM05D006771 ORTHO05D008296 1.2e-08 64.3 134 29.9
CsaV3_2G001480 Cucumis sativus L. HOM05D006771 ORTHO05D008296 2.1e-08 63.5 119 32.8
HanXRQChr12g0354831 Helianthus annuus HOM05D006771 ORTHO05D008296 4.6e-08 62.4 140 30.0
Nn8g38880 Nelumbo nucifera HOM05D006771 ORTHO05D008296 6.0e-08 62.0 151 34.4
Duzib187G1830 Durio zibethinus HOM05D006771 ORTHO05D008296 7.9e-08 61.6 173 31.2
Gorai.010G082600 Gossypium raimondii HOM05D006771 ORTHO05D008296 1.3e-07 60.8 165 33.9
SGA_v2.0_scaffold21G09363 Striga asiatica HOM05D006771 ORTHO05D008296 1.3e-07 60.8 161 31.7
PSO832G0455 Papaver somniferum HOM05D006771 ORTHO05D008296 2.3e-07 60.1 111 38.7
Gohir.D06G070900 Gossypium hirsutum HOM05D006771 ORTHO05D008296 5.1e-07 58.9 165 33.3
Aqoxy7G01223_Aqoxy7G01224 Aquilegia oxysepala HOM05D006771 ORTHO05D008296 1.1e-06 57.8 157 31.2
Gohir.A06G072300 Gossypium hirsutum HOM05D006771 ORTHO05D008296 2.5e-06 56.6 167 31.7
COL.COLO4_18206 Corchorus olitorius HOM05D006771 ORTHO05D008296 3.3e-06 56.2 169 29.6
PSO063G0725 Papaver somniferum HOM05D006771 ORTHO05D008296 3.3e-06 56.2 110 36.4
Lsat_1_v5_gn_5_142241 Lactuca sativa HOM05D006771 ORTHO05D008296 5.6e-06 55.5 111 39.6


User provided reference genes

Program Settings