Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g10880 Coffea canephora HOM05D001384 ORTHO05D001215 7.5e-21 103.2 64 100.0
HanXRQChr10g0319041 Helianthus annuus HOM05D001384 ORTHO05D001215 2.0e-10 68.6 64 60.9
Nitab4.5_0000540g0040 Nicotiana tabacum HOM05D001384 ORTHO05D001215 5.0e-09 63.9 64 60.9
Thecc.09G095500 Theobroma cacao HOM05D001384 ORTHO05D001215 5.0e-09 63.9 65 63.1
Peaxi162Scf00498g00030 Petunia axillaris HOM05D001384 ORTHO05D001215 6.6e-09 63.5 64 59.4
HanXRQChr12g0355291 Helianthus annuus HOM05D001384 ORTHO05D001215 1.9e-08 62.0 64 64.1
Migut.J01071 Erythranthe guttata HOM05D001384 ORTHO05D001215 7.3e-08 60.1 64 56.2
Prupe.7G215700 Prunus persica HOM05D001384 ORTHO05D001215 9.5e-08 59.7 65 61.5
DCAR_010686 Daucus carota HOM05D001384 ORTHO05D001215 1.6e-07 58.9 64 64.1
Lj2g0025499 Lotus japonicus HOM05D001384 ORTHO05D001215 1.6e-07 58.9 65 61.5
Sopen08g030260 Solanum pennellii HOM05D001384 ORTHO05D001215 1.6e-07 58.9 54 57.4
PGSC0003DMG400012165 Solanum tuberosum HOM05D001384 ORTHO05D001215 2.1e-07 58.5 54 57.4
MD02G1072000 Malus domestica HOM05D001384 ORTHO05D001215 2.8e-07 58.2 65 61.5
Solyc08g081970.3 Solanum lycopersicum HOM05D001384 ORTHO05D001215 2.8e-07 58.2 54 57.4
CAN.G532.91 Capsicum annuum HOM05D001384 ORTHO05D001215 4.7e-07 57.4 51 58.8
Duzib068G0580 Durio zibethinus HOM05D001384 ORTHO05D001215 4.7e-07 57.4 64 53.1
Glyma.01G004600 Glycine max HOM05D001384 ORTHO05D001215 4.7e-07 57.4 66 60.6
CSS0002673 Camellia sinensis var. sinensis HOM05D001384 ORTHO05D001215 1.1e-06 56.2 68 64.7
CSS0049312 Camellia sinensis var. sinensis HOM05D001384 ORTHO05D001215 1.1e-06 56.2 68 64.7
Lsat_1_v5_gn_7_38720 Lactuca sativa HOM05D001384 ORTHO05D001215 1.1e-06 56.2 64 51.6
TAR626G0551 Trochodendron aralioides HOM05D001384 ORTHO05D001215 1.1e-06 56.2 65 52.3
DCAR_012014 Daucus carota HOM05D001384 ORTHO05D001215 1.4e-06 55.8 64 60.9
Gohir.A12G234600 Gossypium hirsutum HOM05D001384 ORTHO05D001215 1.4e-06 55.8 64 53.1
RcHm_v2.0_Chr2g0092451 Rosa chinensis HOM05D001384 ORTHO05D001215 1.4e-06 55.8 66 57.6
arahy.Tifrunner.gnm1.ann1.3Z4R3A Arachis hypogaea HOM05D001384 ORTHO05D001215 1.8e-06 55.5 65 55.4
arahy.Tifrunner.gnm1.ann1.TI6HCL Arachis hypogaea HOM05D001384 ORTHO05D001215 1.8e-06 55.5 65 55.4
Carub.0006s2183 Capsella rubella HOM05D001384 ORTHO05D001215 1.8e-06 55.5 65 53.8
Psat1g048920 Pisum sativum HOM05D001384 ORTHO05D001215 1.8e-06 55.5 65 60.0
arahy.Tifrunner.gnm1.ann1.T3QZI5 Arachis hypogaea HOM05D001384 ORTHO05D001215 2.3e-06 55.1 49 67.3
FvH4_1g06710 Fragaria vesca HOM05D001384 ORTHO05D001215 2.3e-06 55.1 66 57.6
TAR375G0324 Trochodendron aralioides HOM05D001384 ORTHO05D001215 2.3e-06 55.1 55 54.5
GSVIVG01015262001 Vitis vinifera HOM05D001384 ORTHO05D001215 2.3e-06 55.1 66 65.2
Duzib084G1120 Durio zibethinus HOM05D001384 ORTHO05D001215 3.1e-06 54.7 57 56.1
Migut.K00567 Erythranthe guttata HOM05D001384 ORTHO05D001215 3.1e-06 54.7 64 54.7
FAN06G2829 Fragaria x ananassa HOM05D001384 ORTHO05D001215 3.1e-06 54.7 57 50.9
MD15G1201800 Malus domestica HOM05D001384 ORTHO05D001215 3.1e-06 54.7 65 58.5
COL.COLO4_21727 Corchorus olitorius HOM05D001384 ORTHO05D001215 4.0e-06 54.3 64 59.4
Gohir.D12G235700 Gossypium hirsutum HOM05D001384 ORTHO05D001215 4.0e-06 54.3 64 51.6
Gorai.008G252400 Gossypium raimondii HOM05D001384 ORTHO05D001215 4.0e-06 54.3 64 51.6
HanXRQChr09g0238501 Helianthus annuus HOM05D001384 ORTHO05D001215 4.0e-06 54.3 64 50.0
Manes.06G156900 Manihot esculenta HOM05D001384 ORTHO05D001215 4.0e-06 54.3 56 53.6
Sed0001168 Sechium edule HOM05D001384 ORTHO05D001215 4.0e-06 54.3 50 70.0
Thecc.03G292300 Theobroma cacao HOM05D001384 ORTHO05D001215 4.0e-06 54.3 64 50.0
TWI39G0811 Tripterygium wilfordii HOM05D001384 ORTHO05D001215 4.0e-06 54.3 65 56.9
arahy.Tifrunner.gnm1.ann1.Y9NP63 Arachis hypogaea HOM05D001384 ORTHO05D001215 5.2e-06 53.9 55 61.8
Duzib205G1079 Durio zibethinus HOM05D001384 ORTHO05D001215 5.2e-06 53.9 64 50.0
Glyma.07G127200 Glycine max HOM05D001384 ORTHO05D001215 5.2e-06 53.9 65 53.8
Nitab4.5_0004161g0070 Nicotiana tabacum HOM05D001384 ORTHO05D001215 5.2e-06 53.9 50 54.0
TAR636G2986 Trochodendron aralioides HOM05D001384 ORTHO05D001215 5.2e-06 53.9 55 63.6
CSS0028432 Camellia sinensis var. sinensis HOM05D001384 ORTHO05D001215 6.8e-06 53.5 67 62.7
Glyma.11G018900 Glycine max HOM05D001384 ORTHO05D001215 6.8e-06 53.5 53 54.7
Nitab4.5_0000223g0120 Nicotiana tabacum HOM05D001384 ORTHO05D001215 6.8e-06 53.5 50 52.0
COL.COLO4_18260 Corchorus olitorius HOM05D001384 ORTHO05D001215 8.9e-06 53.1 56 57.1
Lj4g0006841 Lotus japonicus HOM05D001384 ORTHO05D001215 8.9e-06 53.1 55 60.0
RcHm_v2.0_Chr1g0380071 Rosa chinensis HOM05D001384 ORTHO05D001215 8.9e-06 53.1 55 50.9


User provided reference genes

Program Settings