Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g10300 Coffea canephora HOM05D004175 ORTHO05D004664 1.8e-139 499.6 324 100.0
Medtr8g102770 Medicago truncatula HOM05D004175 ORTHO05D004664 3.1e-99 365.9 315 73.3
VMungo0251G2778 Vigna mungo HOM05D004175 ORTHO05D004664 2.7e-98 362.8 312 73.7
AUR62010918 Chenopodium quinoa HOM05D004175 ORTHO05D004664 3.5e-98 362.5 303 81.5
Hund09241 Selenicereus undatus HOM05D004175 ORTHO05D004664 2.3e-97 359.8 314 71.3
Prupe.7G222100 Prunus persica HOM05D004175 ORTHO05D004664 1.4e-94 350.5 323 74.3
Oeu000358.1 Olea europaea HOM05D004175 ORTHO05D004664 1.8e-94 350.1 313 78.0
Lj3g0019618 Lotus japonicus HOM05D004175 ORTHO05D004664 4.0e-94 349.0 312 74.4
CAN.G274.4 Capsicum annuum HOM05D004175 ORTHO05D004664 2.0e-93 346.7 314 71.0
Dinv36699 Davidia involucrata HOM05D004175 ORTHO05D004664 7.5e-93 344.7 318 76.4
Peaxi162Scf00001g00131 Petunia axillaris HOM05D004175 ORTHO05D004664 7.5e-93 344.7 314 74.2
Thhalv10014089m.g Eutrema salsugineum HOM05D004175 ORTHO05D004664 9.8e-93 344.4 323 73.4
AT5G19680 Arabidopsis thaliana HOM05D004175 ORTHO05D004664 2.8e-92 342.8 323 74.0
DCAR_012049 Daucus carota HOM05D004175 ORTHO05D004664 2.8e-92 342.8 318 75.5
Carub.0006s1803 Capsella rubella HOM05D004175 ORTHO05D004664 2.4e-91 339.7 323 74.0
Lsat_1_v5_gn_5_143861 Lactuca sativa HOM05D004175 ORTHO05D004664 2.4e-91 339.7 312 75.0
BNapus_Darmor_BZH_scaffold_38p02220 Brassica napus HOM05D004175 ORTHO05D004664 7.0e-91 338.2 311 75.9
Sopen05g014800 Solanum pennellii HOM05D004175 ORTHO05D004664 1.2e-90 337.4 315 71.1
BolC9t58515H Brassica oleracea HOM05D004175 ORTHO05D004664 1.6e-90 337.0 323 73.1
Solyc05g018150.3 Solanum lycopersicum HOM05D004175 ORTHO05D004664 2.0e-90 336.7 315 71.1
Atru.chr7.1440 Acer truncatum HOM05D004175 ORTHO05D004664 3.5e-90 335.9 309 76.7
BraA10t44078Z Brassica rapa HOM05D004175 ORTHO05D004664 3.5e-90 335.9 323 73.1
A10p20040 Brassica napus HOM05D004175 ORTHO05D004664 7.8e-90 334.7 323 73.1
AL6G31190 Arabidopsis lyrata HOM05D004175 ORTHO05D004664 5.0e-89 332.0 323 72.1
BcaB05g23410 Brassica carinata HOM05D004175 ORTHO05D004664 5.0e-89 332.0 321 73.5
Aqoxy7G03896 Aquilegia oxysepala HOM05D004175 ORTHO05D004664 1.9e-88 330.1 312 73.4
CAN.G525.1 Capsicum annuum HOM05D004175 ORTHO05D004664 2.5e-88 329.7 314 74.8
HanXRQChr10g0318361 Helianthus annuus HOM05D004175 ORTHO05D004664 2.5e-88 329.7 312 74.4
SGA_v2.0_scaffold10G05161 Striga asiatica HOM05D004175 ORTHO05D004664 2.5e-88 329.7 310 75.8
BcaC04g19365 Brassica carinata HOM05D004175 ORTHO05D004664 9.5e-88 327.8 323 72.1
C09p56500 Brassica napus HOM05D004175 ORTHO05D004664 9.5e-88 327.8 323 72.1
CARHR193230 Cardamine hirsuta HOM05D004175 ORTHO05D004664 3.6e-87 325.9 323 71.8
Haze_25808 Corylus avellana HOM05D004175 ORTHO05D004664 8.0e-87 324.7 323 66.9
Phvul.002G310000 Phaseolus vulgaris HOM05D004175 ORTHO05D004664 1.0e-86 324.3 312 68.6
Ca_17354_v3 Cicer arietinum L. HOM05D004175 ORTHO05D004664 1.8e-86 323.6 309 69.6
Ca_29618_v3 Cicer arietinum L. HOM05D004175 ORTHO05D004664 1.8e-86 323.6 309 69.6
SGA_v2.0_scaffold62G21556 Striga asiatica HOM05D004175 ORTHO05D004664 1.8e-86 323.6 323 68.1
CSS0007429 Camellia sinensis var. sinensis HOM05D004175 ORTHO05D004664 3.1e-86 322.8 318 67.0
CSS0045871 Camellia sinensis var. sinensis HOM05D004175 ORTHO05D004664 3.1e-86 322.8 318 67.0
MD02G1060900 Malus domestica HOM05D004175 ORTHO05D004664 8.9e-86 321.2 323 68.7
TWI32G1108 Tripterygium wilfordii HOM05D004175 ORTHO05D004664 1.5e-85 320.5 325 72.0
CANSAT56G2035 Cannabis sativa HOM05D004175 ORTHO05D004664 4.4e-85 318.9 311 67.8
FvH4_1g05880 Fragaria vesca HOM05D004175 ORTHO05D004664 4.4e-85 318.9 318 73.6
Lalb_Chr05g0223141 Lupinus albus HOM05D004175 ORTHO05D004664 4.4e-85 318.9 312 67.6
FAN23G2598 Fragaria x ananassa HOM05D004175 ORTHO05D004664 7.5e-85 318.2 318 73.6
FAN26G0873 Fragaria x ananassa HOM05D004175 ORTHO05D004664 7.5e-85 318.2 318 73.3
FAN26G2762 Fragaria x ananassa HOM05D004175 ORTHO05D004664 7.5e-85 318.2 318 73.3
Oeu017825.1 Olea europaea HOM05D004175 ORTHO05D004664 7.5e-85 318.2 318 73.0
Glyma.08G034700 Glycine max HOM05D004175 ORTHO05D004664 1.3e-84 317.4 312 67.6
Ah.14g083210 Amaranthus hybridus HOM05D004175 ORTHO05D004664 2.2e-84 316.6 320 71.9
FAN28G2614 Fragaria x ananassa HOM05D004175 ORTHO05D004664 2.2e-84 316.6 318 72.6
Ciclev10008855m.g Citrus clementina HOM05D004175 ORTHO05D004664 2.9e-84 316.2 310 67.7
CiPaw.03G226400 Carya illinoinensis HOM05D004175 ORTHO05D004664 3.7e-84 315.8 312 73.7
vmacro10860 Vaccinium macrocarpon HOM05D004175 ORTHO05D004664 1.9e-83 313.5 309 74.4
Migut.J01107 Erythranthe guttata HOM05D004175 ORTHO05D004664 5.4e-83 312.0 321 71.7
Gohir.A13G195800 Gossypium hirsutum HOM05D004175 ORTHO05D004664 7.0e-83 311.6 312 73.1
Sp6g24700 Schrenkiella parvula HOM05D004175 ORTHO05D004664 2.7e-82 309.7 323 70.6
GSVIVG01015319001 Vitis vinifera HOM05D004175 ORTHO05D004664 2.7e-82 309.7 313 74.1
Gohir.A06G066500 Gossypium hirsutum HOM05D004175 ORTHO05D004664 3.5e-82 309.3 312 70.8
Gohir.D13G201000 Gossypium hirsutum HOM05D004175 ORTHO05D004664 1.7e-81 307.0 312 72.4
CsaV3_2G001990 Cucumis sativus L. HOM05D004175 ORTHO05D004664 2.3e-81 306.6 323 70.6
TAR383G0226 Trochodendron aralioides HOM05D004175 ORTHO05D004664 2.3e-81 306.6 319 64.3
MSTRG.6019 Avicennia marina HOM05D004175 ORTHO05D004664 3.0e-81 306.2 313 72.2
Nn2g11614 Nelumbo nucifera HOM05D004175 ORTHO05D004664 3.0e-81 306.2 308 74.4
Thecc.09G102700 Theobroma cacao HOM05D004175 ORTHO05D004664 3.9e-81 305.8 310 72.9
Actinidia09442 Actinidia chinensis HOM05D001936 ORTHO05D002296 5.0e-81 305.4 314 72.9
arahy.Tifrunner.gnm1.ann1.2Q2DTK Arachis hypogaea HOM05D004175 ORTHO05D004664 8.6e-81 304.7 327 66.4
Gohir.D06G065000 Gossypium hirsutum HOM05D004175 ORTHO05D004664 1.5e-80 303.9 312 67.9
arahy.Tifrunner.gnm1.ann1.5M1SBB Arachis hypogaea HOM05D004175 ORTHO05D004664 3.3e-80 302.8 327 67.0
PSO210G6864 Papaver somniferum HOM05D004175 ORTHO05D004664 3.3e-80 302.8 323 62.5
MELO3C004581.2 Cucumis melo HOM05D004175 ORTHO05D004664 4.3e-80 302.4 323 70.0
MD15G1194400 Malus domestica HOM05D004175 ORTHO05D004664 4.3e-80 302.4 323 66.6
BcaC03g13699 Brassica carinata HOM05D004175 ORTHO05D004664 9.5e-80 301.2 311 71.7
ECA247G2452 Erigeron canadensis HOM05D004175 ORTHO05D004664 9.5e-80 301.2 288 76.7
Glyma.05G227700 Glycine max HOM05D004175 ORTHO05D004664 9.5e-80 301.2 322 63.7
BcaC04g19363 Brassica carinata HOM05D004175 ORTHO05D004664 2.8e-79 299.7 296 73.3
Duzib187G1630 Durio zibethinus HOM05D004175 ORTHO05D004664 2.8e-79 299.7 312 71.2
ATR0705G211 Amborella trichopoda HOM05D004175 ORTHO05D004664 3.6e-79 299.3 318 70.1
Sed0003540 Sechium edule HOM05D004175 ORTHO05D004664 3.6e-79 299.3 321 69.8
Aa31LG1G8760 Aethionema arabicum HOM05D004175 ORTHO05D004664 4.7e-79 298.9 316 69.6
PSO210G7624 Papaver somniferum HOM05D004175 ORTHO05D004664 4.7e-79 298.9 323 65.6
Eucgr.C03782 Eucalyptus grandis HOM05D004175 ORTHO05D004664 6.2e-79 298.5 318 66.7
THA.LOC104811087 Tarenaya hassleriana HOM05D004175 ORTHO05D004664 6.2e-79 298.5 311 71.1
Cfa003199 Carpinus fangiana HOM05D004175 ORTHO05D004664 8.0e-79 298.1 323 63.8
Manes.16G110500 Manihot esculenta HOM05D004175 ORTHO05D004664 8.0e-79 298.1 312 72.1
A02p05730 Brassica napus HOM05D004175 ORTHO05D004664 1.4e-78 297.4 311 70.7
BraA02t05525Z Brassica rapa HOM05D004175 ORTHO05D004664 1.4e-78 297.4 311 70.7
ClCG11G002240 Citrullus lanatus HOM05D004175 ORTHO05D004664 1.8e-78 297.0 353 53.0
ECA234G4006 Erigeron canadensis HOM05D004175 ORTHO05D004664 4.0e-78 295.8 310 70.3
QL02p042164 Quercus lobata HOM05D004175 ORTHO05D004664 8.9e-78 294.7 310 65.5
Sc08g0007900 Simmondsia chinensis HOM05D004175 ORTHO05D004664 5.8e-77 292.0 310 65.2
Hund26252 Selenicereus undatus HOM05D004175 ORTHO05D004664 3.7e-76 289.3 318 69.2
Cpa.g.sc40.51 Carica papaya HOM05D004175 ORTHO05D004664 4.9e-76 288.9 286 75.5
Nn8g39121 Nelumbo nucifera HOM05D004175 ORTHO05D004664 2.4e-75 286.6 283 75.6
BcaC04g19364 Brassica carinata HOM05D004175 ORTHO05D004664 5.4e-75 285.4 233 73.4
CDE02G1631 Ceratophyllum demersum HOM05D004175 ORTHO05D004664 2.1e-74 283.5 310 69.7
Psat7g016360 Pisum sativum HOM05D004175 ORTHO05D004664 2.1e-74 283.5 312 63.8
SHI11434 Sapria himalayana HOM05D004175 ORTHO05D004664 2.3e-73 280.0 348 56.0
Rhsim05G0041300 Rhododendron simsii HOM05D004175 ORTHO05D004664 3.0e-73 279.6 295 66.8
Gorai.010G076100 Gossypium raimondii HOM05D004175 ORTHO05D004664 3.9e-73 279.3 312 64.1
RcHm_v2.0_Chr2g0091541 Rosa chinensis HOM05D004175 ORTHO05D004664 6.6e-73 278.5 311 68.5
Zm00001eb204970 Zea mays HOM05D004175 ORTHO05D004664 6.6e-73 278.5 316 67.1
FAN19G1571 Fragaria x ananassa HOM05D004175 ORTHO05D004664 1.5e-72 277.3 318 61.9
Potri.006G163900 Populus trichocarpa HOM05D004175 ORTHO05D004664 1.5e-72 277.3 312 68.6
Gorai.013G229800 Gossypium raimondii HOM05D004175 ORTHO05D004664 4.3e-72 275.8 286 73.8
unitig_26.g8970 Utricularia gibba HOM05D004175 ORTHO05D004664 1.6e-71 273.9 322 62.1
RcHm_v2.0_Chr2g0091621 Rosa chinensis HOM05D004175 ORTHO05D004664 1.1e-70 271.2 291 72.9
TPR.G23501 Trifolium pratense HOM05D004175 ORTHO05D004664 1.5e-69 267.3 312 62.8
Sabra18G0074500 Salix brachista HOM05D004175 ORTHO05D004664 7.6e-69 265.0 285 73.3
BcaC01g02078 Brassica carinata HOM05D004175 ORTHO05D004664 1.3e-68 264.2 217 68.2
Os02g0230100 Oryza sativa ssp. japonica HOM05D004175 ORTHO05D004664 3.7e-68 262.7 310 66.5
Potri.018G086200 Populus trichocarpa HOM05D004175 ORTHO05D004664 4.9e-68 262.3 311 68.2
EL10Ac8g18403 Beta vulgaris HOM05D004175 ORTHO05D004664 7.1e-67 258.5 294 69.7
MBI04_g40471_MAGBIO Magnolia biondii HOM05D004175 ORTHO05D004664 1.6e-66 257.3 286 71.3
Duzib168G0201 Durio zibethinus HOM05D004175 ORTHO05D004664 7.3e-64 248.4 230 61.3
BolC2t08664H Brassica oleracea HOM05D004175 ORTHO05D004664 1.3e-60 237.7 216 61.6
C05p31230 Brassica napus HOM05D004175 ORTHO05D004664 1.7e-60 237.3 177 66.7
C03p72980 Brassica napus HOM05D004175 ORTHO05D004664 2.2e-60 236.9 177 66.7
Lalb_Chr09g0331471 Lupinus albus HOM05D004175 ORTHO05D004664 3.8e-60 236.1 297 62.3
SEGI_33191 Sequoiadendron giganteum HOM05D004175 ORTHO05D004664 4.2e-59 232.6 313 62.0
C02p31840 Brassica napus HOM05D004175 ORTHO05D004664 6.0e-58 228.8 218 67.9
Mapoly0051s0012 Marchantia polymorpha HOM05D004175 ORTHO05D004664 9.6e-56 221.5 317 58.4
C07p36980 Brassica napus HOM05D004175 ORTHO05D004664 1.1e-54 218.0 204 68.1
COL.COLO4_34774 Corchorus olitorius HOM05D004175 ORTHO05D004664 1.8e-54 217.2 151 74.8
BcaC03g15042 Brassica carinata HOM05D004175 ORTHO05D004664 3.1e-54 216.5 185 73.5
C09p49510 Brassica napus HOM05D004175 ORTHO05D004664 6.9e-54 215.3 204 68.1
C04p04320 Brassica napus HOM05D004175 ORTHO05D004664 2.9e-52 209.9 185 65.9
BcaC01g02978 Brassica carinata HOM05D004175 ORTHO05D004664 1.1e-51 208.0 218 58.7
C03p57560 Brassica napus HOM05D004175 ORTHO05D004664 3.5e-50 203.0 177 60.5
Pp3c1_38690 Physcomitrium patens HOM05D004175 ORTHO05D004664 2.3e-49 200.3 308 49.4
Lj7A662T62 Lonicera japonica HOM05D004175 ORTHO05D004664 8.7e-49 198.4 213 79.3
Nitab4.5_0000012g0030 Nicotiana tabacum HOM05D004175 ORTHO05D004664 1.5e-48 197.6 160 66.9
C01p01530 Brassica napus HOM05D004175 ORTHO05D004664 2.5e-48 196.8 151 67.5
AagrBONN_evm.TU.Sc2ySwM_117.1201 Anthoceros agrestis HOM05D004175 ORTHO05D004664 1.3e-47 194.5 322 50.6
BolC3t18031H Brassica oleracea HOM05D004175 ORTHO05D004664 2.8e-47 193.4 153 66.0
Pp3c2_9120 Physcomitrium patens HOM05D004175 ORTHO05D004664 2.8e-47 193.4 312 47.4
SMO337G0008 Selaginella moellendorffii HOM05D004175 ORTHO05D004664 4.0e-46 189.5 313 55.9
BcaC06g33783 Brassica carinata HOM05D004175 ORTHO05D004664 9.0e-46 188.3 186 66.7
BolC3t19136H Brassica oleracea HOM05D004175 ORTHO05D004664 5.8e-45 185.7 152 69.7
Nitab4.5_0003199g0020 Nicotiana tabacum HOM05D004175 ORTHO05D004664 7.6e-45 185.3 123 77.2
Gorai.001G184800 Gossypium raimondii HOM05D004175 ORTHO05D004664 2.9e-44 183.3 157 62.4
CBR_g36965 Chara braunii HOM05D004175 ORTHO05D004664 7.1e-43 178.7 316 51.3
BolC7t44210H Brassica oleracea HOM05D004175 ORTHO05D004664 2.6e-37 160.2 113 71.7
A07p01400 Brassica napus HOM05D004175 ORTHO05D004664 2.2e-36 157.1 176 52.8
MBI04_g06580_MAGBIO Magnolia biondii HOM05D004175 ORTHO05D004664 2.2e-36 157.1 119 68.9
Gorai.009G408400 Gossypium raimondii HOM05D004175 ORTHO05D004664 2.1e-34 150.6 207 64.7
BraA03t14262Z Brassica rapa HOM05D004175 ORTHO05D004664 1.3e-31 141.4 152 55.3
Glyma.08G276800 Glycine max HOM05D004175 ORTHO05D004664 3.7e-31 139.8 151 55.0
MD03G1179500 Malus domestica HOM05D004175 ORTHO05D004664 1.4e-30 137.9 166 54.8
Gohir.D04G104800 Gossypium hirsutum HOM05D004175 ORTHO05D004664 3.1e-30 136.7 183 69.4
Cre05.g234655 Chlamydomonas reinhardtii HOM05D004175 ORTHO05D004664 8.2e-23 112.1 146 45.2
FAN10G3778 Fragaria x ananassa HOM05D004175 ORTHO05D004664 2.2e-20 104.0 93 62.4
FAN10G1780 Fragaria x ananassa HOM05D004175 ORTHO05D004664 1.1e-19 101.7 93 61.3
FAN10G3383 Fragaria x ananassa HOM05D004175 ORTHO05D004664 1.1e-19 101.7 93 61.3
FAN10G2625 Fragaria x ananassa HOM05D004175 ORTHO05D004664 3.9e-17 93.2 86 60.5
COL.COLO4_34775 Corchorus olitorius HOM05D004175 ORTHO05D004664 1.4e-14 84.7 96 49.0
PRCOL_00004941 Prasinoderma coloniale HOM05D004175 ORTHO05D004664 2.4e-14 84.0 329 26.4
MBI04_g44954_MAGBIO Magnolia biondii HOM05D004175 ORTHO05D004664 3.1e-14 83.6 163 49.7
FAN28G1141 Fragaria x ananassa HOM05D004175 ORTHO05D004664 9.1e-14 82.0 78 59.0
FAN18G1628 Fragaria x ananassa HOM05D005966 ORTHO05D007584 1.2e-13 81.6 67 65.7
FvH4_5g23601 Fragaria vesca HOM05D004175 ORTHO05D045656 2.6e-13 80.5 67 65.7
C03p68800 Brassica napus HOM05D004175 ORTHO05D004664 4.5e-13 79.7 58 62.1
BolC9t58072H Brassica oleracea HOM05D004175 ORTHO05D004664 6.5e-12 75.9 96 42.7
C09p52070 Brassica napus HOM05D004175 ORTHO05D004664 6.1e-10 69.3 102 40.2
BolC4t22068H Brassica oleracea HOM05D004175 ORTHO05D004664 1.8e-09 67.8 82 43.9
FAN20G2587 Fragaria x ananassa HOM05D000366 ORTHO05D000437 1.1e-08 65.1 61 57.4
FAN19G2726 Fragaria x ananassa HOM05D004175 ORTHO05D004664 1.7e-07 61.2 53 62.3
FvH4_3g18060 Fragaria vesca HOM05D004175 ORTHO05D004664 3.7e-07 60.1 80 43.8


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