Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g09930 Coffea canephora HOM05D005514 ORTHO05D006563 1.8e-187 659.1 319 100.0
Dinv36656 Davidia involucrata HOM05D005514 ORTHO05D006563 1.0e-110 404.1 307 69.1
Thecc.09G107100 Theobroma cacao HOM05D005514 ORTHO05D006563 1.2e-106 390.6 300 68.0
Hma1.2p1_1151F.1_g261950 Hydrangea macrophylla HOM05D005514 ORTHO05D006563 1.5e-106 390.2 300 69.0
Duzib168G0165 Durio zibethinus HOM05D005514 ORTHO05D006563 2.0e-106 389.8 299 68.2
Dinv41624 Davidia involucrata HOM05D005514 ORTHO05D006563 3.5e-103 379.0 301 65.8
Nitab4.5_0000010g0010 Nicotiana tabacum HOM05D005514 ORTHO05D006563 3.0e-102 375.9 309 64.1
QL02p045925 Quercus lobata HOM05D005514 ORTHO05D006563 4.3e-101 372.1 306 64.7
Sabra06G0124000 Salix brachista HOM05D005514 ORTHO05D006563 9.6e-101 370.9 297 64.3
Peaxi162Scf00031g00232 Petunia axillaris HOM05D005514 ORTHO05D006563 8.1e-100 367.9 300 65.3
Manes.03G023100 Manihot esculenta HOM05D005514 ORTHO05D006563 1.8e-99 366.7 298 67.8
CiPaw.03G229100 Carya illinoinensis HOM05D005514 ORTHO05D006563 2.0e-98 363.2 310 62.9
Oeu002248.1 Olea europaea HOM05D005514 ORTHO05D006563 2.6e-98 362.8 298 65.8
Nitab4.5_0000952g0010 Nicotiana tabacum HOM05D005514 ORTHO05D006563 3.4e-98 362.5 297 64.0
Atru.chr7.1371 Acer truncatum HOM05D005514 ORTHO05D006563 2.9e-97 359.4 317 65.0
AUR62010955 Chenopodium quinoa HOM05D005514 ORTHO05D006563 3.8e-97 359.0 304 65.8
CAN.G148.5 Capsicum annuum HOM05D005514 ORTHO05D006563 1.6e-95 353.6 298 64.8
CiPaw.04G162600 Carya illinoinensis HOM05D005514 ORTHO05D006563 1.6e-95 353.6 301 64.5
CANSAT02G0006 Cannabis sativa HOM05D005514 ORTHO05D006563 6.0e-95 351.7 300 61.7
vmacro06229 Vaccinium macrocarpon HOM05D005514 ORTHO05D006563 2.3e-94 349.7 314 63.1
CSS0000167 Camellia sinensis var. sinensis HOM05D005514 ORTHO05D006563 3.0e-94 349.4 308 63.6
Gohir.D08G262600 Gossypium hirsutum HOM05D005514 ORTHO05D006563 7.4e-93 344.7 303 63.7
Duzib150G0489 Durio zibethinus HOM05D005514 ORTHO05D006563 8.2e-92 341.3 302 65.6
Actinidia32673 Actinidia chinensis HOM05D005514 ORTHO05D006563 4.1e-91 339.0 293 64.5
Cfa003235 Carpinus fangiana HOM05D005514 ORTHO05D006563 5.3e-91 338.6 304 60.5
MD02G1042900 Malus domestica HOM05D005514 ORTHO05D006563 9.0e-91 337.8 304 61.8
Gorai.004G280600 Gossypium raimondii HOM05D005514 ORTHO05D006563 1.7e-89 333.6 302 61.6
Oeu064593.1 Olea europaea HOM05D005514 ORTHO05D006563 1.9e-88 330.1 335 60.0
Eucgr.C01267 Eucalyptus grandis HOM05D005514 ORTHO05D006563 3.2e-88 329.3 301 61.1
RcHm_v2.0_Chr2g0089981 Rosa chinensis HOM05D005514 ORTHO05D006563 3.2e-88 329.3 300 62.0
Ciclev10008655m.g Citrus clementina HOM05D005514 ORTHO05D006563 4.2e-88 328.9 317 61.2
Hund09218 Selenicereus undatus HOM05D005514 ORTHO05D006563 1.3e-86 323.9 303 62.4
FvH4_1g04330 Fragaria vesca HOM05D005514 ORTHO05D006563 5.1e-86 322.0 299 60.9
Gohir.A08G241800 Gossypium hirsutum HOM05D005514 ORTHO05D006563 1.1e-85 320.9 302 59.9
FAN26G2817 Fragaria x ananassa HOM05D005514 ORTHO05D006563 1.5e-85 320.5 299 60.5
ClCG06G008760 Citrullus lanatus HOM05D005514 ORTHO05D006563 2.8e-84 316.2 312 56.7
EL10Ac8g18440 Beta vulgaris HOM05D005514 ORTHO05D006563 1.8e-83 313.5 305 60.0
FAN19G0406 Fragaria x ananassa HOM05D005514 ORTHO05D006563 1.8e-83 313.5 299 60.2
PGSC0003DMG400027426 Solanum tuberosum HOM05D005514 ORTHO05D006563 1.8e-83 313.5 301 57.8
FAN23G0542 Fragaria x ananassa HOM05D005514 ORTHO05D006563 1.5e-82 310.5 302 59.3
CsaV3_1G045730 Cucumis sativus L. HOM05D005514 ORTHO05D006563 4.5e-82 308.9 313 56.2
Ca_25539_v3 Cicer arietinum L. HOM05D005514 ORTHO05D006563 5.9e-82 308.5 313 59.7
MELO3C024688.2 Cucumis melo HOM05D005514 ORTHO05D006563 5.9e-82 308.5 322 55.6
Prupe.7G234000 Prunus persica HOM05D005514 ORTHO05D006563 5.9e-82 308.5 297 59.9
Solyc05g018340.4 Solanum lycopersicum HOM05D005514 ORTHO05D006563 1.7e-81 307.0 298 58.1
Sopen05g015140 Solanum pennellii HOM05D005514 ORTHO05D006563 1.7e-81 307.0 298 58.1
Actinidia07405 Actinidia chinensis HOM05D005514 ORTHO05D006563 2.2e-81 306.6 301 58.1
arahy.Tifrunner.gnm1.ann1.LW2ZPS Arachis hypogaea HOM05D005514 ORTHO05D006563 8.5e-81 304.7 303 58.1
Ah.07g205470 Amaranthus hybridus HOM05D005514 ORTHO05D006563 1.1e-80 304.3 306 61.8
Potri.006G160500 Populus trichocarpa HOM05D005514 ORTHO05D006563 1.1e-80 304.3 299 59.2
HanXRQChr10g0318661 Helianthus annuus HOM05D005514 ORTHO05D006563 2.5e-80 303.1 329 58.7
Glyma.09G192400 Glycine max HOM05D005514 ORTHO05D006563 1.6e-79 300.4 302 56.3
arahy.Tifrunner.gnm1.ann1.7WD3SA Arachis hypogaea HOM05D005514 ORTHO05D006563 2.1e-79 300.1 300 57.7
Phvul.004G165700 Phaseolus vulgaris HOM05D005514 ORTHO05D006563 6.1e-79 298.5 302 57.0
Medtr6g087890 Medicago truncatula HOM05D005514 ORTHO05D006563 1.0e-78 297.7 307 59.6
MSTRG.10624 Avicennia marina HOM05D005514 ORTHO05D006563 1.8e-78 297.0 294 58.5
Lalb_Chr24g0397401 Lupinus albus HOM05D005514 ORTHO05D006563 4.3e-77 292.4 304 56.6
Potri.018G083100 Populus trichocarpa HOM05D005514 ORTHO05D006563 1.3e-76 290.8 316 54.4
VMungo0464G0467 Vigna mungo HOM05D005514 ORTHO05D006563 6.3e-76 288.5 302 56.3
Cpa.g.sc23.79 Carica papaya HOM05D005514 ORTHO05D006563 1.4e-75 287.3 238 65.1
Lalb_Chr22g0352701 Lupinus albus HOM05D005514 ORTHO05D006563 1.4e-75 287.3 300 56.0
MSTRG.26360 Avicennia marina HOM05D005514 ORTHO05D006563 4.1e-75 285.8 298 57.0
AUR62021464 Chenopodium quinoa HOM05D005514 ORTHO05D006563 5.3e-75 285.4 304 56.9
Psat1g044240 Pisum sativum HOM05D005514 ORTHO05D006563 6.9e-75 285.0 322 55.0
ECA234G0189 Erigeron canadensis HOM05D005514 ORTHO05D006563 1.5e-74 283.9 330 56.7
Glyma.07G084500 Glycine max HOM05D005514 ORTHO05D006563 1.3e-73 280.8 306 56.2
TAR383G0343 Trochodendron aralioides HOM05D001777 ORTHO05D001809 1.3e-73 280.8 299 55.9
Nn2g11677 Nelumbo nucifera HOM05D005514 ORTHO05D006563 5.0e-73 278.9 303 59.1
Sed0026603 Sechium edule HOM05D005514 ORTHO05D006563 8.5e-73 278.1 372 44.4
MD15G1181700 Malus domestica HOM05D005514 ORTHO05D006563 2.5e-72 276.6 305 54.1
Lalb_Chr14g0371621 Lupinus albus HOM05D005514 ORTHO05D006563 1.0e-70 271.2 302 56.3
TAR624G0612 Trochodendron aralioides HOM05D005514 ORTHO05D006563 2.3e-70 270.0 281 58.0
Sed0015833 Sechium edule HOM05D005514 ORTHO05D006563 1.5e-69 267.3 317 50.8
TPR.G10049 Trifolium pratense HOM05D005514 ORTHO05D006563 9.7e-69 264.6 337 51.3
Lj2g0026530 Lotus japonicus HOM05D005514 ORTHO05D006563 1.1e-67 261.2 348 49.4
TWI23G1143 Tripterygium wilfordii HOM05D005514 ORTHO05D006563 1.8e-67 260.4 291 53.6
COL.COLO4_34823 Corchorus olitorius HOM05D005514 ORTHO05D006563 2.4e-67 260.0 300 51.3
DCAR_028696 Daucus carota HOM05D005514 ORTHO05D006563 1.2e-66 257.7 339 48.4
Haze_25771 Corylus avellana HOM05D005514 ORTHO05D006563 3.8e-65 252.7 231 60.2
Sc18g0001310 Simmondsia chinensis HOM05D005514 ORTHO05D006563 1.8e-62 243.8 302 53.3
MBI14_g08031_MAGBIO Magnolia biondii HOM05D005514 ORTHO05D006563 6.3e-60 235.3 343 45.5
MBI04_g19180_MAGBIO Magnolia biondii HOM05D005514 ORTHO05D006563 3.1e-59 233.0 313 47.3
PGR142G2557 Punica granatum HOM05D005514 ORTHO05D006563 2.0e-58 230.3 304 50.7
Rhsim03G0240000 Rhododendron simsii HOM05D005514 ORTHO05D006563 1.1e-56 224.6 216 62.0
THA.LOC104804022 Tarenaya hassleriana HOM05D005514 ORTHO05D006563 2.5e-56 223.4 303 50.5
PSO782G4531 Papaver somniferum HOM05D005514 ORTHO05D006563 2.7e-55 219.9 336 45.8
Aqoxy7G01583 Aquilegia oxysepala HOM05D005514 ORTHO05D006563 4.7e-55 219.2 272 52.2
Sabra18G0070900 Salix brachista HOM05D005514 ORTHO05D006563 3.0e-54 216.5 207 55.6
Lj7A655G38 Lonicera japonica HOM05D005514 ORTHO05D006563 1.2e-53 214.5 235 54.9
THA.LOC104820053 Tarenaya hassleriana HOM05D005514 ORTHO05D006563 5.7e-53 212.2 305 48.9
SEGI_01979 Sequoiadendron giganteum HOM05D005514 ORTHO05D006563 1.4e-51 207.6 292 47.3
PSO566G0157 Papaver somniferum HOM05D005514 ORTHO05D006563 2.4e-51 206.8 323 46.4
Aa31LG8G17060 Aethionema arabicum HOM05D005514 ORTHO05D006563 9.1e-51 204.9 312 47.1
GSVIVG01015362001 Vitis vinifera HOM05D005514 ORTHO05D006563 2.9e-49 199.9 188 59.0
Lsat_1_v5_gn_5_102941 Lactuca sativa HOM05D005514 ORTHO05D006563 2.7e-47 193.4 237 54.4
Migut.K00501 Erythranthe guttata HOM05D005514 ORTHO05D006563 4.9e-44 182.6 298 45.0
ATR0315G038 Amborella trichopoda HOM05D005514 ORTHO05D006563 8.3e-44 181.8 313 42.8
Thhalv10025603m.g Eutrema salsugineum HOM05D005514 ORTHO05D006563 1.1e-43 181.4 318 44.0
Sp7g26930 Schrenkiella parvula HOM05D005514 ORTHO05D006563 1.8e-43 180.6 313 46.0
CDE05G1480 Ceratophyllum demersum HOM05D005514 ORTHO05D006563 2.0e-42 177.2 297 40.7
AL7G23470 Arabidopsis lyrata HOM05D005514 ORTHO05D006563 1.3e-41 174.5 319 42.0
Carub.0007s1165 Capsella rubella HOM05D005514 ORTHO05D006563 1.3e-41 174.5 324 43.5
BcaNung00443 Brassica carinata HOM05D005514 ORTHO05D006563 7.3e-40 168.7 307 45.0
BolC1t01016H Brassica oleracea HOM05D001777 ORTHO05D006510 3.6e-39 166.4 304 45.7
CARHR236720 Cardamine hirsuta HOM05D005514 ORTHO05D006563 3.6e-39 166.4 317 43.8
AT4G28990 Arabidopsis thaliana HOM05D005514 ORTHO05D006563 1.0e-38 164.9 322 41.9
BcaNung01339 Brassica carinata HOM05D005514 ORTHO05D006563 5.2e-38 162.5 313 44.1
Zm00001eb147430 Zea mays HOM05D005514 ORTHO05D006563 6.8e-38 162.2 310 39.4
C01p10530 Brassica napus HOM05D001777 ORTHO05D006510 1.5e-37 161.0 307 44.3
A01p08990 Brassica napus HOM05D001777 ORTHO05D006510 3.7e-36 156.4 304 44.1
BcaNung00440 Brassica carinata HOM05D005514 ORTHO05D006563 3.0e-33 146.7 331 39.3
CDE05G2615 Ceratophyllum demersum HOM05D005514 ORTHO05D006563 8.6e-33 145.2 295 40.0
Os06g0332900 Oryza sativa ssp. japonica HOM05D005514 ORTHO05D006563 1.5e-32 144.4 307 41.0
BraA03t14917Z Brassica rapa HOM05D005514 ORTHO05D006563 3.3e-32 143.3 296 42.6
Nn3g18098 Nelumbo nucifera HOM05D005514 ORTHO05D006563 1.6e-31 141.0 118 68.6
BcaC09g51675 Brassica carinata HOM05D005514 ORTHO05D006563 2.6e-29 133.7 303 39.6
HPP92_000517 Vanilla planifolia HOM05D005514 ORTHO05D006563 2.0e-26 124.0 298 38.9
Os02g0274700 Oryza sativa ssp. japonica HOM05D005514 ORTHO05D006563 4.6e-26 122.9 270 39.3
BcaNung02893 Brassica carinata HOM05D005514 ORTHO05D006563 1.3e-25 121.3 310 39.7
C07p56560 Brassica napus HOM05D005514 ORTHO05D006563 1.3e-25 121.3 310 39.7
SEGI_18875 Sequoiadendron giganteum HOM05D005514 ORTHO05D006563 1.7e-25 120.9 347 36.0
Mapoly0001s0121 Marchantia polymorpha HOM05D005514 ORTHO05D006563 2.5e-24 117.1 312 36.9
BolC7t46134H Brassica oleracea HOM05D005514 ORTHO05D006563 7.3e-24 115.5 283 40.3
Pp3c14_23580 Physcomitrium patens HOM05D005514 ORTHO05D006563 6.8e-22 109.0 306 36.3
unitig_0.g2554 Utricularia gibba HOM05D005514 ORTHO05D006563 6.8e-22 109.0 137 50.4
SGA_v2.0_scaffold92G28280 Striga asiatica HOM05D005514 ORTHO05D006563 3.9e-17 93.2 182 41.2
SMO169G0168 Selaginella moellendorffii HOM05D005514 ORTHO05D006563 2.4e-11 73.9 113 46.0
SMO116G0230 Selaginella moellendorffii HOM05D005514 ORTHO05D006563 2.5e-08 63.9 47 66.0
CBR_g44542 Chara braunii HOM05D005514 ORTHO05D006563 2.8e-07 60.5 235 36.2
AagrBONN_evm.TU.Sc2ySwM_344.197 Anthoceros agrestis HOM05D005514 ORTHO05D006563 4.7e-07 59.7 141 37.6


User provided reference genes

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