Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g08720 Coffea canephora HOM05D006513 ORTHO05D008150 6.1e-103 377.5 188 100.0
Dinv41526 Davidia involucrata HOM05D006513 ORTHO05D008150 6.1e-87 324.3 187 86.1
Hma1.2p1_0665F.1_g199090 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 9.7e-85 317.0 188 81.4
GSVIVG01015511001 Vitis vinifera HOM05D006513 ORTHO05D008150 2.1e-79 299.3 188 76.6
CiPaw.03G242700 Carya illinoinensis HOM05D006513 ORTHO05D008150 2.7e-79 298.9 188 73.9
Actinidia26398 Actinidia chinensis HOM05D006513 ORTHO05D008150 3.0e-78 295.4 188 73.9
Nitab4.5_0007523g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 5.2e-78 294.7 191 79.6
Peaxi162Scf00984g00021 Petunia axillaris HOM05D006513 ORTHO05D008150 6.7e-78 294.3 189 76.7
Manes.06G049600 Manihot esculenta HOM05D006513 ORTHO05D008150 1.2e-77 293.5 188 72.9
Manes.14G131100 Manihot esculenta HOM05D006513 ORTHO05D008150 1.2e-77 293.5 188 72.3
Nitab4.5_0002556g0080 Nicotiana tabacum HOM05D006513 ORTHO05D008150 1.2e-77 293.5 191 77.5
CSS0037158 Camellia sinensis var. sinensis HOM05D006513 ORTHO05D008150 2.6e-77 292.4 191 73.8
Haze_25608 Corylus avellana HOM05D006513 ORTHO05D008150 2.6e-77 292.4 185 73.0
Lsat_1_v5_gn_7_45681 Lactuca sativa HOM05D006513 ORTHO05D008150 6.3e-76 287.7 185 77.3
Ciclev10009612m.g Citrus clementina HOM05D006513 ORTHO05D008150 3.1e-75 285.4 189 72.0
Gorai.001G041200 Gossypium raimondii HOM05D006513 ORTHO05D008150 4.1e-75 285.0 190 71.6
ECA240G2511 Erigeron canadensis HOM05D006513 ORTHO05D008150 9.1e-75 283.9 189 75.1
TPR.G10698 Trifolium pratense HOM05D006513 ORTHO05D008150 9.1e-75 283.9 194 72.7
PGR102G1904 Punica granatum HOM05D006513 ORTHO05D008150 1.6e-74 283.1 189 69.8
Sopen12g002610 Solanum pennellii HOM05D006513 ORTHO05D008150 2.0e-74 282.7 189 74.1
CAN.G377.11 Capsicum annuum HOM05D006513 ORTHO05D008150 2.7e-74 282.3 189 74.6
HanXRQChr09g0242331 Helianthus annuus HOM05D006513 ORTHO05D008150 2.7e-74 282.3 190 74.2
Solyc12g006660.2 Solanum lycopersicum HOM05D006513 ORTHO05D008150 2.7e-74 282.3 189 73.5
Gohir.A07G035100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 3.5e-74 282.0 188 69.7
Lj4g0014130 Lotus japonicus HOM05D006513 ORTHO05D008150 3.5e-74 282.0 194 71.1
Thecc.09G123900 Theobroma cacao HOM05D006513 ORTHO05D008150 4.5e-74 281.6 188 68.6
vmacro06122 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 5.9e-74 281.2 189 72.0
vmacro06182 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 5.9e-74 281.2 189 72.0
Eucgr.C04187 Eucalyptus grandis HOM05D006513 ORTHO05D008150 1.0e-73 280.4 189 69.3
TWI34G1228 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 1.7e-73 279.6 188 69.7
Gohir.D07G039100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 2.2e-73 279.3 188 69.7
Potri.018G066700 Populus trichocarpa HOM05D006513 ORTHO05D008150 2.2e-73 279.3 189 70.4
PSO455G0031 Papaver somniferum HOM05D006513 ORTHO05D008150 5.0e-73 278.1 190 70.5
Sabra18G0060100 Salix brachista HOM05D006513 ORTHO05D008150 5.0e-73 278.1 189 69.8
Rhsim03G0247400 Rhododendron simsii HOM05D006513 ORTHO05D008150 6.5e-73 277.7 191 71.2
PGSC0003DMG401020668 Solanum tuberosum HOM05D006513 ORTHO05D008150 8.5e-73 277.3 189 73.0
PSO170G2269 Papaver somniferum HOM05D006513 ORTHO05D008150 1.5e-72 276.6 190 70.0
Ah.09g225970 Amaranthus hybridus HOM05D006513 ORTHO05D008150 1.9e-72 276.2 185 70.8
Psat4g039440 Pisum sativum HOM05D006513 ORTHO05D008150 3.2e-72 275.4 197 70.1
Hma1.2p1_3730F.1_g337400 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 4.2e-72 275.0 191 72.3
arahy.Tifrunner.gnm1.ann1.7JIW3E Arachis hypogaea HOM05D006513 ORTHO05D008150 7.2e-72 274.2 195 68.7
Oeu021588.1 Olea europaea HOM05D006513 ORTHO05D008150 7.2e-72 274.2 158 84.8
Sed0011750 Sechium edule HOM05D006513 ORTHO05D008150 7.2e-72 274.2 188 68.1
Prupe.7G240600 Prunus persica HOM05D006513 ORTHO05D008150 2.1e-71 272.7 187 69.0
Duzib187G1241 Durio zibethinus HOM05D006513 ORTHO05D008150 2.7e-71 272.3 188 67.0
Carub.0006s1850 Capsella rubella HOM05D006513 ORTHO05D008150 3.0e-70 268.9 189 69.3
CARHR192710 Cardamine hirsuta HOM05D006513 ORTHO05D008150 5.2e-70 268.1 189 68.3
Actinidia07430 Actinidia chinensis HOM05D006513 ORTHO05D008150 6.8e-70 267.7 190 71.1
MD02G1034700 Malus domestica HOM05D006513 ORTHO05D008150 6.8e-70 267.7 187 68.4
Nn2g12003 Nelumbo nucifera HOM05D006513 ORTHO05D008150 6.8e-70 267.7 188 69.1
Sp6g24280 Schrenkiella parvula HOM05D006513 ORTHO05D008150 6.8e-70 267.7 189 68.3
AL6G31670 Arabidopsis lyrata HOM05D006513 ORTHO05D008150 1.2e-69 266.9 189 68.3
AUR62033489 Chenopodium quinoa HOM05D006513 ORTHO05D008150 1.2e-69 266.9 190 68.4
TWI63G1281 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 1.5e-69 266.5 192 67.7
QL02p087926 Quercus lobata HOM05D006513 ORTHO05D008150 2.0e-69 266.2 250 55.2
EL10Ac8g18628 Beta vulgaris HOM05D006513 ORTHO05D008150 4.4e-69 265.0 185 68.6
CANSAT11G2038 Cannabis sativa HOM05D006513 ORTHO05D008150 5.7e-69 264.6 188 66.5
Sc08g0006720 Simmondsia chinensis HOM05D006513 ORTHO05D008150 7.5e-69 264.2 189 67.2
AT5G20120 Arabidopsis thaliana HOM05D006513 ORTHO05D008150 1.7e-68 263.1 189 67.2
Glyma.13G168100 Glycine max HOM05D006513 ORTHO05D008150 1.7e-68 263.1 195 68.2
Glyma.17G115800 Glycine max HOM05D006513 ORTHO05D008150 1.7e-68 263.1 195 67.2
Duzib150G1190 Durio zibethinus HOM05D006513 ORTHO05D008150 4.8e-68 261.5 184 66.3
Thhalv10014769m.g Eutrema salsugineum HOM05D006513 ORTHO05D008150 6.3e-68 261.2 189 68.8
Gohir.A08G239200 Gossypium hirsutum HOM05D006513 ORTHO05D008150 8.3e-68 260.8 188 65.4
Phvul.003G163500 Phaseolus vulgaris HOM05D006513 ORTHO05D008150 1.1e-67 260.4 195 66.2
BcaC03g13734 Brassica carinata HOM05D006513 ORTHO05D008150 1.8e-67 259.6 189 66.7
BcaB05g22870 Brassica carinata HOM05D006513 ORTHO05D008150 3.1e-67 258.8 189 66.1
BolC2t07016H Brassica oleracea HOM05D006513 ORTHO05D008150 5.4e-67 258.1 189 66.1
Aa31LG1G14240 Aethionema arabicum HOM05D006513 ORTHO05D008150 1.2e-66 256.9 189 66.1
A02p06050 Brassica napus HOM05D006513 ORTHO05D008150 1.2e-66 256.9 189 66.1
BraA02t05556Z Brassica rapa HOM05D006513 ORTHO05D008150 1.2e-66 256.9 189 66.1
Lalb_Chr13g0301941 Lupinus albus HOM05D006513 ORTHO05D008150 1.2e-66 256.9 200 68.0
Nn8g39411 Nelumbo nucifera HOM05D006513 ORTHO05D008150 2.7e-66 255.8 188 68.6
HanXRQChr03g0062541 Helianthus annuus HOM05D006513 ORTHO05D008150 3.5e-66 255.4 189 69.3
THA.LOC104799645 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 3.5e-66 255.4 189 65.6
Aqoxy7G02130 Aquilegia oxysepala HOM05D006513 ORTHO05D008150 4.5e-66 255.0 189 67.2
RcHm_v2.0_Chr2g0089051 Rosa chinensis HOM05D006513 ORTHO05D008150 1.0e-65 253.8 187 65.8
Gorai.004G277700 Gossypium raimondii HOM05D006513 ORTHO05D008150 5.0e-65 251.5 222 57.7
Sed0002363 Sechium edule HOM05D006513 ORTHO05D008150 5.0e-65 251.5 189 65.6
Lalb_Chr12g0197841 Lupinus albus HOM05D006513 ORTHO05D008150 6.5e-65 251.1 200 65.0
FvH4_1g03550 Fragaria vesca HOM05D006513 ORTHO05D008150 8.6e-65 250.8 187 64.2
FAN19G1517 Fragaria x ananassa HOM05D006513 ORTHO05D008150 8.6e-65 250.8 187 64.2
FAN28G2022 Fragaria x ananassa HOM05D006513 ORTHO05D008150 2.5e-64 249.2 187 63.6
Medtr4g114105 Medicago truncatula HOM05D006513 ORTHO05D008150 2.5e-64 249.2 183 66.7
FAN26G1752 Fragaria x ananassa HOM05D006513 ORTHO05D008150 3.2e-64 248.8 187 63.6
MD15G1175500 Malus domestica HOM05D006513 ORTHO05D008150 7.2e-64 247.7 187 65.8
BNapus_Darmor_BZH_scaffold_38p01790 Brassica napus HOM05D006513 ORTHO05D008150 2.1e-63 246.1 195 63.6
TAR625G1184 Trochodendron aralioides HOM05D006513 ORTHO05D008150 2.1e-63 246.1 159 73.6
THA.LOC104811035 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 9.8e-61 237.3 174 64.9
AUR62011112 Chenopodium quinoa HOM05D000667 ORTHO05D002614 2.4e-59 232.6 160 68.1
Lj7A631T29 Lonicera japonica HOM05D006513 ORTHO05D008150 7.8e-58 227.6 144 79.2
CsaV3_1G029880 Cucumis sativus L. HOM05D006513 ORTHO05D008150 3.8e-57 225.3 146 67.8
MELO3C010361.2 Cucumis melo HOM05D006513 ORTHO05D008150 2.5e-56 222.6 141 70.9
arahy.Tifrunner.gnm1.ann1.PME717 Arachis hypogaea HOM05D006513 ORTHO05D008150 2.1e-55 219.5 190 61.1
Ca_21690_v3 Cicer arietinum L. HOM05D006513 ORTHO05D008150 2.8e-55 219.2 151 68.9
Duzib168G2120 Durio zibethinus HOM05D006513 ORTHO05D008150 6.1e-55 218.0 150 68.0
TAR626G1980 Trochodendron aralioides HOM05D006513 ORTHO05D008150 1.4e-54 216.9 144 71.5
MBI01_g37808_MAGBIO Magnolia biondii HOM05D006513 ORTHO05D008150 2.6e-53 212.6 188 58.5
ClCG06G010970 Citrullus lanatus HOM05D006513 ORTHO05D008150 1.5e-48 196.8 160 58.8
HPP92_002794 Vanilla planifolia HOM05D006513 ORTHO05D008150 7.5e-45 184.5 188 50.5
Hund26496 Selenicereus undatus HOM05D006513 ORTHO05D008150 8.3e-44 181.0 131 60.3
VMungo1215G0117 Vigna mungo HOM05D006513 ORTHO05D008150 4.7e-39 165.2 190 50.0
ATR1156G011 Amborella trichopoda HOM05D006513 ORTHO05D008150 1.9e-35 153.3 180 46.1
Nitab4.5_0017656g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 2.4e-35 152.9 96 82.3
SEGI_29438 Sequoiadendron giganteum HOM05D006513 ORTHO05D008150 9.2e-35 151.0 191 46.6
COL.COLO4_05780 Corchorus olitorius HOM05D006513 ORTHO05D008150 5.6e-32 141.7 86 70.9
Pp3c5_25700 Physcomitrium patens HOM05D006513 ORTHO05D008150 5.2e-30 135.2 161 46.6
Nitab4.5_0010819g0020 Nicotiana tabacum HOM05D005868 ORTHO05D006964 4.4e-29 132.1 89 70.8
Gohir.D08G259900 Gossypium hirsutum HOM05D006513 ORTHO05D008150 7.6e-29 131.3 117 56.4
Mapoly0015s0101 Marchantia polymorpha HOM05D006513 ORTHO05D008150 4.1e-27 125.6 162 42.6
Duzib150G1040 Durio zibethinus HOM05D006513 ORTHO05D008150 9.2e-27 124.4 94 60.6
AagrBONN_evm.TU.Sc2ySwM_340.153 Anthoceros agrestis HOM05D006513 ORTHO05D008150 2.5e-24 116.3 163 37.4
TAR636G0633 Trochodendron aralioides HOM05D005966 ORTHO05D007584 2.8e-23 112.8 86 64.0
Rhsim02G0222800 Rhododendron simsii HOM05D006513 ORTHO05D008150 8.1e-23 111.3 75 72.0
TAR090G0005 Trochodendron aralioides HOM05D006513 ORTHO05D008150 1.2e-21 107.5 65 75.4
CBR_g6525 Chara braunii HOM05D006513 ORTHO05D008150 2.6e-21 106.3 137 39.4
HPP92_027747 Vanilla planifolia HOM05D006513 ORTHO05D008150 1.1e-14 84.3 100 47.0
AUR62043674 Chenopodium quinoa HOM05D006513 ORTHO05D003876 5.4e-11 72.0 47 72.3
Pp3c25_13070 Physcomitrium patens HOM05D006513 ORTHO05D008150 9.3e-11 71.2 95 34.7
vmacro22116 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 1.1e-08 64.3 96 43.8
Cpa.g.sc75.50 Carica papaya HOM05D006513 ORTHO05D008150 4.3e-08 62.4 45 73.3
RcHm_v2.0_Chr7g0212941 Rosa chinensis HOM05D006513 ORTHO05D008150 4.3e-08 62.4 32 93.8


User provided reference genes

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