Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g08510 Coffea canephora HOM05D007698 ORTHO05D009663 7.4e-121 437.2 215 100.0
Rhsim03G0248000 Rhododendron simsii HOM05D007698 ORTHO05D009663 8.8e-82 307.4 211 71.6
Actinidia07425 Actinidia chinensis HOM05D007698 ORTHO05D009663 7.5e-81 304.3 211 71.6
Ciclev10009487m.g Citrus clementina HOM05D007698 ORTHO05D009663 1.2e-78 297.0 212 71.2
CAN.G311.17 Capsicum annuum HOM05D007698 ORTHO05D009663 1.3e-77 293.5 218 67.9
Cfa003373 Carpinus fangiana HOM05D007698 ORTHO05D009663 3.8e-77 292.0 212 68.9
Sopen04g034950 Solanum pennellii HOM05D007698 ORTHO05D009663 3.8e-77 292.0 217 69.1
Solyc04g081330.4 Solanum lycopersicum HOM05D007698 ORTHO05D009663 5.0e-77 291.6 217 68.7
Atru.chr7.1161 Acer truncatum HOM05D007698 ORTHO05D009663 6.5e-77 291.2 212 70.3
PGSC0003DMG400003777 Solanum tuberosum HOM05D007698 ORTHO05D009663 8.5e-77 290.8 217 69.6
QL10p023449 Quercus lobata HOM05D007698 ORTHO05D009663 1.9e-76 289.7 212 69.3
Eucgr.C01174 Eucalyptus grandis HOM05D007698 ORTHO05D009663 4.2e-76 288.5 213 67.6
Cpa.g.sc75.28 Carica papaya HOM05D007698 ORTHO05D009663 9.4e-76 287.3 217 67.3
Oeu055888.1 Olea europaea HOM05D007698 ORTHO05D009663 1.6e-75 286.6 216 66.2
Gohir.A06G056000 Gossypium hirsutum HOM05D007698 ORTHO05D009663 2.1e-75 286.2 209 71.3
Gorai.010G064000 Gossypium raimondii HOM05D007698 ORTHO05D009663 3.6e-75 285.4 209 70.8
GSVIVG01015531001 Vitis vinifera HOM05D007698 ORTHO05D009663 3.6e-75 285.4 212 67.9
CANSAT11G0563 Cannabis sativa HOM05D007698 ORTHO05D009663 4.7e-75 285.0 214 68.2
CiPaw.04G171100 Carya illinoinensis HOM05D007698 ORTHO05D009663 2.3e-74 282.7 212 67.9
arahy.Tifrunner.gnm1.ann1.W83AFC Arachis hypogaea HOM05D007698 ORTHO05D009663 3.0e-74 282.3 215 66.5
PGR142G3861 Punica granatum HOM05D007698 ORTHO05D009663 4.0e-74 282.0 212 69.3
arahy.Tifrunner.gnm1.ann1.K2HWUU Arachis hypogaea HOM05D007698 ORTHO05D009663 5.2e-74 281.6 215 66.5
TAR625G0118 Trochodendron aralioides HOM05D007698 ORTHO05D009663 5.2e-74 281.6 216 66.7
HanXRQChr10g0315501 Helianthus annuus HOM05D007698 ORTHO05D009663 6.8e-74 281.2 216 68.1
Thecc.09G126500 Theobroma cacao HOM05D007698 ORTHO05D009663 1.2e-73 280.4 209 68.4
FAN23G0447 Fragaria x ananassa HOM05D007698 ORTHO05D009663 2.6e-73 279.3 213 68.5
RcHm_v2.0_Chr2g0088411 Rosa chinensis HOM05D007698 ORTHO05D009663 2.6e-73 279.3 213 68.1
Nn2g12029 Nelumbo nucifera HOM05D007698 ORTHO05D009663 4.4e-73 278.5 215 65.6
MSTRG.19596 Avicennia marina HOM05D007698 ORTHO05D009663 7.5e-73 277.7 212 66.0
MD02G1032500 Malus domestica HOM05D007698 ORTHO05D009663 7.5e-73 277.7 213 67.1
Peaxi162Scf00684g00033 Petunia axillaris HOM05D007698 ORTHO05D009663 9.8e-73 277.3 218 65.6
FAN28G0224 Fragaria x ananassa HOM05D007698 ORTHO05D009663 2.2e-72 276.2 213 67.6
Nitab4.5_0008782g0040 Nicotiana tabacum HOM05D007698 ORTHO05D009663 2.2e-72 276.2 218 67.0
FvH4_1g03270 Fragaria vesca HOM05D007698 ORTHO05D009663 2.8e-72 275.8 213 67.6
Psat4g040160 Pisum sativum HOM05D007698 ORTHO05D009663 2.8e-72 275.8 218 64.2
Prupe.7G243000 Prunus persica HOM05D007698 ORTHO05D009663 3.7e-72 275.4 213 65.7
Manes.14G132100 Manihot esculenta HOM05D007698 ORTHO05D009663 4.8e-72 275.0 212 65.6
Nitab4.5_0010964g0010 Nicotiana tabacum HOM05D007698 ORTHO05D009663 1.1e-71 273.9 218 66.5
Ca_21682_v3 Cicer arietinum L. HOM05D007698 ORTHO05D009663 1.8e-71 273.1 215 63.3
Sed0013311 Sechium edule HOM05D007698 ORTHO05D009663 1.8e-71 273.1 214 66.8
CsaV3_2G002860 Cucumis sativus L. HOM05D007698 ORTHO05D009663 3.1e-71 272.3 213 65.3
TWI63G1008 Tripterygium wilfordii HOM05D007698 ORTHO05D009663 3.1e-71 272.3 211 67.3
Potri.006G069900 Populus trichocarpa HOM05D007698 ORTHO05D009663 4.1e-71 271.9 211 65.9
VMungo1215G1358 Vigna mungo HOM05D007698 ORTHO05D009663 7.0e-71 271.2 216 63.0
MELO3C004507.2 Cucumis melo HOM05D007698 ORTHO05D009663 9.1e-71 270.8 213 64.3
TPR.G10704 Trifolium pratense HOM05D007698 ORTHO05D009663 2.7e-70 269.2 216 64.4
Aqoxy7G02180 Aquilegia oxysepala HOM05D007698 ORTHO05D009663 3.5e-70 268.9 214 66.4
Phvul.003G164400 Phaseolus vulgaris HOM05D007698 ORTHO05D009663 3.5e-70 268.9 216 62.0
ECA234G1302 Erigeron canadensis HOM05D007698 ORTHO05D009663 4.5e-70 268.5 218 64.7
Lj4g0022576 Lotus japonicus HOM05D007698 ORTHO05D009663 5.9e-70 268.1 218 62.4
Hund26504 Selenicereus undatus HOM05D007698 ORTHO05D009663 5.9e-70 268.1 190 68.4
CDE06G2164 Ceratophyllum demersum HOM05D007698 ORTHO05D009663 1.0e-69 267.3 215 65.6
ClCG11G003040 Citrullus lanatus HOM05D007698 ORTHO05D009663 1.0e-69 267.3 226 62.4
PSO170G4754 Papaver somniferum HOM05D007698 ORTHO05D009663 1.7e-69 266.5 218 62.8
PSO455G0268 Papaver somniferum HOM05D007698 ORTHO05D009663 1.7e-69 266.5 218 62.4
MBI01_g36268_MAGBIO Magnolia biondii HOM05D007698 ORTHO05D009663 5.0e-69 265.0 192 68.8
Lalb_Chr13g0301871 Lupinus albus HOM05D007698 ORTHO05D009663 6.5e-69 264.6 219 60.7
Medtr4g114410 Medicago truncatula HOM05D007698 ORTHO05D009663 6.5e-69 264.6 175 73.1
arahy.Tifrunner.gnm1.ann1.DB6URZ Arachis hypogaea HOM05D007698 ORTHO05D009663 1.9e-68 263.1 192 68.2
Os05g0401200 Oryza sativa ssp. japonica HOM05D007698 ORTHO05D009663 3.2e-68 262.3 180 71.7
ATR1120G147 Amborella trichopoda HOM05D007698 ORTHO05D009663 1.2e-67 260.4 157 78.3
Migut.D01902 Erythranthe guttata HOM05D007698 ORTHO05D009663 3.6e-67 258.8 182 68.1
Mapoly0135s0019 Marchantia polymorpha HOM05D007698 ORTHO05D009663 4.7e-67 258.5 168 71.4
vmacro06130 Vaccinium macrocarpon HOM05D007698 ORTHO05D009663 8.8e-66 254.2 144 84.0
AUR62013358 Chenopodium quinoa HOM05D007698 ORTHO05D009663 1.5e-65 253.4 232 57.8
SalBow5G0976 Salvia bowleyana HOM05D007698 ORTHO05D009663 1.5e-65 253.4 148 80.4
SEGI_02335 Sequoiadendron giganteum HOM05D007698 ORTHO05D009663 2.0e-65 253.1 198 66.7
EL10Ac8g18655 Beta vulgaris HOM05D007698 ORTHO05D009663 2.6e-65 252.7 158 75.3
Glyma.13G167300 Glycine max HOM05D007698 ORTHO05D009663 7.5e-65 251.1 216 61.6
SMO351G0097 Selaginella moellendorffii HOM05D007698 ORTHO05D009663 2.2e-64 249.6 148 77.7
DCAR_020920 Daucus carota HOM05D007698 ORTHO05D009663 3.7e-64 248.8 193 67.4
Haze_25578 Corylus avellana HOM05D007698 ORTHO05D009663 6.3e-64 248.1 191 66.0
Pp3c7_12150 Physcomitrium patens HOM05D007698 ORTHO05D009663 6.3e-64 248.1 189 63.5
HPP92_024087 Vanilla planifolia HOM05D007698 ORTHO05D009663 2.4e-63 246.1 151 75.5
Hma1.2p1_2368F.1_g320690 Hydrangea macrophylla HOM05D007698 ORTHO05D009663 1.2e-59 233.8 212 58.5
FAN19G0166 Fragaria x ananassa HOM05D007698 ORTHO05D009663 2.1e-59 233.0 193 66.3
Hma1.2p1_0018F.1_g012410 Hydrangea macrophylla HOM05D007698 ORTHO05D009663 8.0e-59 231.1 211 59.2
arahy.Tifrunner.gnm1.ann1.UUR3FU Arachis hypogaea HOM05D007698 ORTHO05D009663 7.5e-57 224.6 221 55.7
AUR62011129 Chenopodium quinoa HOM05D007698 ORTHO05D009663 3.3e-52 209.1 143 71.3
Gohir.D06G054575 Gossypium hirsutum HOM05D007698 ORTHO05D009663 1.6e-51 206.8 170 66.5
SalBow5G4762 Salvia bowleyana HOM05D007698 ORTHO05D009663 4.4e-49 198.7 148 66.9
Glyma.17G114902 Glycine max HOM05D007698 ORTHO05D009663 2.3e-45 186.4 107 80.4
Cre07.g323600 Chlamydomonas reinhardtii HOM05D007698 ORTHO05D009663 5.6e-44 181.8 147 55.8
Sc08g0006600 Simmondsia chinensis HOM05D007698 ORTHO05D009663 1.2e-35 154.1 152 55.3
FAN26G2937 Fragaria x ananassa HOM05D007698 ORTHO05D009663 1.8e-34 150.2 145 60.0
SGA_v2.0_scaffold71G23757 Striga asiatica HOM05D007698 ORTHO05D009663 2.0e-33 146.7 152 54.6
Dinv36527 Davidia involucrata HOM05D007698 ORTHO05D009663 2.1e-30 136.7 127 61.4
Zm00001eb203770 Zea mays HOM05D007698 ORTHO05D009663 4.6e-30 135.6 114 62.3
MCO02G310 Micromonas commoda HOM05D007698 ORTHO05D009663 3.0e-21 106.3 153 40.5
unitig_749.g14098 Utricularia gibba HOM05D007698 ORTHO05D009663 1.5e-20 104.0 104 55.8
PRCOL_00004764 Prasinoderma coloniale HOM05D007698 ORTHO05D009663 6.7e-13 78.6 158 36.7
Hund09129 Selenicereus undatus HOM05D007698 ORTHO05D009663 6.2e-11 72.0 136 38.2


User provided reference genes

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