Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g08290 Coffea canephora HOM05D006257 ORTHO05D007708 9.0e-117 423.7 230 100.0
Atru.chr7.1126 Acer truncatum HOM05D006257 ORTHO05D007708 3.4e-63 245.7 233 64.4
Nitab4.5_0006319g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 3.4e-63 245.7 230 62.2
MD02G1029500 Malus domestica HOM05D006257 ORTHO05D007708 1.3e-62 243.8 235 61.7
Nitab4.5_0001349g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 1.3e-62 243.8 230 61.7
Prupe.7G245400 Prunus persica HOM05D006257 ORTHO05D007708 1.3e-62 243.8 236 61.0
CAN.G551.82 Capsicum annuum HOM05D006257 ORTHO05D007708 1.7e-62 243.4 230 60.0
Hma1.2p1_0931F.1_g238140 Hydrangea macrophylla HOM05D006257 ORTHO05D007708 3.7e-62 242.3 237 61.6
Sopen12g004590 Solanum pennellii HOM05D006257 ORTHO05D007708 1.1e-61 240.7 230 62.2
Solyc12g009600.2 Solanum lycopersicum HOM05D006257 ORTHO05D007708 1.8e-61 240.0 229 62.0
Peaxi162Scf00313g00815 Petunia axillaris HOM05D006257 ORTHO05D007708 5.4e-61 238.4 231 61.9
CsaV3_2G002980 Cucumis sativus L. HOM05D006257 ORTHO05D007708 7.0e-61 238.0 203 69.0
Duzib187G1365 Durio zibethinus HOM05D006257 ORTHO05D007708 7.0e-61 238.0 238 60.1
Oeu052179.2 Olea europaea HOM05D006257 ORTHO05D007708 9.2e-61 237.7 232 61.6
CSS0030940 Camellia sinensis var. sinensis HOM05D006257 ORTHO05D007708 1.2e-60 237.3 238 59.7
Potri.006G067600 Populus trichocarpa HOM05D006257 ORTHO05D007708 1.6e-60 236.9 231 61.5
Lj4g0014254 Lotus japonicus HOM05D006257 ORTHO05D007708 2.0e-60 236.5 238 61.8
MD15G1170900 Malus domestica HOM05D006257 ORTHO05D007708 2.7e-60 236.1 239 60.3
TAR636G3495 Trochodendron aralioides HOM05D006257 ORTHO05D007708 2.7e-60 236.1 233 60.9
Ciclev10009322m.g Citrus clementina HOM05D006257 ORTHO05D007708 5.9e-60 235.0 244 59.4
Lalb_Chr13g0301741 Lupinus albus HOM05D006257 ORTHO05D007708 5.9e-60 235.0 237 59.9
QL02p088998 Quercus lobata HOM05D006257 ORTHO05D007708 5.9e-60 235.0 235 57.9
Ca_06925_v3 Cicer arietinum L. HOM05D006257 ORTHO05D007708 1.0e-59 234.2 230 62.6
Potri.018G129600 Populus trichocarpa HOM05D006257 ORTHO05D007708 1.0e-59 234.2 238 61.3
Duzib168G0222 Durio zibethinus HOM05D006257 ORTHO05D007708 1.7e-59 233.4 242 59.5
Gohir.A07G036500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 1.7e-59 233.4 240 59.2
GSVIVG01015564001 Vitis vinifera HOM05D006257 ORTHO05D007708 1.7e-59 233.4 239 59.4
MELO3C004491.2 Cucumis melo HOM05D006257 ORTHO05D007708 5.0e-59 231.9 203 67.5
Glyma.06G224200 Glycine max HOM05D006257 ORTHO05D007708 5.0e-59 231.9 234 59.8
ClCG11G003160 Citrullus lanatus HOM05D006257 ORTHO05D007708 6.6e-59 231.5 218 64.7
Medtr0339s0030 Medicago truncatula HOM05D006257 ORTHO05D007708 2.5e-58 229.6 233 60.1
Actinidia21972 Actinidia chinensis HOM05D006257 ORTHO05D007708 3.3e-58 229.2 231 60.6
Cpa.g.sc46.16 Carica papaya HOM05D006257 ORTHO05D007708 3.3e-58 229.2 180 72.2
PGR102G0698 Punica granatum HOM05D006257 ORTHO05D007708 3.3e-58 229.2 234 59.8
TPR.G26482 Trifolium pratense HOM05D006257 ORTHO05D007708 3.3e-58 229.2 233 59.7
COL.COLO4_35097 Corchorus olitorius HOM05D006257 ORTHO05D007708 4.3e-58 228.8 239 59.0
Actinidia40485 Actinidia chinensis HOM05D006257 ORTHO05D007708 5.6e-58 228.4 234 59.8
Sabra06G0050300 Salix brachista HOM05D006257 ORTHO05D007708 5.6e-58 228.4 248 58.5
CiPaw.03G245900 Carya illinoinensis HOM05D006257 ORTHO05D007708 2.8e-57 226.1 232 59.5
Gorai.001G043000 Gossypium raimondii HOM05D006257 ORTHO05D007708 4.7e-57 225.3 239 58.2
Lalb_Chr07g0179081 Lupinus albus HOM05D006257 ORTHO05D007708 8.0e-57 224.6 231 60.2
CiPaw.04G172800 Carya illinoinensis HOM05D006257 ORTHO05D007708 1.0e-56 224.2 230 58.7
Thecc.09G128900 Theobroma cacao HOM05D006257 ORTHO05D007708 3.1e-56 222.6 240 57.1
Gohir.D07G040500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 4.0e-56 222.2 242 57.0
Manes.06G057000 Manihot esculenta HOM05D006257 ORTHO05D007708 4.0e-56 222.2 232 58.2
Sed0025440 Sechium edule HOM05D006257 ORTHO05D007708 6.8e-56 221.5 232 59.5
Eucgr.C04235 Eucalyptus grandis HOM05D006257 ORTHO05D007708 2.0e-55 219.9 236 59.3
Glyma.04G142800 Glycine max HOM05D006257 ORTHO05D007708 2.0e-55 219.9 230 57.4
arahy.Tifrunner.gnm1.ann1.BX3F9W Arachis hypogaea HOM05D006257 ORTHO05D007708 2.6e-55 219.5 232 59.9
Phvul.003G166300 Phaseolus vulgaris HOM05D006257 ORTHO05D007708 3.4e-55 219.2 219 59.8
Aqoxy7G02265 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 4.4e-55 218.8 233 57.1
VMungo1215G0813 Vigna mungo HOM05D006257 ORTHO05D007708 1.3e-54 217.2 219 58.4
Lj7A424T23 Lonicera japonica HOM05D006257 ORTHO05D007708 1.7e-54 216.9 230 59.1
RcHm_v2.0_Chr2g0088141 Rosa chinensis HOM05D006257 ORTHO05D007708 1.7e-54 216.9 230 58.3
Sabra18G0110100 Salix brachista HOM05D006257 ORTHO05D007708 1.7e-54 216.9 220 59.1
MSTRG.26415 Avicennia marina HOM05D006257 ORTHO05D007708 2.2e-54 216.5 234 59.4
PSO210G1348 Papaver somniferum HOM05D006257 ORTHO05D007708 2.9e-54 216.1 231 58.4
DCAR_020916 Daucus carota HOM05D006257 ORTHO05D007708 8.3e-54 214.5 231 56.7
arahy.Tifrunner.gnm1.ann1.FTT948 Arachis hypogaea HOM05D006257 ORTHO05D007708 1.4e-53 213.8 232 59.1
vmacro20574 Vaccinium macrocarpon HOM05D006257 ORTHO05D007708 1.4e-53 213.8 234 57.7
Lalb_Chr08g0234691 Lupinus albus HOM05D006257 ORTHO05D007708 1.9e-53 213.4 232 58.2
PSO210G1954 Papaver somniferum HOM05D006257 ORTHO05D007708 3.2e-53 212.6 231 57.6
THA.LOC104808977 Tarenaya hassleriana HOM05D006257 ORTHO05D007708 4.1e-53 212.2 237 57.0
CARHR250830 Cardamine hirsuta HOM05D006257 ORTHO05D007708 3.5e-52 209.1 175 66.9
Haze_25555 Corylus avellana HOM05D006257 ORTHO05D007708 4.6e-52 208.8 232 55.2
Lsat_1_v5_gn_5_95081 Lactuca sativa HOM05D006257 ORTHO05D007708 1.0e-51 207.6 225 58.2
TWI34G0058 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 1.0e-51 207.6 236 55.1
AT4G02530 Arabidopsis thaliana HOM05D006257 ORTHO05D007708 3.9e-51 205.7 186 62.9
HanXRQChr10g0315681 Helianthus annuus HOM05D006257 ORTHO05D007708 5.0e-51 205.3 230 58.7
TWI63G0502 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 1.1e-50 204.1 238 54.6
AL6G50510 Arabidopsis lyrata HOM05D006257 ORTHO05D007708 1.9e-50 203.4 189 61.4
MBI04_g29340_MAGBIO Magnolia biondii HOM05D006257 ORTHO05D007708 1.9e-50 203.4 221 57.9
AUR62011151 Chenopodium quinoa HOM05D006257 ORTHO05D007708 3.3e-50 202.6 225 56.0
SGA_v2.0_scaffold63G21838 Striga asiatica HOM05D006257 ORTHO05D007708 3.3e-50 202.6 196 59.7
ECA234G3820 Erigeron canadensis HOM05D006257 ORTHO05D007708 4.3e-50 202.2 230 57.0
EL10Ac8g18684 Beta vulgaris HOM05D006257 ORTHO05D007708 7.3e-50 201.4 191 60.2
A09p01980 Brassica napus HOM05D006257 ORTHO05D007708 2.1e-49 199.9 234 53.8
BraA09t35849Z Brassica rapa HOM05D006257 ORTHO05D007708 2.1e-49 199.9 234 53.4
Carub.0006s3460 Capsella rubella HOM05D006257 ORTHO05D007708 2.1e-49 199.9 189 59.8
Sp6g02450 Schrenkiella parvula HOM05D006257 ORTHO05D007708 2.8e-49 199.5 233 54.1
Hund09262 Selenicereus undatus HOM05D006257 ORTHO05D007708 2.8e-49 199.5 242 51.2
BolC9t53138H Brassica oleracea HOM05D006257 ORTHO05D007708 1.1e-48 197.6 237 53.6
Thhalv10028953m.g Eutrema salsugineum HOM05D006257 ORTHO05D007708 1.1e-48 197.6 233 53.2
Ah.09g225230 Amaranthus hybridus HOM05D006257 ORTHO05D007708 1.4e-48 197.2 171 61.4
C09p02090 Brassica napus HOM05D006257 ORTHO05D007708 1.8e-48 196.8 234 53.4
Aa31LG5G2160 Aethionema arabicum HOM05D006257 ORTHO05D007708 3.1e-48 196.1 240 55.0
Migut.K00442 Erythranthe guttata HOM05D006257 ORTHO05D007708 3.1e-48 196.1 255 51.8
AUR62013336 Chenopodium quinoa HOM05D006257 ORTHO05D007708 5.2e-48 195.3 243 52.7
Oeu038255.2 Olea europaea HOM05D006257 ORTHO05D007708 6.8e-48 194.9 267 47.9
TAR625G1128 Trochodendron aralioides HOM05D006257 ORTHO05D007708 6.8e-48 194.9 149 71.1
BcaC04g23996 Brassica carinata HOM05D006257 ORTHO05D007708 8.9e-48 194.5 237 53.2
unitig_37.g12643 Utricularia gibba HOM05D006257 ORTHO05D007708 1.2e-47 194.1 230 51.7
Glyma.17G113300 Glycine max HOM05D006257 ORTHO05D007708 4.9e-46 188.7 174 62.6
ATR0598G180 Amborella trichopoda HOM05D006257 ORTHO05D007708 1.1e-45 187.6 221 53.8
FAN28G1785 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.1e-45 187.6 220 55.0
FAN23G1258 Fragaria x ananassa HOM05D006257 ORTHO05D007708 3.2e-45 186.0 220 54.5
FAN19G0162 Fragaria x ananassa HOM05D006257 ORTHO05D007708 4.1e-45 185.7 174 62.6
FvH4_1g03010 Fragaria vesca HOM05D006257 ORTHO05D007708 5.4e-45 185.3 220 54.5
FAN26G0886 Fragaria x ananassa HOM05D006257 ORTHO05D007708 5.4e-45 185.3 220 54.5
HPP92_024114 Vanilla planifolia HOM05D006257 ORTHO05D007708 1.2e-44 184.1 198 57.1
HPP92_024119 Vanilla planifolia HOM05D006257 ORTHO05D007708 2.1e-44 183.3 198 56.1
CDE07G0641 Ceratophyllum demersum HOM05D006257 ORTHO05D007708 6.0e-44 181.8 220 53.6
Dinv36505 Davidia involucrata HOM05D006257 ORTHO05D007708 1.0e-43 181.0 178 61.8
CANSAT11G2152 Cannabis sativa HOM05D006257 ORTHO05D007708 1.7e-43 180.3 134 70.9
Os06g0705100 Oryza sativa ssp. japonica HOM05D006257 ORTHO05D007708 5.6e-42 175.3 188 53.7
Sc14g0000190 Simmondsia chinensis HOM05D006257 ORTHO05D007708 2.8e-41 172.9 174 58.0
Nn8g39488 Nelumbo nucifera HOM05D006257 ORTHO05D007708 6.2e-41 171.8 180 61.1
Zm00001eb227340 Zea mays HOM05D006257 ORTHO05D007708 1.5e-39 167.2 168 53.0
Aqoxy7G03671 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 2.7e-36 156.4 199 50.8
Manes.14G133800 Manihot esculenta HOM05D006257 ORTHO05D007708 2.5e-34 149.8 125 65.6
Sed0003979 Sechium edule HOM05D006257 ORTHO05D007708 7.3e-34 148.3 195 53.8
BcaC03g16142 Brassica carinata HOM05D006257 ORTHO05D007708 2.4e-32 143.3 140 62.1
Psat4g037320 Pisum sativum HOM05D006257 ORTHO05D007708 5.8e-31 138.7 125 63.2
SMO111G0154 Selaginella moellendorffii HOM05D006257 ORTHO05D007708 1.7e-30 137.1 145 50.3
A02p24830 Brassica napus HOM05D006257 ORTHO05D007708 4.9e-30 135.6 128 60.2
Mapoly0099s0035 Marchantia polymorpha HOM05D006257 ORTHO05D007708 4.9e-30 135.6 217 41.0
BraA02t07471Z Brassica rapa HOM05D007780 ORTHO05D000140 1.2e-28 131.0 128 57.8
AagrBONN_evm.TU.Sc2ySwM_344.2604 Anthoceros agrestis HOM05D006257 ORTHO05D007708 3.5e-28 129.4 189 42.9
Pp3c8_15020 Physcomitrium patens HOM05D006257 ORTHO05D007708 1.5e-26 124.0 145 48.3
SEGI_32211 Sequoiadendron giganteum HOM05D006257 ORTHO05D007708 1.5e-23 114.0 104 53.8
C02p39320 Brassica napus HOM05D006257 ORTHO05D007708 8.7e-19 98.2 75 69.3
Mapoly0522s0001 Marchantia polymorpha HOM05D006257 ORTHO05D007708 1.6e-17 94.0 106 48.1
Pp3c24_6770 Physcomitrium patens HOM05D006257 ORTHO05D007708 2.1e-17 93.6 174 36.8
FAN19G1291 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.6e-09 67.4 112 45.5
BcaB05g23639 Brassica carinata HOM05D006257 ORTHO05D007708 2.8e-09 66.6 77 53.2
Cre06.g256250 Chlamydomonas reinhardtii HOM05D006257 ORTHO05D007708 6.9e-08 62.0 156 32.7


User provided reference genes

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