Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g07070 Coffea canephora HOM05D007071 ORTHO05D008677 1.8e-149 532.7 300 100.0
Peaxi162Scf00645g00018 Petunia axillaris HOM05D007071 ORTHO05D008677 1.8e-61 240.4 294 49.0
Peaxi162Scf00425g00036 Petunia axillaris HOM05D007071 ORTHO05D008677 2.4e-61 240.0 294 49.0
Sopen01g021160 Solanum pennellii HOM05D007071 ORTHO05D008677 1.2e-60 237.7 300 48.0
MSTRG.5919 Avicennia marina HOM05D007071 ORTHO05D008677 2.7e-60 236.5 291 47.8
Nitab4.5_0000117g0100 Nicotiana tabacum HOM05D007071 ORTHO05D008677 2.7e-60 236.5 340 44.4
TWI77G0807 Tripterygium wilfordii HOM05D007071 ORTHO05D008677 1.0e-59 234.6 318 45.9
SGA_v2.0_scaffold31G12809 Striga asiatica HOM05D007071 ORTHO05D008677 3.8e-59 232.6 293 47.4
Dinv25088 Davidia involucrata HOM05D007071 ORTHO05D008677 7.3e-58 228.4 289 48.1
Gorai.006G146400 Gossypium raimondii HOM05D007071 ORTHO05D008677 3.6e-57 226.1 313 46.0
Sed0020351 Sechium edule HOM05D007071 ORTHO05D008677 1.8e-56 223.8 313 45.4
Atru.chr8.1251 Acer truncatum HOM05D007071 ORTHO05D008677 2.3e-56 223.4 285 47.0
Gohir.D09G127800 Gossypium hirsutum HOM05D007071 ORTHO05D008677 2.3e-56 223.4 312 46.5
Actinidia37784 Actinidia chinensis HOM05D007071 ORTHO05D008677 3.0e-56 223.0 316 44.9
Gohir.A09G131600 Gossypium hirsutum HOM05D007071 ORTHO05D008677 4.0e-56 222.6 314 45.9
MELO3C009585.2 Cucumis melo HOM05D007071 ORTHO05D008677 5.2e-56 222.2 321 44.2
Potri.016G064200 Populus trichocarpa HOM05D007071 ORTHO05D008677 8.9e-56 221.5 315 42.2
CsaV3_3G038410 Cucumis sativus L. HOM05D007071 ORTHO05D008677 1.5e-55 220.7 321 44.2
Cfa020101 Carpinus fangiana HOM05D007071 ORTHO05D008677 2.6e-55 219.9 292 45.5
Duzib093G1750 Durio zibethinus HOM05D007071 ORTHO05D008677 7.5e-55 218.4 313 44.7
CiPaw.09G025100 Carya illinoinensis HOM05D007071 ORTHO05D008677 1.7e-54 217.2 303 46.5
Lj1g0020560 Lotus japonicus HOM05D007071 ORTHO05D008677 2.9e-54 216.5 309 41.7
Migut.J00748 Erythranthe guttata HOM05D007071 ORTHO05D008677 4.9e-54 215.7 290 44.5
VMungo1383G1243 Vigna mungo HOM05D007071 ORTHO05D008677 1.8e-53 213.8 305 43.0
Cpa.g.sc222.1 Carica papaya HOM05D007071 ORTHO05D008677 2.4e-53 213.4 320 43.8
Aqoxy2G00613 Aquilegia oxysepala HOM05D007071 ORTHO05D008677 7.0e-53 211.8 319 42.3
CANSAT64G1821 Cannabis sativa HOM05D007071 ORTHO05D008677 7.0e-53 211.8 314 42.4
Glyma.19G203500 Glycine max HOM05D007071 ORTHO05D008677 7.0e-53 211.8 305 42.3
ECA248G1335 Erigeron canadensis HOM05D007071 ORTHO05D008677 1.2e-52 211.1 309 41.1
ClCG10G017880 Citrullus lanatus HOM05D007071 ORTHO05D008677 2.0e-52 210.3 378 38.4
vmacro07528 Vaccinium macrocarpon HOM05D007071 ORTHO05D008677 5.9e-52 208.8 330 42.1
HanXRQChr11g0347671 Helianthus annuus HOM05D007071 ORTHO05D008677 1.3e-51 207.6 295 42.7
Glyma.03G206000 Glycine max HOM05D007071 ORTHO05D008677 1.7e-51 207.2 308 40.9
THA.LOC104809942 Tarenaya hassleriana HOM05D007071 ORTHO05D008677 2.3e-51 206.8 313 40.6
Medtr7g107150 Medicago truncatula HOM05D007071 ORTHO05D008677 3.9e-51 206.1 291 43.0
Nitab4.5_0005508g0020 Nicotiana tabacum HOM05D007071 ORTHO05D008677 3.9e-51 206.1 277 45.5
Lsat_1_v5_gn_1_56481 Lactuca sativa HOM05D000137 ORTHO05D000503 2.5e-50 203.4 264 48.1
GSVIVG01022502001 Vitis vinifera HOM05D007071 ORTHO05D008677 4.3e-50 202.6 299 42.5
Manes.08G038400 Manihot esculenta HOM05D007071 ORTHO05D008677 7.3e-50 201.8 324 40.7
QL07p025881 Quercus lobata HOM05D007071 ORTHO05D008677 7.3e-50 201.8 297 42.8
Nn2g14444 Nelumbo nucifera HOM05D007071 ORTHO05D008677 9.5e-50 201.4 320 41.9
Prupe.7G088000 Prunus persica HOM05D007071 ORTHO05D008677 9.5e-50 201.4 311 43.1
Thhalv10014151m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 1.2e-49 201.1 305 42.3
MD14G1046200 Malus domestica HOM05D007071 ORTHO05D008677 1.2e-49 201.1 286 44.4
Sc01g0005210 Simmondsia chinensis HOM05D007071 ORTHO05D008677 1.2e-49 201.1 322 40.7
Carub.0006s0547 Capsella rubella HOM05D007071 ORTHO05D008677 1.6e-49 200.7 306 42.8
AL6G16680 Arabidopsis lyrata HOM05D007071 ORTHO05D008677 4.7e-49 199.1 307 42.3
Sp6g36270 Schrenkiella parvula HOM05D007071 ORTHO05D008677 8.0e-49 198.4 319 40.4
PGR004G1089 Punica granatum HOM05D007071 ORTHO05D008677 1.0e-48 198.0 312 42.3
Peaxi162Scf00414g00006 Petunia axillaris HOM05D007071 ORTHO05D008677 2.3e-48 196.8 288 44.1
Sabra16G0066300 Salix brachista HOM05D007071 ORTHO05D008677 2.3e-48 196.8 364 37.1
BolC9t59762H Brassica oleracea HOM05D007071 ORTHO05D008677 6.8e-48 195.3 313 39.6
AT5G06590 Arabidopsis thaliana HOM05D007071 ORTHO05D008677 8.9e-48 194.9 305 41.3
A10p29800 Brassica napus HOM05D007071 ORTHO05D008677 8.9e-48 194.9 311 39.5
C09p70180 Brassica napus HOM05D007071 ORTHO05D008677 8.9e-48 194.9 313 39.3
CARHR206610 Cardamine hirsuta HOM05D007071 ORTHO05D008677 1.2e-47 194.5 310 41.6
PSO339G2219 Papaver somniferum HOM05D007071 ORTHO05D008677 7.5e-47 191.8 319 39.2
Phvul.001G199700 Phaseolus vulgaris HOM05D007071 ORTHO05D008677 7.5e-47 191.8 304 41.1
Solyc01g056990.3 Solanum lycopersicum HOM05D007071 ORTHO05D008677 7.5e-47 191.8 252 47.2
Aa31sc291G40 Aethionema arabicum HOM05D007071 ORTHO05D008677 1.3e-46 191.0 308 41.6
BraA10t45019Z Brassica rapa HOM05D007071 ORTHO05D008677 1.3e-46 191.0 311 38.9
PGSC0003DMG400031498 Solanum tuberosum HOM05D007071 ORTHO05D008677 6.4e-46 188.7 261 44.8
Rhsim03G0057500 Rhododendron simsii HOM05D007071 ORTHO05D008677 1.9e-45 187.2 287 42.5
FvH4_6g21190 Fragaria vesca HOM05D007071 ORTHO05D008677 1.6e-44 184.1 308 39.9
RcHm_v2.0_Chr3g0477671 Rosa chinensis HOM05D007071 ORTHO05D008677 2.7e-44 183.3 309 40.1
MBI11_g24568_MAGBIO Magnolia biondii HOM05D007071 ORTHO05D008677 7.8e-44 181.8 362 36.5
TPR.G14411 Trifolium pratense HOM05D007071 ORTHO05D008677 2.3e-43 180.3 263 41.8
Psat3g026600 Pisum sativum HOM05D007071 ORTHO05D008677 6.6e-43 178.7 294 39.1
Thhalv10014358m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 7.3e-42 175.3 284 40.5
Ah.12g059560 Amaranthus hybridus HOM05D007071 ORTHO05D008677 2.1e-41 173.7 307 39.1
arahy.Tifrunner.gnm1.ann1.B8MRUG Arachis hypogaea HOM05D007071 ORTHO05D008677 2.3e-40 170.2 289 41.2
Oeu028127.1 Olea europaea HOM05D007071 ORTHO05D008677 2.3e-40 170.2 233 42.9
arahy.Tifrunner.gnm1.ann1.P13BQJ Arachis hypogaea HOM05D007071 ORTHO05D008677 6.8e-40 168.7 289 39.4
Hund10779 Selenicereus undatus HOM05D007071 ORTHO05D008677 2.0e-39 167.2 292 39.7
Lalb_Chr25g0287781 Lupinus albus HOM05D007071 ORTHO05D008677 1.3e-38 164.5 312 39.4
ATR0697G054 Amborella trichopoda HOM05D007071 ORTHO05D008677 3.7e-38 162.9 349 33.5
Haze_20090 Corylus avellana HOM05D007071 ORTHO05D008677 1.4e-37 161.0 224 43.3
EL10Ac5g11787 Beta vulgaris HOM05D007071 ORTHO05D008677 2.4e-37 160.2 272 42.3
Ciclev10012576m.g Citrus clementina HOM05D007071 ORTHO05D008677 7.1e-37 158.7 240 40.8
COL.COLO4_29462 Corchorus olitorius HOM05D007071 ORTHO05D008677 6.6e-35 152.1 259 39.4
FAN09G1879 Fragaria x ananassa HOM05D007071 ORTHO05D008677 3.3e-34 149.8 303 36.0
Thecc.05G182200 Theobroma cacao HOM05D007071 ORTHO05D008677 5.2e-32 142.5 177 47.5
FAN14G3447 Fragaria x ananassa HOM05D007071 ORTHO05D008677 8.9e-32 141.7 285 36.5
TAR633G1119 Trochodendron aralioides HOM05D007071 ORTHO05D008677 1.3e-30 137.9 175 44.0
AUR62036298 Chenopodium quinoa HOM05D007071 ORTHO05D008677 6.4e-30 135.6 307 34.5
DCAR_020676 Daucus carota HOM05D007071 ORTHO05D008677 9.2e-29 131.7 170 47.1
SEGI_27522 Sequoiadendron giganteum HOM05D007071 ORTHO05D008677 1.7e-27 127.5 358 27.1
AUR62038410 Chenopodium quinoa HOM05D000573 ORTHO05D008677 3.0e-27 126.7 307 32.6
CSS0047921 Camellia sinensis var. sinensis HOM05D007071 ORTHO05D008677 2.5e-26 123.6 236 37.7
Eucgr.A02532 Eucalyptus grandis HOM05D007071 ORTHO05D008677 7.3e-26 122.1 192 37.0
Gohir.A07G089166 Gossypium hirsutum HOM05D007071 ORTHO05D008677 1.5e-23 114.4 77 72.7
Gorai.007G240500 Gossypium raimondii HOM05D007071 ORTHO05D008677 4.9e-22 109.4 176 42.0
SHI31768 Sapria himalayana HOM05D007071 ORTHO05D008677 2.1e-20 104.0 89 56.2
CDE10G1223 Ceratophyllum demersum HOM05D007071 ORTHO05D008677 1.3e-19 101.3 181 36.5
Eucgr.C00285 Eucalyptus grandis HOM05D007071 ORTHO05D008677 3.0e-19 100.1 92 59.8
Zm00001eb134480 Zea mays HOM05D007071 ORTHO05D008677 3.3e-18 96.7 240 30.4
Gohir.A06G128402 Gossypium hirsutum HOM05D007071 ORTHO05D008677 4.9e-14 82.8 155 35.5
MD12G1047800 Malus domestica HOM05D007071 ORTHO05D008677 1.1e-13 81.6 86 51.2
AagrBONN_evm.TU.Sc2ySwM_117.1490 Anthoceros agrestis HOM05D007071 ORTHO05D008677 2.4e-13 80.5 343 23.0
Eucgr.A02531 Eucalyptus grandis HOM05D007071 ORTHO05D008677 3.2e-13 80.1 75 57.3
PGSC0003DMG400019076 Solanum tuberosum HOM05D007071 ORTHO05D008677 4.6e-12 76.3 70 55.7
TPR.G40805 Trifolium pratense HOM05D007071 ORTHO05D008677 2.3e-11 73.9 65 55.4
Gohir.A07G056200 Gossypium hirsutum HOM05D007071 ORTHO05D008677 1.5e-10 71.2 130 37.7
CSS0001330 Camellia sinensis var. sinensis HOM05D007071 ORTHO05D008677 6.9e-08 62.4 65 49.2
Pp3c26_10880 Physcomitrium patens HOM05D007071 ORTHO05D008677 1.2e-07 61.6 406 23.2
SMO165G0174 Selaginella moellendorffii HOM05D007071 ORTHO05D008677 1.2e-07 61.6 81 38.3
Actinidia03957 Actinidia chinensis HOM05D002116 ORTHO05D002438 5.8e-07 59.3 41 73.2
Pp3c4_24350 Physcomitrium patens HOM05D007071 ORTHO05D008677 7.6e-07 58.9 91 39.6


User provided reference genes

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