Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g05130 Coffea canephora HOM05D007410 ORTHO05D009500 4.8e-104 383.3 818 100.0
Migut.J00989 Erythranthe guttata HOM05D007410 ORTHO05D009500 2.8e-35 154.8 126 65.1
Oeu023854.1 Olea europaea HOM05D007410 ORTHO05D009500 1.5e-33 149.1 178 51.7
Oeu058028.1 Olea europaea HOM05D007410 ORTHO05D009500 2.6e-33 148.3 125 60.8
Nitab4.5_0026813g0010 Nicotiana tabacum HOM05D007410 ORTHO05D009500 6.4e-32 143.7 143 55.9
Dinv34010 Davidia involucrata HOM05D007410 ORTHO05D009500 1.6e-30 139.0 193 49.7
Nitab4.5_0001290g0100 Nicotiana tabacum HOM05D007410 ORTHO05D009500 2.1e-30 138.7 146 53.4
Nitab4.5_0005621g0120 Nicotiana tabacum HOM05D007410 ORTHO05D009500 1.0e-29 136.3 129 58.1
PGSC0003DMG400004719 Solanum tuberosum HOM05D007410 ORTHO05D009500 3.3e-28 131.3 164 50.0
SGA_v2.0_scaffold40G15416 Striga asiatica HOM05D007410 ORTHO05D009500 1.6e-27 129.0 131 53.4
Sopen12g034470 Solanum pennellii HOM05D007410 ORTHO05D009500 2.1e-27 128.6 172 48.3
Peaxi162Scf00802g00013 Petunia axillaris HOM05D007410 ORTHO05D009500 2.8e-27 128.3 180 45.0
Rhsim03G0082200 Rhododendron simsii HOM05D007410 ORTHO05D009500 8.1e-27 126.7 168 45.8
Dinv39608 Davidia involucrata HOM05D007410 ORTHO05D009500 1.1e-26 126.3 175 67.4
Solyc12g099840.1 Solanum lycopersicum HOM05D007410 ORTHO05D009500 1.4e-26 125.9 161 47.2
SGA_v2.0_scaffold75G24801 Striga asiatica HOM05D007410 ORTHO05D009500 5.8e-25 120.6 131 50.4
Haze_19526 Corylus avellana HOM05D007410 ORTHO05D009500 7.6e-25 120.2 165 46.7
DCAR_020784 Daucus carota HOM05D007410 ORTHO05D009500 7.6e-25 120.2 140 47.1
QL02p025248 Quercus lobata HOM05D007410 ORTHO05D009500 9.9e-25 119.8 184 42.4
Hma1.2p1_0084F.1_g043130 Hydrangea macrophylla HOM05D007410 ORTHO05D009500 8.4e-24 116.7 123 56.1
CSS0026121 Camellia sinensis var. sinensis HOM05D007410 ORTHO05D009500 1.9e-23 115.5 173 67.1
MD14G1014400 Malus domestica HOM05D007410 ORTHO05D009500 7.1e-23 113.6 134 49.3
Cfa016527 Carpinus fangiana HOM05D007410 ORTHO05D009500 2.1e-22 112.1 165 44.2
HanXRQChr17g0534281 Helianthus annuus HOM05D007410 ORTHO05D009500 6.0e-22 110.5 155 42.6
Prupe.7G119000 Prunus persica HOM05D007410 ORTHO05D009500 6.0e-22 110.5 199 39.7
TAR365G0607 Trochodendron aralioides HOM05D007410 ORTHO05D009500 6.0e-22 110.5 177 41.2
MD12G1016300 Malus domestica HOM05D007410 ORTHO05D009500 7.8e-22 110.2 134 47.8
Eucgr.A01557 Eucalyptus grandis HOM05D007410 ORTHO05D009500 1.0e-21 109.8 180 44.4
CAN.G575.91 Capsicum annuum HOM05D007410 ORTHO05D009500 1.7e-21 109.0 164 42.7
TWI60G0552 Tripterygium wilfordii HOM05D007410 ORTHO05D009500 5.6e-20 104.0 170 40.0
DCAR_013956 Daucus carota HOM05D007410 ORTHO05D009500 1.3e-19 102.8 161 42.9
RcHm_v2.0_Chr3g0471971 Rosa chinensis HOM05D007410 ORTHO05D009500 1.3e-19 102.8 186 41.4
HanXRQChr17g0535541 Helianthus annuus HOM05D007410 ORTHO05D009500 1.6e-19 102.4 156 40.4
Atru.BG.129.p Acer truncatum HOM05D007410 ORTHO05D009500 6.2e-19 100.5 120 48.3
Sc18g0006010 Simmondsia chinensis HOM05D007410 ORTHO05D009500 6.9e-18 97.1 129 43.4
FAN02G1401 Fragaria x ananassa HOM05D007410 ORTHO05D009500 1.2e-17 96.3 157 42.0
FAN14G2442 Fragaria x ananassa HOM05D007410 ORTHO05D009500 9.9e-17 93.2 138 44.9
FvH4_6g17750 Fragaria vesca HOM05D007410 ORTHO05D009500 2.9e-16 91.7 138 44.2
Lj9E304T4 Lonicera japonica HOM05D007410 ORTHO05D009500 6.4e-16 90.5 171 37.4
AUR62013683 Chenopodium quinoa HOM05D007410 ORTHO05D009500 5.4e-15 87.4 172 70.9
FAN09G1720 Fragaria x ananassa HOM05D007410 ORTHO05D009500 5.4e-15 87.4 129 44.2
Manes.09G058000 Manihot esculenta HOM05D007410 ORTHO05D009500 5.4e-15 87.4 171 62.6
Migut.A01169 Erythranthe guttata HOM05D007410 ORTHO05D009500 7.1e-15 87.0 179 70.4
FAN05G1927 Fragaria x ananassa HOM05D007410 ORTHO05D009500 9.3e-15 86.7 157 40.1
Cpa.g.sc117.70 Carica papaya HOM05D007410 ORTHO05D009500 1.6e-14 85.9 179 70.4
Duzib093G0520 Durio zibethinus HOM05D007410 ORTHO05D009500 1.6e-14 85.9 173 64.2
PGR004G1775 Punica granatum HOM05D007410 ORTHO05D009500 2.7e-14 85.1 160 35.0
Carub.0006s1061 Capsella rubella HOM05D007410 ORTHO05D009500 6.0e-14 84.0 176 35.8
Aqoxy1G00955 Aquilegia oxysepala HOM05D007410 ORTHO05D009500 7.9e-14 83.6 127 40.2
FAN09G0790 Fragaria x ananassa HOM05D007410 ORTHO05D009500 7.9e-14 83.6 168 63.1
AUR62004183 Chenopodium quinoa HOM05D007410 ORTHO05D009500 1.0e-13 83.2 180 32.8
Sabra10G0194300 Salix brachista HOM05D001909 ORTHO05D007079 1.0e-13 83.2 171 64.3
Potri.010G249800 Populus trichocarpa HOM05D007410 ORTHO05D009500 1.3e-13 82.8 167 37.1
Atru.chr12.1030 Acer truncatum HOM05D007410 ORTHO05D009500 3.0e-13 81.6 149 38.9
EL10Ac1g00861 Beta vulgaris HOM05D007410 ORTHO05D009500 3.0e-13 81.6 181 32.0
Sp6g31520 Schrenkiella parvula HOM05D007410 ORTHO05D009500 6.7e-13 80.5 166 34.9
Nn8g39918 Nelumbo nucifera HOM05D007410 ORTHO05D009500 3.3e-12 78.2 173 35.3
CANSAT80G0494 Cannabis sativa HOM05D007410 ORTHO05D009500 4.3e-12 77.8 165 35.2
Aa31LG3G15130 Aethionema arabicum HOM05D007410 ORTHO05D009500 1.6e-11 75.9 145 33.1
CARHR201020 Cardamine hirsuta HOM05D007410 ORTHO05D009500 2.1e-11 75.5 159 32.7
Actinidia39878 Actinidia chinensis HOM05D007410 ORTHO05D009500 3.7e-11 74.7 55 56.4
AT5G12100 Arabidopsis thaliana HOM05D007410 ORTHO05D009500 3.7e-11 74.7 151 33.1
ClCG05G007520 Citrullus lanatus HOM05D007410 ORTHO05D009500 1.8e-10 72.4 157 32.5
BolC9t59308H Brassica oleracea HOM05D007410 ORTHO05D009500 3.1e-10 71.6 162 33.3
Lj9P304T66 Lonicera japonica HOM05D007410 ORTHO05D009500 3.1e-10 71.6 168 69.0
BraA10t44635Z Brassica rapa HOM05D007410 ORTHO05D009500 6.9e-10 70.5 128 36.7
Gohir.D01G198900 Gossypium hirsutum HOM05D007410 ORTHO05D009500 6.9e-10 70.5 155 32.9
COL.COLO4_29826 Corchorus olitorius HOM05D007410 ORTHO05D009500 9.0e-10 70.1 59 55.9
Sed0018174 Sechium edule HOM05D007410 ORTHO05D009500 9.0e-10 70.1 171 34.5
Gorai.002G243300 Gossypium raimondii HOM05D007410 ORTHO05D009500 1.2e-09 69.7 155 32.3
A10p25700 Brassica napus HOM05D007410 ORTHO05D009500 3.4e-09 68.2 163 33.7
VMungo1383G0444 Vigna mungo HOM05D007410 ORTHO05D009500 3.4e-09 68.2 141 34.0
CiPaw.09G007900 Carya illinoinensis HOM05D007410 ORTHO05D009500 5.8e-09 67.4 122 41.0
Gohir.A01G210000 Gossypium hirsutum HOM05D007410 ORTHO05D009500 5.8e-09 67.4 155 32.3
Ah.05g174660 Amaranthus hybridus HOM05D007410 ORTHO05D009500 1.3e-08 66.2 159 69.2
C09p64770 Brassica napus HOM05D007410 ORTHO05D009500 1.7e-08 65.9 128 34.4
Atru.chr12.1036 Acer truncatum HOM05D007410 ORTHO05D009500 2.9e-08 65.1 71 43.7
BcaNung06328 Brassica carinata HOM05D007410 ORTHO05D009500 2.9e-08 65.1 167 32.3
MELO3C006839.2 Cucumis melo HOM05D007410 ORTHO05D009500 2.9e-08 65.1 143 32.2
Lalb_Chr01g0018371 Lupinus albus HOM05D007410 ORTHO05D009500 3.8e-08 64.7 170 56.5
SHI27720 Sapria himalayana HOM05D007410 ORTHO05D009500 3.8e-08 64.7 148 37.8
Glyma.03G190300 Glycine max HOM05D007410 ORTHO05D009500 4.9e-08 64.3 141 32.6
Glyma.19G190733 Glycine max HOM05D007410 ORTHO05D009500 4.9e-08 64.3 165 56.4
Lj1g0017625 Lotus japonicus HOM05D007410 ORTHO05D009500 8.4e-08 63.5 117 35.0
Phvul.001G185900 Phaseolus vulgaris HOM05D007410 ORTHO05D009500 1.1e-07 63.2 141 33.3
Ciclev10033972m.g Citrus clementina HOM05D007410 ORTHO05D009500 1.9e-07 62.4 107 38.3
Glyma.19G190667 Glycine max HOM05D007410 ORTHO05D009500 1.9e-07 62.4 135 33.3
CsaV3_3G016400 Cucumis sativus L. HOM05D007410 ORTHO05D009500 5.5e-07 60.8 155 31.6
Actinidia11327 Actinidia chinensis HOM05D007410 ORTHO05D019476 3.5e-06 58.2 44 56.8
Medtr7g103600 Medicago truncatula HOM05D007410 ORTHO05D009500 6.0e-06 57.4 164 59.1
Ca_08961_v3 Cicer arietinum L. HOM05D007410 ORTHO05D009500 7.9e-06 57.0 159 61.0


User provided reference genes

Program Settings