Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g04870 Coffea canephora HOM05D003151 ORTHO05D003723 5.3e-116 421.0 210 100.0
Cc06_g11280 Coffea canephora HOM05D003151 ORTHO05D003723 2.2e-29 133.3 74 87.8
CSS0011012 Camellia sinensis var. sinensis HOM05D003151 ORTHO05D003723 2.0e-09 67.0 85 43.5
CSS0013498 Camellia sinensis var. sinensis HOM05D003151 ORTHO05D003723 2.0e-09 67.0 85 43.5
Dinv42311 Davidia involucrata HOM05D003151 ORTHO05D003723 7.4e-09 65.1 54 61.1
Dinv36756 Davidia involucrata HOM05D003151 ORTHO05D003723 9.7e-09 64.7 54 61.1
Hma1.2p1_0800F.1_g220060 Hydrangea macrophylla HOM05D003151 ORTHO05D003723 1.3e-08 64.3 57 56.1
vmacro06284 Vaccinium macrocarpon HOM05D003151 ORTHO05D003723 1.7e-08 63.9 53 58.5
Cpa.g.c31168 Carica papaya HOM05D003151 ORTHO05D003723 2.8e-08 63.2 69 46.4
Nitab4.5_0010222g0030 Nicotiana tabacum HOM05D003151 ORTHO05D003723 4.8e-08 62.4 54 61.1
Peaxi162Scf01318g00001 Petunia axillaris HOM05D003151 ORTHO05D003723 4.8e-08 62.4 53 62.3
Nitab4.5_0006935g0010 Nicotiana tabacum HOM05D003151 ORTHO05D003723 1.8e-07 60.5 54 59.3
CAN.G371.125 Capsicum annuum HOM05D003151 ORTHO05D003723 2.4e-07 60.1 54 59.3
Peaxi162Scf00354g00026 Petunia axillaris HOM05D003151 ORTHO05D003723 4.1e-07 59.3 92 37.0
Nn8g38896 Nelumbo nucifera HOM05D003151 ORTHO05D003723 5.3e-07 58.9 62 51.6
CAN.G771.2 Capsicum annuum HOM05D003151 ORTHO05D003723 7.0e-07 58.5 54 57.4
Sopen07g011620 Solanum pennellii HOM05D003151 ORTHO05D003723 9.1e-07 58.2 83 44.6
SGA_v2.0_scaffold62G21599 Striga asiatica HOM05D003151 ORTHO05D003723 9.1e-07 58.2 86 44.2
ECA234G2307 Erigeron canadensis HOM05D003151 ORTHO05D003723 1.2e-06 57.8 54 50.0
Oeu006976.1 Olea europaea HOM05D003151 ORTHO05D003723 1.2e-06 57.8 54 61.1
PGSC0003DMG400007756 Solanum tuberosum HOM05D003151 ORTHO05D003723 1.5e-06 57.4 61 52.5
Thecc.09G091100 Theobroma cacao HOM05D003151 ORTHO05D003723 5.9e-06 55.5 61 47.5
MSTRG.17772 Avicennia marina HOM05D003151 ORTHO05D003723 7.7e-06 55.1 84 40.5
MSTRG.6051 Avicennia marina HOM05D003151 ORTHO05D003723 7.7e-06 55.1 91 40.7
Nn1g08912 Nelumbo nucifera HOM05D003151 ORTHO05D003723 7.7e-06 55.1 55 47.3
Solyc07g021750.1 Solanum lycopersicum HOM05D003151 ORTHO05D003723 7.7e-06 55.1 83 43.4
GSVIVG01015216001 Vitis vinifera HOM05D003151 ORTHO05D003723 7.7e-06 55.1 40 65.0


User provided reference genes

Program Settings