Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g04250 Coffea canephora HOM05D006449 ORTHO05D007995 1.5e-42 175.6 81 100.0
SGA_v2.0_scaffold40G15520 Striga asiatica HOM05D006449 ORTHO05D007995 5.0e-38 160.6 77 92.2
GSVIVG01033644001 Vitis vinifera HOM05D006449 ORTHO05D007995 5.0e-38 160.6 77 93.5
SGA_v2.0_scaffold75G24848 Striga asiatica HOM05D006449 ORTHO05D007995 8.6e-38 159.8 77 92.2
MSTRG.5764 Avicennia marina HOM05D006449 ORTHO05D007995 1.1e-37 159.5 77 92.2
Nitab4.5_0000814g0040 Nicotiana tabacum HOM05D006449 ORTHO05D007995 2.5e-37 158.3 77 90.9
Lalb_Chr02g0155801 Lupinus albus HOM05D006449 ORTHO05D007995 4.2e-37 157.5 76 92.1
EL10Ac7g16636 Beta vulgaris HOM05D006449 ORTHO05D007995 5.5e-37 157.1 76 90.8
CiPaw.10G129500 Carya illinoinensis HOM05D006449 ORTHO05D007995 5.5e-37 157.1 78 89.7
Manes.09G065800 Manihot esculenta HOM05D006449 ORTHO05D007995 7.2e-37 156.8 76 89.5
Nn2g13802 Nelumbo nucifera HOM05D006449 ORTHO05D007995 7.2e-37 156.8 77 89.6
CANSAT80G0535 Cannabis sativa HOM05D006449 ORTHO05D007995 9.5e-37 156.4 74 93.2
Oeu041490.2 Olea europaea HOM05D006449 ORTHO05D007995 9.5e-37 156.4 77 89.6
Peaxi162Scf00311g00119 Petunia axillaris HOM05D006449 ORTHO05D007995 9.5e-37 156.4 78 87.2
CSS0018897 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 2.1e-36 155.2 76 90.8
CSS0028691 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 2.1e-36 155.2 76 90.8
QL07p043219 Quercus lobata HOM05D006449 ORTHO05D007995 2.1e-36 155.2 76 90.8
Nitab4.5_0003861g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 3.6e-36 154.5 76 88.2
Aqoxy1G01150 Aquilegia oxysepala HOM05D006449 ORTHO05D007995 4.7e-36 154.1 77 88.3
Hma1.2p1_0205F.1_g086990 Hydrangea macrophylla HOM05D006449 ORTHO05D007995 4.7e-36 154.1 76 90.8
Nn6g35286 Nelumbo nucifera HOM05D006449 ORTHO05D007995 4.7e-36 154.1 76 90.8
Rhsim03G0091200 Rhododendron simsii HOM05D006449 ORTHO05D007995 4.7e-36 154.1 76 90.8
ClCG04G009390 Citrullus lanatus HOM05D006449 ORTHO05D007995 6.1e-36 153.7 76 89.5
MELO3C024474.2 Cucumis melo HOM05D006449 ORTHO05D007995 6.1e-36 153.7 76 89.5
Glyma.10G055200 Glycine max HOM05D006449 ORTHO05D007995 6.1e-36 153.7 76 89.5
Peaxi162Scf00638g00414 Petunia axillaris HOM05D006449 ORTHO05D007995 6.1e-36 153.7 74 90.5
unitig_749.g14285 Utricularia gibba HOM05D006449 ORTHO05D007995 6.1e-36 153.7 77 87.0
Glyma.13G142300 Glycine max HOM05D006449 ORTHO05D007995 8.0e-36 153.3 76 89.5
Solyc09g008230.3 Solanum lycopersicum HOM05D006449 ORTHO05D007995 8.0e-36 153.3 76 86.8
Sopen09g003050 Solanum pennellii HOM05D006449 ORTHO05D007995 8.0e-36 153.3 76 86.8
PGSC0003DMG400003863 Solanum tuberosum HOM05D006449 ORTHO05D007995 8.0e-36 153.3 76 86.8
Actinidia08770 Actinidia chinensis HOM05D006449 ORTHO05D007995 1.0e-35 152.9 76 89.5
CsaV3_6G039970 Cucumis sativus L. HOM05D006449 ORTHO05D007995 1.4e-35 152.5 76 88.2
HanXRQChr01g0027751 Helianthus annuus HOM05D006449 ORTHO05D007995 1.4e-35 152.5 76 88.2
Lj5g0001377 Lotus japonicus HOM05D006449 ORTHO05D007995 1.4e-35 152.5 76 90.8
AUR62040339 Chenopodium quinoa HOM05D006449 ORTHO05D007995 1.8e-35 152.1 74 89.2
AUR62042508 Chenopodium quinoa HOM05D006449 ORTHO05D007995 1.8e-35 152.1 74 89.2
TWI74G0214 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 1.8e-35 152.1 76 88.2
HanXRQChr15g0491571 Helianthus annuus HOM05D006449 ORTHO05D007995 2.3e-35 151.8 76 88.2
Sabra06G0098200 Salix brachista HOM05D006449 ORTHO05D007995 2.3e-35 151.8 78 89.7
TWI77G0881 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 2.3e-35 151.8 76 88.2
DCAR_015000 Daucus carota HOM05D006449 ORTHO05D007995 3.0e-35 151.4 74 89.2
Lsat_1_v5_gn_1_52340 Lactuca sativa HOM05D006449 ORTHO05D007995 3.0e-35 151.4 76 85.5
PGR004G0793 Punica granatum HOM05D006449 ORTHO05D007995 3.0e-35 151.4 72 94.4
SEGI_04945 Sequoiadendron giganteum HOM05D006449 ORTHO05D007995 4.0e-35 151.0 77 85.7
CAN.G900.29 Capsicum annuum HOM05D006449 ORTHO05D007995 6.8e-35 150.2 76 84.2
ECA248G0052 Erigeron canadensis HOM05D006449 ORTHO05D007995 6.8e-35 150.2 72 93.1
COL.COLO4_26955 Corchorus olitorius HOM05D006449 ORTHO05D007995 1.2e-34 149.4 76 86.8
Psat6g074040 Pisum sativum HOM05D006449 ORTHO05D007995 1.5e-34 149.1 76 85.5
Sed0015731 Sechium edule HOM05D006449 ORTHO05D007995 2.0e-34 148.7 73 89.0
Potri.016G093500 Populus trichocarpa HOM05D006449 ORTHO05D007995 3.4e-34 147.9 79 87.3
Sabra16G0098600 Salix brachista HOM05D006449 ORTHO05D007995 3.4e-34 147.9 79 87.3
Thecc.05G067500 Theobroma cacao HOM05D006449 ORTHO05D007995 3.4e-34 147.9 76 86.8
TPR.G11267 Trifolium pratense HOM05D006449 ORTHO05D007995 3.4e-34 147.9 76 85.5
Gorai.002G246900 Gossypium raimondii HOM05D006449 ORTHO05D007995 4.4e-34 147.5 76 86.8
Duzib093G0849 Durio zibethinus HOM05D006449 ORTHO05D007995 7.5e-34 146.7 76 85.5
Phvul.007G219000 Phaseolus vulgaris HOM05D006449 ORTHO05D007995 7.5e-34 146.7 72 90.3
Atru.chr8.1798 Acer truncatum HOM05D006449 ORTHO05D007995 9.8e-34 146.4 78 84.6
VMungo0720G3134 Vigna mungo HOM05D006449 ORTHO05D007995 1.3e-33 146.0 72 88.9
MD12G1112600 Malus domestica HOM05D006449 ORTHO05D007995 1.7e-33 145.6 74 86.5
Ca_11505_v3 Cicer arietinum L. HOM05D006449 ORTHO05D007995 2.2e-33 145.2 76 82.9
Gohir.A01G213500 Gossypium hirsutum HOM05D006449 ORTHO05D007995 2.2e-33 145.2 75 86.7
Hund26578 Selenicereus undatus HOM05D006449 ORTHO05D007995 2.2e-33 145.2 79 82.3
Hund20380 Selenicereus undatus HOM05D006449 ORTHO05D007995 2.8e-33 144.8 79 82.3
Potri.006G124100 Populus trichocarpa HOM05D006449 ORTHO05D007995 3.7e-33 144.4 72 90.3
CDE09G0874 Ceratophyllum demersum HOM05D006449 ORTHO05D007995 6.3e-33 143.7 78 83.3
ATR0219G007 Amborella trichopoda HOM05D006449 ORTHO05D007995 8.3e-33 143.3 76 81.6
A05p08950 Brassica napus HOM05D006449 ORTHO05D007995 8.3e-33 143.3 78 80.8
C04p11060 Brassica napus HOM05D006449 ORTHO05D007995 8.3e-33 143.3 78 80.8
BolC4t22754H Brassica oleracea HOM05D006449 ORTHO05D007995 8.3e-33 143.3 78 80.8
BraA05t19857Z Brassica rapa HOM05D006449 ORTHO05D007995 8.3e-33 143.3 78 80.8
MD00G1155400 Malus domestica HOM05D006449 ORTHO05D007995 8.3e-33 143.3 74 85.1
Medtr1g063190 Medicago truncatula HOM05D006449 ORTHO05D007995 8.3e-33 143.3 76 81.6
THA.LOC104823475 Tarenaya hassleriana HOM05D006449 ORTHO05D007995 8.3e-33 143.3 76 82.9
Gohir.D01G202200 Gossypium hirsutum HOM05D006449 ORTHO05D007995 1.1e-32 142.9 76 85.5
BcaB01g03807 Brassica carinata HOM05D006449 ORTHO05D007995 1.4e-32 142.5 78 79.5
BcaB02g09320 Brassica carinata HOM05D006449 ORTHO05D007995 1.8e-32 142.1 78 79.5
BcaC02g11815 Brassica carinata HOM05D006449 ORTHO05D007995 1.8e-32 142.1 78 79.5
Thhalv10017435m.g Eutrema salsugineum HOM05D006449 ORTHO05D007995 1.8e-32 142.1 75 81.3
AT2G36930 Arabidopsis thaliana HOM05D006449 ORTHO05D007995 4.1e-32 141.0 76 80.3
BcaC01g05620 Brassica carinata HOM05D006449 ORTHO05D007995 4.1e-32 141.0 78 78.2
C03p23890 Brassica napus HOM05D006449 ORTHO05D007995 4.1e-32 141.0 78 78.2
BolC3t14781H Brassica oleracea HOM05D006449 ORTHO05D007995 4.1e-32 141.0 78 78.2
RcHm_v2.0_Chr3g0470301 Rosa chinensis HOM05D006449 ORTHO05D007995 4.1e-32 141.0 72 90.3
FvH4_6g16440 Fragaria vesca HOM05D006449 ORTHO05D007995 9.2e-32 139.8 72 88.9
FAN05G0981 Fragaria x ananassa HOM05D006449 ORTHO05D007995 9.2e-32 139.8 72 88.9
FAN14G2797 Fragaria x ananassa HOM05D006449 ORTHO05D007995 9.2e-32 139.8 72 88.9
FAN14G3008 Fragaria x ananassa HOM05D006449 ORTHO05D007995 9.2e-32 139.8 72 88.9
A03p20330 Brassica napus HOM05D006449 ORTHO05D007995 1.2e-31 139.4 78 76.9
BraA03t11279Z Brassica rapa HOM05D006449 ORTHO05D007995 1.2e-31 139.4 78 76.9
AL4G33170 Arabidopsis lyrata HOM05D006449 ORTHO05D007995 1.6e-31 139.0 78 76.9
CARHR131400 Cardamine hirsuta HOM05D006449 ORTHO05D007995 1.6e-31 139.0 78 76.9
Sp4g19220 Schrenkiella parvula HOM05D006449 ORTHO05D007995 3.5e-31 137.9 78 76.9
FAN02G2429 Fragaria x ananassa HOM05D006449 ORTHO05D007995 4.5e-31 137.5 72 87.5
Carub.0004s1878 Capsella rubella HOM05D006449 ORTHO05D007995 1.0e-30 136.3 78 76.9
Mapoly0185s0018 Marchantia polymorpha HOM05D006449 ORTHO05D007995 1.0e-30 136.3 76 77.6
HPP92_025806 Vanilla planifolia HOM05D006449 ORTHO05D007995 1.0e-30 136.3 74 81.1
Zm00001eb038700 Zea mays HOM05D006449 ORTHO05D007995 1.7e-30 135.6 76 76.3
Aa31LG5G22150 Aethionema arabicum HOM05D006449 ORTHO05D007995 2.3e-30 135.2 76 76.3
Os08g0564500 Oryza sativa ssp. japonica HOM05D006449 ORTHO05D007995 6.6e-30 133.7 72 80.6
Pp3c13_22060 Physcomitrium patens HOM05D006449 ORTHO05D007995 2.3e-27 125.2 72 70.8
SMO144G0185 Selaginella moellendorffii HOM05D006449 ORTHO05D007995 1.2e-26 122.9 67 77.6
Cfa017617 Carpinus fangiana HOM05D006449 ORTHO05D007995 4.4e-26 120.9 74 77.0
TAR633G1413 Trochodendron aralioides HOM05D002509 ORTHO05D002758 2.1e-20 102.1 53 86.8
vmacro07293 Vaccinium macrocarpon HOM05D006449 ORTHO05D007995 1.2e-18 96.3 49 85.7
Sc20g0005520 Simmondsia chinensis HOM05D006449 ORTHO05D007995 2.0e-18 95.5 45 91.1
Nitab4.5_0029554g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 2.6e-18 95.1 50 80.0
Migut.J00654 Erythranthe guttata HOM05D006449 ORTHO05D007995 3.4e-18 94.7 45 86.7
arahy.Tifrunner.gnm1.ann1.9GBJ25 Arachis hypogaea HOM05D006449 ORTHO05D007995 7.5e-18 93.6 44 88.6
arahy.Tifrunner.gnm1.ann1.D9FX9P Arachis hypogaea HOM05D006449 ORTHO05D007995 7.5e-18 93.6 44 88.6
Oeu005023.1 Olea europaea HOM05D006449 ORTHO05D007995 1.3e-17 92.8 45 84.4
PSO063G3287 Papaver somniferum HOM05D006449 ORTHO05D007995 1.3e-17 92.8 75 58.7
PSO339G4301 Papaver somniferum HOM05D006449 ORTHO05D007995 1.3e-17 92.8 75 58.7
Haze_20546 Corylus avellana HOM05D006449 ORTHO05D007995 1.7e-17 92.4 44 86.4
Manes.08G011000 Manihot esculenta HOM05D006449 ORTHO05D007995 3.7e-17 91.3 53 77.4
Ciclev10013228m.g Citrus clementina HOM05D006449 ORTHO05D007995 1.1e-16 89.7 40 95.0
CBR_g8310 Chara braunii HOM05D006449 ORTHO05D007995 1.3e-14 82.8 51 68.6
Cre17.g734628 Chlamydomonas reinhardtii HOM05D006449 ORTHO05D007995 9.5e-13 76.6 77 42.9
MCO09G543 Micromonas commoda HOM05D006449 ORTHO05D007995 1.6e-12 75.9 78 44.9
PRCOL_00003735 Prasinoderma coloniale HOM05D006449 ORTHO05D007995 2.8e-12 75.1 68 48.5
HanXRQChr16g0526221 Helianthus annuus HOM05D006449 ORTHO05D007995 2.6e-10 68.6 30 96.7
MSTRG.19181 Avicennia marina HOM05D006449 ORTHO05D007995 3.7e-09 64.7 32 90.6
Lj3A986G82 Lonicera japonica HOM05D006449 ORTHO05D007995 1.1e-08 63.2 32 84.4
Thhalv10009663m.g Eutrema salsugineum HOM05D005081 ORTHO05D005506 1.4e-08 62.8 31 87.1
unitig_75.g29315 Utricularia gibba HOM05D006449 ORTHO05D007995 2.3e-06 55.5 25 96.0


User provided reference genes

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